BAC Information

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BAC

Clone NameB6Ng01-013O22
ChromosomeY (Build37)X (Build37)
Map Location 1,120,565 - 1,120,698115,247,906 - 115,248,836
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneZfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278
Downstream geneEG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013O22.bB6Ng01-013O22.g
ACCDH848623DH848624
length956933
definitionDH848623|Mus musculus domesticus DNA, BAC clone: B6Ng01-013O22, 5' end.DH848624|Mus musculus domesticus DNA, BAC clone: B6Ng01-013O22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(1,120,565 - 1,120,698)(115,247,906 - 115,248,836)
sequence
gaattctcaattctgaatatctatgctccaaatgcaaaggcagccacatt
tattaaagaaactttagtaaaactcaaagccaacattgcacttcaaacaa
taatagtgggagatttcaacacaccactttcatcaatggacagatcgtgg
aaacagaaacaaaacagggacatagtgaaactcatagaaggtatgaaaca
aatggagttaacagatatctacagaatattttatcctaaaacaaaaggat
atactttcttctcaacacctcatggtaccttctccaaaattgacaatata
cttggtcacaaaccaggcctaaacagatacaaaaatattgatattgtccc
aagcatcttatcagatcaccatgaactaaggctgatcttttttttttcat
tttttattaggtatttagctcatttacatttccaatactataccaaaagt
cccccatatccacccacccccactcccctacacactcactcccccttttt
ggccctggcgttcccctgtactggggcatataaagtttgtgtgtccaatg
ggcctctgtttccagtgatggccgactaggccatcttttgatacatatgc
agctagagtcaagagctccggggtactggttagttcataatgttgttcca
catatagggttgcagatccctttagctccatgggttctttctctagctcc
tcgattgggagccctgtgatccatccattagctgactgtgagcatccact
tctgtgtttgctaggccccggcatagtctcacaagagaaagctacatctg
ggatcctttcgataaaatcttactagtgtatgcaatggtgtcagcgtttg
gaagctgattatgggggtggatccctggatatggcagtctctgcatggtc
catcctttcatctcagctcaaactttgtctctgtactcttcatgggtgtt
ttgtac
gaattcaatgcagatgtcaactgatagtcagcaccccaactctaatggat
aaatcagaagtacaggtattggatgaaagactaagggaacattgatgaag
aggggagtggactctttgtaaagaacagaatgcaataaatacttttgtga
gactgtatcttctagcactagctacataaagaatatctcaacattgtcaa
aatcaatcaacattgtcaaaatcaatagctatgctatgagtaagaaagag
ggtaaatcttacctaatcccaaacttaacaaagacctacagacaagtagt
aaatgcagaaagtgtgagaattagcctgtcttagggatgaattccataat
tagttttctaatataaaagcgttagctataaaaccatatatatataacac
aaacaaaagctgcttatgactattgctgtcattacttatacagttatatg
ttatagtcattaattcctatctattatatttctttaatttctgatactgt
acttacataccaatttgagtgtatgagggggaaatagaaagatttgagga
gaggatacatgtgagataatagaaggaaaaagggaaagatggaagtgata
taattattttatttaaaatatgttttaaaagtgagtttatccttccaccc
agtcctttctgctggggcagactgctagcatgtctgctcccatgaagaca
ccataccctaagtgatcctagaggatctgctgtactgagagcagttggta
ataacactcccccaccaaatcccagagctgcctctaggagcccagtggac
tcctgacccaccaaaccccttgatcctctgaataccactccttgttcacc
tggtactttctgctggggtagactgctagccagtgtgcttccctgaaaac
accattatcctgagccatcccagaagatacact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1120565_1120698
seq2: B6Ng01-013O22.b_432_547

seq1  ATCTTTTTTTTTTTTTTTTAATTTTTTTTTCCATTTTTTATTAGGTATTT  50
      |||||||||||||                  |||||||||||||||||||
seq2  ATCTTTTTTTTTT------------------CATTTTTTATTAGGTATTT  32

seq1  AACTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATATCCACCCA  100
      | |||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGCTCATTTACATTTCCAATACTATACCAAAAGTCCCCCATATCCACCCA  82

seq1  CCCCCACTCCCCTGCCCACCCACTCCCCCTTTTT  134
      ||||||||||||| | ||| ||||||||||||||
seq2  CCCCCACTCCCCTACACACTCACTCCCCCTTTTT  116

seq1: chrX_115247906_115248836
seq2: B6Ng01-013O22.g_69_1001

seq1  GAATTCAATGCAGATGTCAACTGATAGTCAGCACCCCAACTCTAATGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCAGATGTCAACTGATAGTCAGCACCCCAACTCTAATGGAT  50

seq1  AAATCAGAAGTACAGGTATTGGATGAAAGACTAAGGGAACATTGATGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGAAGTACAGGTATTGGATGAAAGACTAAGGGAACATTGATGAAG  100

seq1  AGGGGAGTGGACTCTTTGTAAAGAACAGAATGCAATAAATACTTTTGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGTGGACTCTTTGTAAAGAACAGAATGCAATAAATACTTTTGTGA  150

seq1  GACTGTATCTTCTAGCACTAGCTACATAAAGAATATCTCAACATTGTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTATCTTCTAGCACTAGCTACATAAAGAATATCTCAACATTGTCAA  200

seq1  AATCAATCAACATTGTCAAAATCAATAGCTATGCTATGAGTAAGAAAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATCAACATTGTCAAAATCAATAGCTATGCTATGAGTAAGAAAGAG  250

seq1  GGTAAATCTTACCTAATCCCAAACTTAACAAAGACCTACAGACAAGTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATCTTACCTAATCCCAAACTTAACAAAGACCTACAGACAAGTAGT  300

seq1  AAATGCAGAAAGTGTGAGAATTAGCCTGTCTTAGGGATGAATTCCATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAGAAAGTGTGAGAATTAGCCTGTCTTAGGGATGAATTCCATAAT  350

seq1  TAGTTTTCTAATATAAAAGCGTTAGCTATAAAACCATATATATATAACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTCTAATATAAAAGCGTTAGCTATAAAACCATATATATATAACAC  400

seq1  AAACAAAAGCTGCTTATGACTATTGCTGTCATTACTTATACAGTTATATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAGCTGCTTATGACTATTGCTGTCATTACTTATACAGTTATATG  450

seq1  TTATAGTCATTAATTCCTATCTATTATATTTCTTTAATTTCTGATACTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTCATTAATTCCTATCTATTATATTTCTTTAATTTCTGATACTGT  500

seq1  ACTTACATACCAATTTGAGTGTATGAGGGGGAAATAGAAAGATTTGAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACATACCAATTTGAGTGTATGAGGGGGAAATAGAAAGATTTGAGGA  550

seq1  GAGGATACATGTGAGATAATAGAAGGAAAAAGGGAAAGATGGAAGTGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATACATGTGAGATAATAGAAGGAAAAAGGGAAAGATGGAAGTGATA  600

seq1  TAATTATTTTATTTAAAATATGTTTTAAAAGTGAGTTTATCCTTCCACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTTTATTTAAAATATGTTTTAAAAGTGAGTTTATCCTTCCACCC  650

seq1  AGTCCTTTCTGCTGGGGCAGACTGCTAGCATGTCTGCTCCCATGAAGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTTCTGCTGGGGCAGACTGCTAGCATGTCTGCTCCCATGAAGACA  700

seq1  CCATACCCTAAGTGATCCTAGAGGATCTGCTGTACTGAGAGCAGTTGGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACCCTAAGTGATCCTAGAGGATCTGCTGTACTGAGAGCAGTTGGTA  750

seq1  ATAACACTCCCCCACCAAATCCCAGAGCTGCCTCTAGGAGCCCAGTGGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACTCCCCCACCAAATCCCAGAGCTGCCTCTAGGAGCCCAGTGGAC  800

seq1  TCCTGACCCACCAAACCCC-TGATCCTCTGAATACCACTCCCTGTTCACC  849
      ||||||||||||||||||| ||||||||||||||||||||| ||||||||
seq2  TCCTGACCCACCAAACCCCTTGATCCTCTGAATACCACTCCTTGTTCACC  850

seq1  TGGTACTTTCTGCTGGGGTAGACTGCTAGCCAGTGTGCTTCCCTGAAAAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACTTTCTGCTGGGGTAGACTGCTAGCCAGTGTGCTTCCCTGAAAAC  900

seq1  ACCA-TATCCTGAGCCATCCCAGAAGATACACT  931
      |||| ||||||||||||||||||||||||||||
seq2  ACCATTATCCTGAGCCATCCCAGAAGATACACT  933