BAC Information

Click to search

BAC

Clone NameB6Ng01-014N20
ChromosomeX (Build37)5 (Build37)
Map Location 159,943,583 - 159,944,26118,084,511 - 18,084,575
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneReps2, LOC654358, LOC100041557, LOC667630, Rbbp7, 4932441K18Rik, LOC671250, Syap1, LOC100041607, Ctps2, S100g, LOC100040610, EG637051
Downstream geneGrpr, 1700045I19Rik, Ap1s2, Zrsr2, Car5b, Siah1b, Tmem27, Ace2, Bmx, Pir, Figf, Piga, Asb11, Asb9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014N20.bB6Ng01-014N20.g
ACCDH849286DH849287
length679960
definitionDH849286|Mus musculus domesticus DNA, BAC clone: B6Ng01-014N20, 5' end.DH849287|Mus musculus domesticus DNA, BAC clone: B6Ng01-014N20, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(159,943,583 - 159,944,261)(18,084,511 - 18,084,575)
sequence
gaattctctcattcatttctacagagccaataatcaaaaacctaattctt
ccatcctttgtcaccaactcacttacatgaaatgtgtgtctgcaatggct
tccacagcaataaagtcttttgaaatatttaaaagagtcaacaatagcta
tggatggatatggtttgattatctcccagggcttcattcttgagctacag
tccctggcgtgaggtaacaagaggatcaaatttaatccagctatgatatt
tagagttgggcccttcagatgatgaggattaaatacccccccatgattaa
atcctgatggttttatagaaagagggaaagaaatcagaaaacaaaatatc
atatattttcttttatttgcagtttctgggttttaagtcctatacaaaaa
catgtatgtatatgtaaaatgaaagtagaagtgaaagggtctagtgatac
aaaaagaacaaaagagaggagggaggggtaaggaaagggatggcatgatt
ggaggcaatatgctttgtgtatattataggaacatttaaaaaataaaatt
taaaacagaagctataaggaacacatacatatacctcacacacaccccat
atcttatacataacacaccatactctctctttctctctttctctctctct
ctctctctctctctctctctctctctctc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaactctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcattctggcggttcctca
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctctactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccttcaaccgaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgagataacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgagaa
caaaacacccttgggaaggagttacagagacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatacactagcaagattttattgaa
aggactcagatgtagctgtctcttgtgagactatgccggggcctagcaaa
cacagagtggatgctcacagtcagctaatggatggatcacagggctccat
gagagctaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_159943583_159944261
seq2: B6Ng01-014N20.b_49_727 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAAA  50

seq1  GAGAGAGTATGGTGTGTTATGTATAAGATATGGGGTGTGTGTGAGGTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGTATGGTGTGTTATGTATAAGATATGGGGTGTGTGTGAGGTATA  100

seq1  TGTATGTGTTCCTTATAGCTTCTGTTTTAAATTTTATTTTTTAAATGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTGTTCCTTATAGCTTCTGTTTTAAATTTTATTTTTTAAATGTTC  150

seq1  CTATAATATACACAAAGCATATTGCCTCCAATCATGCCATCCCTTTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAATATACACAAAGCATATTGCCTCCAATCATGCCATCCCTTTCCTT  200

seq1  ACCCCTCCCTCCTCTCTTTTGTTCTTTTTGTATCACTAGACCCTTTCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTCCCTCCTCTCTTTTGTTCTTTTTGTATCACTAGACCCTTTCACT  250

seq1  TCTACTTTCATTTTACATATACATACATGTTTTTGTATAGGACTTAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTTCATTTTACATATACATACATGTTTTTGTATAGGACTTAAAAC  300

seq1  CCAGAAACTGCAAATAAAAGAAAATATATGATATTTTGTTTTCTGATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAACTGCAAATAAAAGAAAATATATGATATTTTGTTTTCTGATTTC  350

seq1  TTTCCCTCTTTCTATAAAACCATCAGGATTTAATCATGGGGGGGTATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTCTTTCTATAAAACCATCAGGATTTAATCATGGGGGGGTATTTA  400

seq1  ATCCTCATCATCTGAAGGGCCCAACTCTAAATATCATAGCTGGATTAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCATCATCTGAAGGGCCCAACTCTAAATATCATAGCTGGATTAAAT  450

seq1  TTGATCCTCTTGTTACCTCACGCCAGGGACTGTAGCTCAAGAATGAAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCCTCTTGTTACCTCACGCCAGGGACTGTAGCTCAAGAATGAAGCC  500

seq1  CTGGGAGATAATCAAACCATATCCATCCATAGCTATTGTTGACTCTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGATAATCAAACCATATCCATCCATAGCTATTGTTGACTCTTTTA  550

seq1  AATATTTCAAAAGACTTTATTGCTGTGGAAGCCATTGCAGACACACATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTCAAAAGACTTTATTGCTGTGGAAGCCATTGCAGACACACATTT  600

seq1  CATGTAAGTGAGTTGGTGACAAAGGATGGAAGAATTAGGTTTTTGATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAAGTGAGTTGGTGACAAAGGATGGAAGAATTAGGTTTTTGATTAT  650

seq1  TGGCTCTGTAGAAATGAATGAGAGAATTC  679
      |||||||||||||||||||||||||||||
seq2  TGGCTCTGTAGAAATGAATGAGAGAATTC  679

seq1: chr5_18084511_18084575
seq2: B6Ng01-014N20.g_386_450 (reverse)

seq1  CTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTC  50
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTAGAGCATGTGTC  50

seq1  CTTCTTACCAGTTGG  65
      |||||||||||||||
seq2  CTTCTTACCAGTTGG  65