BAC Information

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BAC

Clone NameB6Ng01-015F01
ChromosomeX (Build37)
Map Location 146,213,215 - 146,356,182
singlet/doubletdoublet
Overlap geneOTTMUSG00000018988, LOC100039651, EG624568
Upstream geneEG666868, EG624260, LOC434865, EG624310, Ott, LOC666888, LOC100039598, LOC100039890, LOC100039612, EG666923, EG624378, LOC100039934, LOC100039629, LOC382243, EG666961, EG666968
Downstream geneLOC382244, LOC100039669, EG666982, EG624631, EG546387, LOC333588, Tmem29, LOC100040101, Alas2, Apex2, Pfkfb1, Tro, LOC100039716, Maged2, Itih5l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015F01.bB6Ng01-015F01.g
ACCDH849610DH849611
length1,032816
definitionDH849610|Mus musculus domesticus DNA, BAC clone: B6Ng01-015F01, 5' end.DH849611|Mus musculus domesticus DNA, BAC clone: B6Ng01-015F01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,355,139 - 146,356,182)(146,213,215 - 146,214,029)
sequence
gaattcaagttatcccatgcttcaagaccgaaaggaagatatcctgcagt
gagaacttgttaaaaaacaataccatggtaagtaaaaaattttaatttta
ctttaggcacatggctttggagacaagattacctgctgtttgtcagaccc
tagtcagaccttcttttctcatgcctgtcctgattctgttttctctaata
tgaatcctatataccatttcttttttaatcttgttttgttttaggagaaa
cggtctctgtgtatgacatctcagtctggtctcacatttacaaacatgtg
cttgcctctgcctcaccactgctaagtctcaagtcatgtgctaccatacc
ctgcaacttctccccatttctttcactactgtgtcttcctgtttccagct
cctggtctaactgtattcttaattctgtgcttccagtcacttactccctt
ctaacaagtataaagacactgctgttcctgcagcctatttaacttgtaaa
atattttatgccatattcacattcatattctcacagacagactcacacag
acacaaacacacccagattcacagtcacacacactcatagacacatacac
acagaatgcacagacacacagaaacacacacaaacacacacacactttca
ctgtttctttgtgtccccttttaatgctaacaaagttctgcttagtggat
tgccagggagcgttcaaggagtgaaagttggaaatgattgtgcagggagg
ggaaccaggattaagctgttgcttgtgggacaattcaagtctatatccag
gcaagggactgtaagactccaaaaattggggagacctcagctcaagtcct
ggacaagctggcttgtcatcccaatgactcatgagaaaaccacacctgat
gcaactgcaagagctttattatcacctagctgagacaaactcattctcct
ccaaaggaaagggatttcgcagattgtacagtagtggcctttaaagatag
ctgagaattggaaggagttgggagagttggat
gaattcagcatagcgacacattattggattgttcaaacatcagcagaaga
attacacgtacgtgtagggtgtcagagttctgtgagtagttgactcagtt
tagatagccctgtgacgtcctcacattcctctttatctttaaggttaagc
tgttcccaggattgttttaactatgaggcacacccgggtttgtttttctt
ttcctcagccccaggaagcctctaggctcacaaacaaccatcaatttctg
agtgctttgtattatgtgacttacaggtcttggaatttcatctttctttc
aatcctattttttctcacctctgacaccataaagttaaggacattgggtg
ggctgtttcctcaaacaacatgcattcattcccagcacatgtctcacaac
catcgattccagaagaattgagccctcttctggactgcactggcatcagg
cacacacttgagacacaggcaacagggaggcaaaataatcaaaaagatga
actgagaaatcaaaatgaaatgaaataaaacacattgagattagtgtgaa
cagaataatttagagcccgttaataatgatcaggatttcgctagtataca
acaaagaatagatttaagtaggtggttgaaaagcttgtgtcatgatgaag
ttcttcgaagttatccagaccagctgtggaactctgtgaaaatgcccctc
gggagcagagtagcaggcatgtgaggatagctgctttccccgcccctcac
ttgggattggaggcgtggtatggctaggcataggctgaaatctggccact
gaggcttctgctacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_146355139_146356182
seq2: B6Ng01-015F01.b_45_1076 (reverse)

seq1  ACCCAACTCCTCCCAACTCCTCCCAATTCCTCAGCTATCTTTTAAAAGCC  50
      | |||||| |||||||||||| |||||| |||||||||||||  |||| |
seq2  ATCCAACT-CTCCCAACTCCTTCCAATT-CTCAGCTATCTTT--AAAGGC  46

seq1  CACTACTGTTACCAATCTGGCCGAAATCCCTTTCCCTGTGGAGAGAAATG  100
      |||||||||   |||||||  |||||||||||| ||| |||||   ||||
seq2  CACTACTGT--ACAATCTG--CGAAATCCCTTT-CCTTTGGAGGAGAATG  91

seq1  AGTTTGTCCTCAGCTAGGTGATAATAAAGCCTCTTGCAGTTTGCATCAGG  150
      ||||||| ||||||||||||||||||||| ||||||||| ||||||||||
seq2  AGTTTGT-CTCAGCTAGGTGATAATAAAG-CTCTTGCAG-TTGCATCAGG  138

seq1  TGTGGTTTTCTCATGAGTCATTGGGATGAC-AGCCAGCTTGTCCCAGGAC  199
      |||||||||||||||||||||||||||||| ||||||||||| |||||||
seq2  TGTGGTTTTCTCATGAGTCATTGGGATGACAAGCCAGCTTGT-CCAGGAC  187

seq1  TTGAGCTGAGGTCTCCCCAATTTTTGGAGTCTTACAGTCCCTTGCCTGGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTGAGGTCTCCCCAATTTTTGGAGTCTTACAGTCCCTTGCCTGGA  237

seq1  TATAGACTTGAATTGTCCCACAAGCAACAGCTTAATCCTGGTTCCCCTCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGACTTGAATTGTCCCACAAGCAACAGCTTAATCCTGGTTCCCCTCC  287

seq1  CTGCACAATCATTTCCAACTTTCACTCCTTGAACGCTCCCTGGCAATCCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACAATCATTTCCAACTTTCACTCCTTGAACGCTCCCTGGCAATCCA  337

seq1  CTAAGCAGAACTTTGTTAGCATTAAAAGGGGACACAAAGAAACAGTGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCAGAACTTTGTTAGCATTAAAAGGGGACACAAAGAAACAGTGAAA  387

seq1  GTGTGTGTGTGTTTGTGTGTGTTTCTGTGTGTCTGTGCATTCTGTGTGTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTTTGTGTGTGTTTCTGTGTGTCTGTGCATTCTGTGTGTA  437

seq1  TGTGTCTATGAGTGTGTGTGACTGTGAATCTGGGTGTGTTTGTGTCTGTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTATGAGTGTGTGTGACTGTGAATCTGGGTGTGTTTGTGTCTGTG  487

seq1  TGAGTCTGTCTGTGAGAATATGAATGTGAATATGGCATAAAATATTTTAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTGTCTGTGAGAATATGAATGTGAATATGGCATAAAATATTTTAC  537

seq1  AAGTTAAATAGGCTGCAGGAACAGCAGTGTCTTTATACTTGTTAGAAGGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAAATAGGCTGCAGGAACAGCAGTGTCTTTATACTTGTTAGAAGGG  587

seq1  AGTAAGTGACTGGAAGCACAGAATTAAGAATACAGTTAGACCAGGAGCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGTGACTGGAAGCACAGAATTAAGAATACAGTTAGACCAGGAGCTG  637

seq1  GAAACAGGAAGACACAGTAGTGAAAGAAATGGGGAGAAGTTGCAGGGTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGGAAGACACAGTAGTGAAAGAAATGGGGAGAAGTTGCAGGGTAT  687

seq1  GGTAGCACATGACTTGAGACTTAGCAGTGGTGAGGCAGAGGCAAGCACAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCACATGACTTGAGACTTAGCAGTGGTGAGGCAGAGGCAAGCACAT  737

seq1  GTTTGTAAATGTGAGACCAGACTGAGATGTCATACACAGAGACCGTTTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTAAATGTGAGACCAGACTGAGATGTCATACACAGAGACCGTTTCT  787

seq1  CCTAAAACAAAACAAGATTAAAAAAGAAATGGTATATAGGATTCATATTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAACAAAACAAGATTAAAAAAGAAATGGTATATAGGATTCATATTA  837

seq1  GAGAAAACAGAATCAGGACAGGCATGAGAAAAGAAGGTCTGACTAGGGTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAACAGAATCAGGACAGGCATGAGAAAAGAAGGTCTGACTAGGGTC  887

seq1  TGACAAACAGCAGGTAATCTTGTCTCCAAAGCCATGTGCCTAAAGTAAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAACAGCAGGTAATCTTGTCTCCAAAGCCATGTGCCTAAAGTAAAA  937

seq1  TTAAAATTTTTTACTTACCATGGTATTGTTTTTTAACAAGTTCTCACTGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTTTTTACTTACCATGGTATTGTTTTTTAACAAGTTCTCACTGC  987

seq1  AGGATATCTTCCTTTCGGTCTTGAAGCATGGGATAACTTGAATTC  1044
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATCTTCCTTTCGGTCTTGAAGCATGGGATAACTTGAATTC  1032

seq1: chrX_146213215_146214029
seq2: B6Ng01-015F01.g_69_884

seq1  GAATTCAGCATAGCGACACATTATTGGATTGTTCAAACATCAGCAGAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATAGCGACACATTATTGGATTGTTCAAACATCAGCAGAAGA  50

seq1  ATTACACGTACGTGTAGGGTGTCAGAGTTCTGTGAGTAGTTGACTCAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACACGTACGTGTAGGGTGTCAGAGTTCTGTGAGTAGTTGACTCAGTT  100

seq1  TAGATAGCCCTGTGACGTCCTCACATTCCTCTTTATCTTTAAGGTTAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGCCCTGTGACGTCCTCACATTCCTCTTTATCTTTAAGGTTAAGC  150

seq1  TGTTCCCAGGATTGTTTTAACTATGAGGCACACCCGGGTTTGTTTTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCAGGATTGTTTTAACTATGAGGCACACCCGGGTTTGTTTTTCTT  200

seq1  TTCCTCAGCCCCAGGAAGCCTCTAGGCTCACAAACAACCATCAATTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCAGCCCCAGGAAGCCTCTAGGCTCACAAACAACCATCAATTTCTG  250

seq1  AGTGCTTTGTATTATGTGACTTACAGGTCTTGGAATTTCATCTTTCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTTGTATTATGTGACTTACAGGTCTTGGAATTTCATCTTTCTTTC  300

seq1  AATCCTATTTTTTCTCACCTCTGACACCATAAAGTTAAGGACATTGGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTATTTTTTCTCACCTCTGACACCATAAAGTTAAGGACATTGGGTG  350

seq1  GGCTGTTTCCTCAAACAACATGCATTCATTCCCAGCACATGTCTCACAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTTTCCTCAAACAACATGCATTCATTCCCAGCACATGTCTCACAAC  400

seq1  CATCGATTCCAGAAGAATTGAGCCCTCTTCTGGACTGCACTGGCATCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGATTCCAGAAGAATTGAGCCCTCTTCTGGACTGCACTGGCATCAGG  450

seq1  CACACACTTGAGACACAGGCAACAGGGAGGCAAAATAATCAAAAAGATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACTTGAGACACAGGCAACAGGGAGGCAAAATAATCAAAAAGATGA  500

seq1  ACTGAGAAATCAAAATGAAATGAAATAAAACACATTGAGATTAGTGTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGAAATCAAAATGAAATGAAATAAAACACATTGAGATTAGTGTGAA  550

seq1  CAGAATAATTTAGAGCCCGTTAATAATGATCAGGATTTCGCTAGTATACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATAATTTAGAGCCCGTTAATAATGATCAGGATTTCGCTAGTATACA  600

seq1  ACAAAGAATAGATTTAAGTAGGTGGTTGAAAAGCTTGTGTCATGATGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAATAGATTTAAGTAGGTGGTTGAAAAGCTTGTGTCATGATGAAG  650

seq1  TTCTTCGAAGTTATCCAGACCAGCTGTGGAACTCTGTGAAAATGCCCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCGAAGTTATCCAGACCAGCTGTGGAACTCTGTGAAAATGCCCCTC  700

seq1  GGGAGCAGAGTAGCAGGCATGTGAGGATAGCTGCTTTCCCCGCCCCTCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCAGAGTAGCAGGCATGTGAGGATAGCTGCTTTCCCCGCCCCTCAC  750

seq1  TTGGGATTGGAGGCGTGGTATGGCTAGGCATAGGCTGAAATCTGGCCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATTGGAGGCGTGGTATGGCTAGGCATAGGCTGAAATCTGGCCACT  800

seq1  GAGGC-TCTGCAACAG  815
      ||||| ||||| ||||
seq2  GAGGCTTCTGCTACAG  816