BAC Information

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BAC

Clone NameB6Ng01-015G09
ChromosomeX (Build37)
Map Location 118,141,811 - 118,142,818
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC674318, EG545741, LOC100039461, Pcdh11x, H2afb3, LOC245576
Downstream geneLOC385419, EG434907, EG245575
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015G09.bB6Ng01-015G09.g
ACCDH849666DH849667
length9531,004
definitionDH849666|Mus musculus domesticus DNA, BAC clone: B6Ng01-015G09, 5' end.DH849667|Mus musculus domesticus DNA, BAC clone: B6Ng01-015G09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttattcgatt
ttctgaagtccaccttcttgagttctttatatattttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
tcttgtcttattgacggtatcttttgccttgcataaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtactgcttttaatattctatcttttatttagtgcatttgttgt
tctgattattatgtgtctcgaggaatgtcttttctggttccagtctattt
ggagttctgtaggcttcttgtatgatcatgggcatctctttctttatgtt
tgggaagttttcttctattattttgtgaaaatatttgctggccctttaag
ttgaaaatcttcattctcatcaactcctattattccgtaggtttgtcttt
tcattgtgtcctggatttcctggatgttttgggttaggatccttttgcat
tttgtattttcttgactgtggtgtcgatgttcccattggaacttctgcac
ctg
gaattcaagaaattaaaaaaaagtgccttaaagctcatgtaaaccaagga
catacctgttagaaccaccaccaacattccagagtatcatgtgcaaccta
attctccaccctgccttcagtgattcagcaccagcatccatcatcacaat
gttacacattttgattcttatcttgtcatatatgtgcttgttccataccc
tcctataaaattctctcttcttcttcttcttcttcttcttcttcttcttc
ttcttcttcttcttcttcttcttcttcttcttcctcttcttcttcttcct
ttcttcctccctccatgcctcagaggtggccttttacatacacaccctac
acaataaatctcttgtatggggtctggggtctgttgcatggtatgatcct
tttttcattccttcacccttagataacagcaaaatccttacaacatccac
atgctaaatgtttacaaaaaaaaaaagcaggataaaaaccatgaagcaat
tcattaaaaaaaaatgatcagttatttgaccatttcaagaaatgacaggc
tcttatctaaacagtttcagttattaaaataagttgagattgcactgtta
tatgtaagttcacatgggccataattcttaggtcttttcattgatatcca
ataggatcacataaaacacattaccaaaaaaaaaaaaaaaagaataagtt
atatacactgataatggcattgttctgcacatgaaagataaatttcagaa
caatggaagattgttgcaatatatttgatcatactgtaaaaccctagatt
gtattatttactggagaagctgtttctagttctggtgtatctcagcacta
gcatatgcctttaatctgagagatttctgtttatagtaaacaaaattaat
aaagtcaccataaatcaaggggcagagcaacaccagttgacaggtgaata
tagggaatatatatagagagagtgagtttggaaactgaaaaagatttaga
ggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_118141811_118142818
seq2: B6Ng01-015G09.g_69_1072

seq1  GAATTCAAGAAATTAAAAAAAAGTGCCTTAAAGCTCATGTAAACCAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAAATTAAAAAAAAGTGCCTTAAAGCTCATGTAAACCAAGGA  50

seq1  CATACCTGTTAGAACCACCACCAACATTCCAGAGTATCATGTGCAACCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCTGTTAGAACCACCACCAACATTCCAGAGTATCATGTGCAACCTA  100

seq1  ATTCTCCACCCTGCCTTCAGTGATTCAGCACCAGCATCCATCATCACAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCACCCTGCCTTCAGTGATTCAGCACCAGCATCCATCATCACAAT  150

seq1  GTTACACATTTTGATTCTTATCTTGTCATATATGTGCTTGTTCCATACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACACATTTTGATTCTTATCTTGTCATATATGTGCTTGTTCCATACCC  200

seq1  TCCTATAAAATTCTC---TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC  247
      |||||||||||||||   ||||||||||||||||||||||||||||||||
seq2  TCCTATAAAATTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC  250

seq1  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCCT  300

seq1  TTCTTCCTCCCTCCATGCCTCAGAGGTGGCCTTTTACATACACACCCTAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTCCCTCCATGCCTCAGAGGTGGCCTTTTACATACACACCCTAC  350

seq1  ACAATAAATCTCTTGTATGGGGTCTGGGGTCTGTTGCATGGTATGATCCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAAATCTCTTGTATGGGGTCTGGGGTCTGTTGCATGGTATGATCCT  400

seq1  TTTTTCATTCCTTCACCCTTAGATAACAGCAAAATCCTTACAACATCCAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATTCCTTCACCCTTAGATAACAGCAAAATCCTTACAACATCCAC  450

seq1  ATGCTAAATGTTTACAAAAAAAAAAAGCAGGATAAAAACCATGAAGCAAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAAATGTTTACAAAAAAAAAAAGCAGGATAAAAACCATGAAGCAAT  500

seq1  TCATTAAAAAAAAATGATCAGTTATTTGACCATTTCAAGAAATGACAGGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAAAAAAAAATGATCAGTTATTTGACCATTTCAAGAAATGACAGGC  550

seq1  TCTTATCTAAACAGTTTCAGTTATTAAAATAAGTTGAGATTGCACTGTTA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATCTAAACAGTTTCAGTTATTAAAATAAGTTGAGATTGCACTGTTA  600

seq1  TATGTAAGTTCACATGGGCCATAATTCTTAGGTCTTTTCATTGATATCCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAAGTTCACATGGGCCATAATTCTTAGGTCTTTTCATTGATATCCA  650

seq1  ATAGGATCACATAAAACACATTACCAAAAAAAAAAAAAAAAGAATAAGTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGATCACATAAAACACATTACCAAAAAAAAAAAAAAAAGAATAAGTT  700

seq1  ATATACACTGATAATGGCATTGTTCTGCACATGAAAGATAAATTTCAGAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACACTGATAATGGCATTGTTCTGCACATGAAAGATAAATTTCAGAA  750

seq1  CAATGGAAGATTGTTGCAATATATTTGATCATACTGTAAAACCCTAGATT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGAAGATTGTTGCAATATATTTGATCATACTGTAAAACCCTAGATT  800

seq1  GTATTATTTACTGGAGAAGCTGTTTCTAGTTCTGGTGTATCTCAGCACTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTATTTACTGGAGAAGCTGTTTCTAGTTCTGGTGTATCTCAGCACTA  850

seq1  GCATATGCCTTTAATCTGAGAGATTTCTGTTTATAGTAAACAAAATTAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GCATATGCCTTTAATCTGAGAGATTTCTGTTTATAGTAAACAAAATT-AA  899

seq1  TAAAGTCAACCATAAATCAAGGGGCAGAGCAAACAACCAGTTGACAGGTT  947
      ||||||| ||||||||||||||||||||||||   ||||||||||||| |
seq2  TAAAGTC-ACCATAAATCAAGGGGCAGAGCAA--CACCAGTTGACAGG-T  945

seq1  GAATATA-GGAATATATATAGAGAGAGTGAGTATAGGAAAACTGAAAAGA  996
      ||||||| |||||||||||||||||||||||| |  | |||||||||| |
seq2  GAATATAGGGAATATATATAGAGAGAGTGAGTTT--GGAAACTGAAAA-A  992

seq1  GATTAAGAGGAA  1008
      |||| |||||||
seq2  GATTTAGAGGAA  1004