BAC Information

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BAC

Clone NameB6Ng01-015J01
ChromosomeX (Build37)
Map Location 139,253,645 - 139,342,473
singlet/doubletdoublet
Overlap geneTmem164, Ammecr1
Upstream geneLOC633596, EG666488, LOC622901, EG436234, EG622956, Gucy2f, LOC623006, LOC100039023, Nxt2, EG434858, Kcne1l, Acsl4, Ppia-psx_1100.1, EG633736, EG245651, LOC100039086, EG436235
Downstream geneRgag1, LOC209541, Chrdl1, Pak3, Capn6, Dcx
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015J01.bB6Ng01-015J01.g
ACCDH849784DH849785
length708653
definitionDH849784|Mus musculus domesticus DNA, BAC clone: B6Ng01-015J01, 5' end.DH849785|Mus musculus domesticus DNA, BAC clone: B6Ng01-015J01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(139,341,767 - 139,342,473)(139,253,645 - 139,254,296)
sequence
gaattcatggcaataacatgttattctagaatacaggagtgactgatact
tagtaaagacagggatgtggccagtcaccacacttacaaaatgattatct
tttttcccatctgtttcttgtacatagatgtctgctgagcagtggagtaa
ttatgtaggttacagcgggacctggagctccagtcttcactatgctgcct
ttgttgtgctctgcattctgagaaatttgcagtgggggtttagttctttc
taagaaatggagtaaccatataaaaagaagagattgttttgattttgagt
tttcttttattcggtgtgcacaagtggtgggtatatgtatgtgtgtatgt
gctgaaatggaataaccagaaaagcaagcaagggattgtttgcacattgc
aaatgttggcttgctgttaggttgtttgagatactgaaaattacaaacag
ctttgctttttttttctttgaaagggcttattcagattgagtatgtctgg
gtgactacttgcattgtaaactgatttttttggtgtgtgtttgataacat
aatcttttcatttttggtagagtggtatgggtttacaaccattgtataca
gcgtaattatgttttcccactcagaacaggctattctgtgctaattcttg
tgattgattattttagtaatacacatggctcattgtgaataattaaatta
aacgagtt
gaattctgggaaggggttgactacagtgctgttgctatagaagtagtggt
agaagctttgtaatggatgaggtgttccagggaagctaggtagcctgggg
agaggtgggaggggaaccagggcgtggaacccttgggataaagcaaccct
gagaaggtggacaaagaagaaaatgctgtcgggagattgtgggaagggtt
ggagcaacaggaggacagctgagttgtcctgaagcaaaaccagtagaaat
ttcacttggctagcagtagctaaaccacatgtgatctgagaagtgctgca
agatcaggtctctggagaagagtgcggggtgagggtctgtgagcatcgaa
aaaccaacggaagaggtttcccttcacagcactcccgttttcctctcctc
ggctctccttttcctcccttcctcccattgtctcctctccccgggactgg
ctccattcaaaccccacaacaagggcagtagtgtgagagagtgttgatgg
tattgagaaacaggggtcggtgaagtgcgaggtttttgacactgctgaga
tggtgcactggaaatgacagtgacaagaggactaggcatcgaaaatggaa
gaggagtctaggttttttgagcaccgcccataaaattgttttgtgcgtgt
gtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_139341767_139342473
seq2: B6Ng01-015J01.b_45_752 (reverse)

seq1  AACTCGTTTAATTTAATTATTCACAATGAGCCATGTGTATTACTAAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCGTTTAATTTAATTATTCACAATGAGCCATGTGTATTACTAAAATA  50

seq1  ATCAATCACAAGAATTAGCACAGAATAGCCTGTTCTGAGTGGGAAAACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATCACAAGAATTAGCACAGAATAGCCTGTTCTGAGTGGGAAAACAT  100

seq1  AATTACGCTGTATACAATGGTTGTAAACCCATACCACTCTACCAAAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACGCTGTATACAATGGTTGTAAACCCATACCACTCTACCAAAAATG  150

seq1  -AAAGATTATGTTATCAAACACACACCAAAAAAATCAGTTTACAATGCAA  199
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATTATGTTATCAAACACACACCAAAAAAATCAGTTTACAATGCAA  200

seq1  GTAGTCACCCAGACATACTCAATCTGAATAAGCCCTTTCAAAGAAAAAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTCACCCAGACATACTCAATCTGAATAAGCCCTTTCAAAGAAAAAAA  250

seq1  AAGCAAAGCTGTTTGTAATTTTCAGTATCTCAAACAACCTAACAGCAAGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAGCTGTTTGTAATTTTCAGTATCTCAAACAACCTAACAGCAAGC  300

seq1  CAACATTTGCAATGTGCAAACAATCCCTTGCTTGCTTTTCTGGTTATTCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTTGCAATGTGCAAACAATCCCTTGCTTGCTTTTCTGGTTATTCC  350

seq1  ATTTCAGCACATACACACATACATATACCCACCACTTGTGCACACCGAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGCACATACACACATACATATACCCACCACTTGTGCACACCGAAT  400

seq1  AAAAGAAAACTCAAAATCAAAACAATCTCTTCTTTTTATATGGTTACTCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAACTCAAAATCAAAACAATCTCTTCTTTTTATATGGTTACTCC  450

seq1  ATTTCTTAGAAAGAACTAAACCCCCACTGCAAATTTCTCAGAATGCAGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTAGAAAGAACTAAACCCCCACTGCAAATTTCTCAGAATGCAGAG  500

seq1  CACAACAAAGGCAGCATAGTGAAGACTGGAGCTCCAGGTCCCGCTGTAAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACAAAGGCAGCATAGTGAAGACTGGAGCTCCAGGTCCCGCTGTAAC  550

seq1  CTACATAATTACTCCACTGCTCAGCAGACATCTATGTACAAGAAACAGAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATAATTACTCCACTGCTCAGCAGACATCTATGTACAAGAAACAGAT  600

seq1  GGGAAAAAAGATAATCATTTTGTAAGTGTGGTGACTGGCCACATCCCTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAAAGATAATCATTTTGTAAGTGTGGTGACTGGCCACATCCCTGT  650

seq1  CTTTACTAAGTATCAGTCACTCCTGTATTCTAGAATAACATGTTATTGCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTAAGTATCAGTCACTCCTGTATTCTAGAATAACATGTTATTGCC  700

seq1  ATGAATTC  707
      ||||||||
seq2  ATGAATTC  708

seq1: chrX_139253645_139254296
seq2: B6Ng01-015J01.g_69_721

seq1  GAATTCTGGGAAGGGGTTGACTACAGTGCTGTTGCTATAGAAGTAGTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGAAGGGGTTGACTACAGTGCTGTTGCTATAGAAGTAGTGGT  50

seq1  AGAAGCTTTGTAATGGATGAGGTGTTCCAGGGAAGCTAGGTAGCCTGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTTTGTAATGGATGAGGTGTTCCAGGGAAGCTAGGTAGCCTGGGG  100

seq1  AGAGGTGGGAGGGGAACCAGGGCGTGGAACCCTTGGGATAAAGCAACCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTGGGAGGGGAACCAGGGCGTGGAACCCTTGGGATAAAGCAACCCT  150

seq1  GAGAAGGTGGACAAAGAAGAAAATGCTGTCGGGAGATTGTGGGAAGGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGTGGACAAAGAAGAAAATGCTGTCGGGAGATTGTGGGAAGGGTT  200

seq1  GGAGCAACAGGAGGACAGCTGAGTTGTCCTGAAGCAAAACCAGTAGAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAACAGGAGGACAGCTGAGTTGTCCTGAAGCAAAACCAGTAGAAAT  250

seq1  TTCACTTGGCTAGCAGTAGCTAAACCACATGTGATCTGAGAAGTGCTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTGGCTAGCAGTAGCTAAACCACATGTGATCTGAGAAGTGCTGCA  300

seq1  AGATCAGGTCTCTGGAGAAGAGTGCGGGGTGAGGGTCTGTGAGCATCGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGGTCTCTGGAGAAGAGTGCGGGGTGAGGGTCTGTGAGCATCGAA  350

seq1  AAACCAACGGAAGAGGTTTCCCTTCACAGCACTCCCGTTTTCCTCTCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAACGGAAGAGGTTTCCCTTCACAGCACTCCCGTTTTCCTCTCCTC  400

seq1  GGCTCTCCTTTTCCTCCCTTCCTCCCATTGTCTCCTCTCCCCGGGACTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTCCTTTTCCTCCCTTCCTCCCATTGTCTCCTCTCCCCGGGACTGG  450

seq1  CTCCATTCAAACCCCACAACAAGGGCAGTAGTGTGAGAGAGTGTTGATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTCAAACCCCACAACAAGGGCAGTAGTGTGAGAGAGTGTTGATGG  500

seq1  TATTGAGAAACAGGGGTCGGTGAAGTGCGAGG-TTTTGACACTGCTGAGA  549
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TATTGAGAAACAGGGGTCGGTGAAGTGCGAGGTTTTTGACACTGCTGAGA  550

seq1  TGGTGCACTGGAAATGACAGTGACAAGAGGACTAGGCATCGAAAATGGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCACTGGAAATGACAGTGACAAGAGGACTAGGCATCGAAAATGGAA  600

seq1  GAGGAGTCTAGGTTTTTTGAGCACCGCCCATAAAATTGTTTTGTGCGTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGTCTAGGTTTTTTGAGCACCGCCCATAAAATTGTTTTGTGCGTGT  650

seq1  GTT  652
      |||
seq2  GTT  653