This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
Click to search
Search Parameter
BAC name
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search by nearby gene name.
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Search Result
BAC
Clone Name
B6Ng01-017D10
Chromosome
4 (Build37)
X (Build37)
Map Location
65,173,345 - 65,173,809
133,057,246 - 133,057,860
singlet/doublet
singlet
singlet
Overlap gene
Astn2
Upstream gene
Pappa
Downstream gene
Trim32
Link
Open Mouse BAC browser
Click to get alignment info.
name
Pappa
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:18491
MGI:97479
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Astn2
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:56079
MGI:1889277
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs
name
Trim32
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:69807
MGI:1917057
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Pappa
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:59676576
GeneID:18491
MGI:97479
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: pregnancy-associated plasma protein A
transcript_id
: NM_021362.1
name
Astn2
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:118130659
GeneID:56079
MGI:1889277
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: astrotactin 2
transcript_id
: NM_019514.3
name
Astn2
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:118131023
GeneID:56079
MGI:1889277
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: astrotactin 2
transcript_id
: NM_207109.2
name
Trim32
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:27477052
GeneID:69807
MGI:1917057
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: tripartite motif protein 32
transcript_id
: NM_053084.1
name
Pappa
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:59676577
CCDS:CCDS18267.1
GeneID:18491
MGI:97479
definition
GO_function
: GO:0004175 - endopeptidase activity [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO_process
: GO:0006508 - proteolysis [Evidence IEA]
codon_start
: 1
product
: pregnancy-associated plasma protein A
protein_id
: NP_067337.1
name
Astn2
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:46488928
CCDS:CCDS18268.1
GeneID:56079
MGI:1889277
definition
GO_component
: GO:0005575 - cellular_component [Evidence ND]
GO_function
: GO:0003674 - molecular_function [Evidence ND]
GO_process
: GO:0008150 - biological_process [Evidence ND]
codon_start
: 1
note
: isoform a is encoded by transcript variant 1; bM423P8.1 (astrotactin 2); bM468K2.1 (astrotactin 2); bM243L4.1 (astrotactin 2); bM264P11.1 (astrotactin 2); bM383P24.1 (astrotactin 2); bM452J22.1 (novel protein)
product
: astrotactin 2 isoform a
protein_id
: NP_062387.2
name
Astn2
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:46488930
CCDS:CCDS18269.1
GeneID:56079
MGI:1889277
definition
GO_component
: GO:0005575 - cellular_component [Evidence ND]
GO_function
: GO:0003674 - molecular_function [Evidence ND]
GO_process
: GO:0008150 - biological_process [Evidence ND]
codon_start
: 1
note
: isoform b is encoded by transcript variant 2; bM423P8.1 (astrotactin 2); bM468K2.1 (astrotactin 2); bM243L4.1 (astrotactin 2); bM264P11.1 (astrotactin 2); bM383P24.1 (astrotactin 2); bM452J22.1 (novel protein)
product
: astrotactin 2 isoform b
protein_id
: NP_996992.1
name
Trim32
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:27477053
CCDS:CCDS18270.1
GeneID:69807
MGI:1917057
definition
GO_component
: GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]
GO_function
: GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA]
codon_start
: 1
exception
: mismatches in translation
note
: bM468K2.2 (tripartite motif protein 32); zinc finger protein 117
product
: tripartite motif protein 32
protein_id
: NP_444314.1
clone name
MSMg01-470G08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-495E08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-119I24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-071P14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-235K11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-387G04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-235J11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-045D19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-123F21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-490H18
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-381M23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-066N24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-381O24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-159G18
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-271J10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-362G18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-515H17
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-450J02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-101G19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-184I20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-346K02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-109L18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-236K14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-179K19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-065G17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-143A12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-065G16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-490L13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-112P03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-491L11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-499D21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-289M08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-140O20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-326I06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-326H07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-276D09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-085C09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-107P04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-349M12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-350E22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-320L04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-548P14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-409F11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-199C02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-305I09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-447N04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-514P17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-086B24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-194M10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-484G14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-517O06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-124F17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-456L18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-124G18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-455A21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-449O06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-449F08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-186K11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-326I05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-359E15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-290M08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-363K06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-379K22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-052E22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-134H06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-548A20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-444M17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-319E05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-307B04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-073O11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-446H21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-196G10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-151G04
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-050M09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-472N02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-334K16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-053C08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-098O23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-101G15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-122O06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-531H20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-439J17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-393N18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-194A23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-411P02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-426K12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-401J01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-064N08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-066J18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-055P02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-346F07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-366K10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-493C19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-189N06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-135N05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-435L13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-258F08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-188L24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-208G17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-091K14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-283D23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-015I08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-119F10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-061K22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-331L08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-097F15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-340H03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-106J10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-095H09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-256L03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-261F16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-268A17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-273M17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-251F19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-232N15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-232N19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-111F14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-294P11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-297M24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-173K04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-026B22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-144P17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-301F13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-231B22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-034E23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-177O24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-104H20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-010C06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-272D16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-114A19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-060M18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-167D24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-228F14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-241D16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-044E18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-087N11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-040G03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-072O12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-125K05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-169N23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-257J16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-258B14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-247A12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-296P20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-244M14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-244O05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-333G20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-191C11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-249A12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-347J17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-237N10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-291N13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-098O23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-039C14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-323O16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-024B17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-226B08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-114I11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-266E04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-276C13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-017D10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-168M07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-047I21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-157K24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-033D01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-294C17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-043L09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-051A23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-040N24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-306H20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-053F20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-016B13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-104J04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-346G20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-240C20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-098C07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-061H17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-066P10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-336K03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-153F11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-329N17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-143N07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-290D13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-137K18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-051D16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-041B22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-270C12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-021H08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-156D22
singlet/doublet
doublet
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unique
clone name
B6Ng01-219L17
singlet/doublet
singlet
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unique
clone name
B6Ng01-294F08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-094F03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-043P03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-013P15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-228L01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-047H18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-112B02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-086I13
singlet/doublet
doublet
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unique
clone name
B6Ng01-300N23
singlet/doublet
doublet
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unique
clone name
B6Ng01-271G06
singlet/doublet
doublet
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unique
clone name
B6Ng01-008H05
singlet/doublet
singlet
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clone name
B6Ng01-090J08
singlet/doublet
singlet
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unique
clone name
B6Ng01-093B08
singlet/doublet
doublet
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unique
clone name
B6Ng01-296I12
singlet/doublet
singlet
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unique
clone name
B6Ng01-131N14
singlet/doublet
doublet
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unique
clone name
B6Ng01-159G21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-259L04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-034D16
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doublet
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unique
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B6Ng01-250H07
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unique
clone name
B6Ng01-196G04
singlet/doublet
doublet
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clone name
B6Ng01-221O04
singlet/doublet
singlet
plural/unique
unique