BAC Information

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BAC

Clone NameB6Ng01-018C06
ChromosomeX (Build37)
Map Location 111,590,719 - 111,716,766
singlet/doubletdoublet
Overlap geneKlhl4, Gm1866
Upstream geneDach2, LOC237016, EG664945, EG634881, LOC100039201
Downstream geneEG546361, EG237009, 4930524E20Rik, LOC237008, EG664969, EG546362, LOC100039255, LOC623913, LOC546363
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018C06.bB6Ng01-018C06.g
ACCDH851625DH851626
length1,0751,098
definitionDH851625|Mus musculus domesticus DNA, BAC clone: B6Ng01-018C06, 5' end.DH851626|Mus musculus domesticus DNA, BAC clone: B6Ng01-018C06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,590,719 - 111,591,791)(111,715,667 - 111,716,766)
sequence
gaattcttctgtcattcaattttatgatagccatatgccaactgcatatt
tgcttttgtgtaactaccttatttaagaaaagattttctcttctttgttt
caagcctaaacttccaatgataaatattttagtatgatattatgataatg
ctaatatttagctatatgatagatataataaataatgcacaatatttacc
tattgccatagctgataactcctaaataaacaattgtattagtgtttaga
tagaaatggtggtgttaaaagaattcgcactataataaacatcagttctt
aaataaaatgaacgtgacatgtttatggtacctgcatacatcttaagcta
aagataaagccagttaaagagctatttagtttaaagacatcaaaaggaat
ggggatcatgctgctgtcctgtctattggacttgtaaggtgtggaataag
tgacagctacacagatgcattaatctgcattcctttctagtttgggaatg
tgaagtcatactcaaaattctgcttcactgatcacattttatttgtcaaa
taaaatttgctttgaaaactgtggctgtcgttgtaaatatcaatatagaa
caggaaaggagaactgtattaatgacagaatttgtcaatacgtaaatcca
cagatagtgagtatttaatgtgtttaggaactcggctagctgttaggaat
agaaggaaatctaaaggaataatgtatttccataatatatgcatattatg
aattcatatataaaatttaagtggctacaagtggttttaaagaaaattaa
aggggatagagtagaaagaaggtatccttcacatagtgaaagggtttcca
aagtaatacagttgagcagatattcaagtgcaatgaaaggatcaagcttc
tgagtcacaaatttgaagcaagtgcaggtcactgcccgtgtttcacagaa
aagtcctttaatggccatacatcatgtttctgtgcagatcagtgctacat
gtcagtgctacataagcttaataccaattgaatgaagtacaaaaatcttc
agattaaatgaaaaactaaattttc
gaattctattccctactttcttcagtatcagattccagatatcagatatt
atcctgaggttcttgatcaattagggattgtgttttctacagaatgaaag
ctaagtatctagttatattctgttatgtgttactgtccagtttgaccagt
ataatttgttgcagaaactcttttatacagtgtgtatttctggcttcttt
agcagcacaggcagggtgattctgacagttttactatatttttctttgat
taccagcaagaaagcctcttacaattacccatactgtttttttttttctg
atgtcacttcacattgatttcattttaaaagggtaagaaattgtgttcaa
tgtaagaaatgggcttttttcaacagacagtgttagaagaaataattatt
catgaaaagaagagatctgtgaatctaaacccctacacaaaactaatttg
tgatatacacttaacagtacatattaactccagacagtttctgcattaaa
acataagaaaatgcactcatgtgtagacagagactgaccatagaaagcaa
tacatatatgaaataaactcaattatattatttctgttttttaaaaaaag
ctatcacttatttgaaatgcttgtacatttaaatcagtaatttgcatgca
tgatatataaagaattcctattagttaatggtaatcaaaaaatacaatgg
tgatctaaatctctgcaaatatttcaaaaagtatatataaatttgtcatt
ataaagatgaaaatacaggcattattataaaatagttgaatagaaattaa
aataaatgggatatcatttacaattttccaaatatataaaatgtaaagcc
catcatatactaaatatttataaagatataaaataaatggcatcattatt
gtaagtgggggtttttaaaacaaaaactgaaagtccagcaactggaacaa
actacacctttcctattcacaatatgccgattagaaagaacagataatgg
attatagcagaaagaacatttgtgtaggtaagagtcctttagagaagcag
aacatatgaggaggatcttttattacttataaagtaaaggggatttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_111590719_111591791
seq2: B6Ng01-018C06.b_44_1113

seq1  GAATTCTTCTGTCATTCAATTTTATGATAGCCATATGCCAACTGCATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGTCATTCAATTTTATGATAGCCATATGCCAACTGCATATT  50

seq1  TGCTTTTGTGTAACTACCTTATTTAAGAAAAGATTTTCTCTTCTTTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTGTGTAACTACCTTATTTAAGAAAAGATTTTCTCTTCTTTGTTT  100

seq1  CAAGCCTAAACTTCCAATGATAAATATTTTAGTATGATATTATGATAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCTAAACTTCCAATGATAAATATTTTAGTATGATATTATGATAATG  150

seq1  CTAATATTTAGCTATATGATAGATATAATAAATAATGCACAATATTTACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATATTTAGCTATATGATAGATATAATAAATAATGCACAATATTTACC  200

seq1  TATTGCCATAGCTGATAACTCCTAAATAAACAATTGTATTAGTGTTTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCCATAGCTGATAACTCCTAAATAAACAATTGTATTAGTGTTTAGA  250

seq1  TAGAAATGGTGGTGTTAAAAGAATTCGCACTATAATAAACATCAGTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATGGTGGTGTTAAAAGAATTCGCACTATAATAAACATCAGTTCTT  300

seq1  AAATAAAATGAACGTGACATGTTTATGGTACCTGCATACATCTTAAGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAATGAACGTGACATGTTTATGGTACCTGCATACATCTTAAGCTA  350

seq1  AAGATAAAGCCAGTTAAAGAGCTATTTAGTTTAAAGACATCAAAAGGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAAAGCCAGTTAAAGAGCTATTTAGTTTAAAGACATCAAAAGGAAT  400

seq1  GGGGATCATGCTGCTGTCCTGTCTATTGGACTTGTAAGGTGTGGAATAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATCATGCTGCTGTCCTGTCTATTGGACTTGTAAGGTGTGGAATAAG  450

seq1  TGACAGCTACACAGATGCATTAATCTGCATTCCTTTCTAGTTTGGGAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGCTACACAGATGCATTAATCTGCATTCCTTTCTAGTTTGGGAATG  500

seq1  TGAAGTCATACTCAAAATTCTGCTTCACTGATCACATTTTATTTGTCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCATACTCAAAATTCTGCTTCACTGATCACATTTTATTTGTCAAA  550

seq1  TAAAATTTGCTTTGAAAACTGTGGCTGTCGTTGTAAATATCAATATAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTGCTTTGAAAACTGTGGCTGTCGTTGTAAATATCAATATAGAA  600

seq1  CAGGAAAGGAGAACTGTATTAATGACAGAATTTGTCAATACGTAAATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGGAGAACTGTATTAATGACAGAATTTGTCAATACGTAAATCCA  650

seq1  CAGATAGTGAGTATTTAATGTGTTTAGGAACTCGGCTAGCTGTTAGGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAGTGAGTATTTAATGTGTTTAGGAACTCGGCTAGCTGTTAGGAAT  700

seq1  AGAAGGAAATCTAAAGGAATAATGTATTTCCATAATATATGCATATTATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAAATCTAAAGGAATAATGTATTTCCATAATATATGCATATTATG  750

seq1  AATTCATATATAAAATTTAAGTGGCTACAAGTGGTTTTAAAGAAAATTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATATATAAAATTTAAGTGGCTACAAGTGGTTTTAAAGAAAATTAA  800

seq1  AGGGGATAGAGTAGAAAGAAGGTATCCTTCACATAGTGAAAGGGTTTCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGATAGAGTAGAAAGAAGGTATCCTTCACATAGTGAAAGGGTTTCCA  850

seq1  AAGTAATTACAGTTGAGCAGATATTCAAGTGCAATGAAAGGATCCAAGCT  900
      |||||| |||||||||||||||||||||||||||||||||||| ||||||
seq2  AAGTAA-TACAGTTGAGCAGATATTCAAGTGCAATGAAAGGAT-CAAGCT  898

seq1  TCTGAGTCACAAATTTGAAGCAAGTGCCAGGTCACTGCCCGTGTTTCACA  950
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCTGAGTCACAAATTTGAAGCAAGTG-CAGGTCACTGCCCGTGTTTCACA  947

seq1  GAAAAGTCC-TTAATGGCCATACATCATGTTTCTGTGCAGATCAGTGCTA  999
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTCCTTTAATGGCCATACATCATGTTTCTGTGCAGATCAGTGCTA  997

seq1  CATGTTCAGTGCTACATAAGCTCATAACCAATTGAATGAAGTACAAAAAT  1049
      |||| ||||||||||||||||| |  ||||||||||||||||||||||||
seq2  CATG-TCAGTGCTACATAAGCTTAATACCAATTGAATGAAGTACAAAAAT  1046

seq1  CCTCAGATTAAATGAAAAACTAAA  1073
      | ||||||||||||||||||||||
seq2  CTTCAGATTAAATGAAAAACTAAA  1070

seq1: chrX_111715667_111716766
seq2: B6Ng01-018C06.g_67_1164 (reverse)

seq1  ATAAATCCCCTTTATCTTTATATATGTATATAAAGATCCATCTCATATGG  50
      |||||||||||||| |||  |||| |||   ||||||||  |||||||| 
seq2  ATAAATCCCCTTTA-CTT--TATAAGTAATAAAAGATCCTCCTCATATGT  47

seq1  TCTGCTTCTCTAAAGGACTCTGACTAACAC-AATGTTCTTTCTGCTTATA  99
      ||||||||||||||||||||| ||  |||| |||||||||||||| ||||
seq2  TCTGCTTCTCTAAAGGACTCTTACCTACACAAATGTTCTTTCTGC-TATA  96

seq1  AT-CATTATCTG-TCTCTCTAATCGGCATATTGTGAATAGGAAAGGTGTA  147
      || ||||||||| ||| |||||||||||||||||||||||||||||||||
seq2  ATCCATTATCTGTTCTTTCTAATCGGCATATTGTGAATAGGAAAGGTGTA  146

seq1  GTTTGTTCCAGTTGCTGGACTTTCAGTTTTTGTTTTAAAAATCTCCACTT  197
      ||||||||||||||||||||||||||||||||||||||||| | ||||||
seq2  GTTTGTTCCAGTTGCTGGACTTTCAGTTTTTGTTTTAAAAACCCCCACTT  196

seq1  ACAATAATGATGCCATTTATTTTATATCTTTATAAATATTTAGTATATGA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAATGATGCCATTTATTTTATATCTTTATAAATATTTAGTATATGA  246

seq1  TGGGCTTTACATTTTATATATTTTGGAAAATTGTAAATGATATCCCATTT  297
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGGGCTTTACATTTTATATA-TTTGGAAAATTGTAAATGATATCCCATTT  295

seq1  ATTTTAATTTCTATTCAACTATTTTATAATAATGCCTGTATTTTCATCTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATTTCTATTCAACTATTTTATAATAATGCCTGTATTTTCATCTT  345

seq1  TATAATGACAAATTTATATATACTTTTTGAAATATTTGCAGAGATTTAGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATGACAAATTTATATATACTTTTTGAAATATTTGCAGAGATTTAGA  395

seq1  TCACCATTGTATTTTTTGATTACCATTAACTAATAGGAATTCTTTATATA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCATTGTATTTTTTGATTACCATTAACTAATAGGAATTCTTTATATA  445

seq1  TCATGCATGCAAATTACTGATTTAAATGTACAAGCATTTCAAATAAGTGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCATGCAAATTACTGATTTAAATGTACAAGCATTTCAAATAAGTGA  495

seq1  TAGCTTTTTTTAAAAAACAGAAATAATATAATTGAGTTTATTTCATATAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTTTTTTAAAAAACAGAAATAATATAATTGAGTTTATTTCATATAT  545

seq1  GTATTGCTTTCTATGGTCAGTCTCTGTCTACACATGAGTGCATTTTCTTA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGCTTTCTATGGTCAGTCTCTGTCTACACATGAGTGCATTTTCTTA  595

seq1  TGTTTTAATGCAGAAACTGTCTGGAGTTAATATGTACTGTTAAGTGTATA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAATGCAGAAACTGTCTGGAGTTAATATGTACTGTTAAGTGTATA  645

seq1  TCACAAATTAGTTTTGTGTAGGGGTTTAGATTCACAGATCTCTTCTTTTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAATTAGTTTTGTGTAGGGGTTTAGATTCACAGATCTCTTCTTTTC  695

seq1  ATGAATAATTATTTCTTCTAACACTGTCTGTTGAAAAAAGCCCATTTCTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATAATTATTTCTTCTAACACTGTCTGTTGAAAAAAGCCCATTTCTT  745

seq1  ACATTGAACACAATTTCTTACCCTTTTAAAATGAAATCAATGTGAAGTGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGAACACAATTTCTTACCCTTTTAAAATGAAATCAATGTGAAGTGA  795

seq1  CATCAGAAAAAAAAAAACAGTATGGGTAATTGTAAGAGGCTTTCTTGCTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGAAAAAAAAAAACAGTATGGGTAATTGTAAGAGGCTTTCTTGCTG  845

seq1  GTAATCAAAGAAAAATATAGTAAAACTGTCAGAATCACCCTGCCTGTGCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCAAAGAAAAATATAGTAAAACTGTCAGAATCACCCTGCCTGTGCT  895

seq1  GCTAAAGAAGCCAGAAATACACACTGTATAAAAGAGTTTCTGCAACAAAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAGAAGCCAGAAATACACACTGTATAAAAGAGTTTCTGCAACAAAT  945

seq1  TATACTGGTCAAACTGGACAGTAACACATAACAGAATATAACTAGATACT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTGGTCAAACTGGACAGTAACACATAACAGAATATAACTAGATACT  995

seq1  TAGCTTTCATTCTGTAGAAAACACAATCCCTAATTGATCAAGAACCTCAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTTCATTCTGTAGAAAACACAATCCCTAATTGATCAAGAACCTCAG  1045

seq1  GATAATATCTGATATCTGGAATCTGATACTGAAGAAAGTAGGGAATAGAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATATCTGATATCTGGAATCTGATACTGAAGAAAGTAGGGAATAGAA  1095

seq1  TTC  1100
      |||
seq2  TTC  1098