BAC Information

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BAC

Clone NameB6Ng01-019C02
ChromosomeX (Build37)
Map Location 84,320,797 - 84,321,452
singlet/doubletsinglet
Overlap geneIl1rapl1
Upstream geneNr0b1, CN716893, LOC667841, LOC236427, EG667852, EG436212, Gm41, EG629374, EG637027
Downstream geneLOC667876
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019C02.g
ACCDH852314
length656
definitionDH852314|Mus musculus domesticus DNA, BAC clone: B6Ng01-019C02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcttatggtcattaatagtattaatgaatctcaaaaacatagt
attttgcaaattaggccagaaaaaaatatgtttcctttatgctaatatta
aaaagagtaaaaataatcaatagtattagaaatcaagttagaaattgccc
ttccttggggagaaataattgaaaagagccattggaaacaagtctggatg
tcaatatattaattctgtattaatctgtttctgggttattagcttatgct
caattttaaaagttcattgatatataggcatagtctatttcagtaagaaa
ttataatctttgtaaagttttgaggttaaatagaataaactgaactcatg
tggtaatttttgttagtgttagattccttttgttgttgcaacaaatcagg
acaaattggatgccatgatacaactgcatataaatattttctctgacaga
tatgaaggtaagaaatctaaattcatgttttatgggtttcttttgttgca
caggctacaaatgtatctatttgatgcctctcctctcataatatcttctg
gtttctcccagttatcttgttgttcatggactaacagacatatcactcca
atctctgcttccttgttcacataatgtattcctttgtttcttctcttctg
tctttg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_84320797_84321452
seq2: B6Ng01-019C02.g_69_724 (reverse)

seq1  CAAAGACAGAAGAGAAGAAACAAAGGAATACATTATGTGAACAAGGAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACAGAAGAGAAGAAACAAAGGAATACATTATGTGAACAAGGAAGC  50

seq1  AGAGATTGGAGTGATATGTCTGTTAGTCCATGAACAACAAGATAACTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTGGAGTGATATGTCTGTTAGTCCATGAACAACAAGATAACTGGG  100

seq1  AGAAACCAGAAGATATTATGAGAGGAGAGGCATCAAATAGATACATTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCAGAAGATATTATGAGAGGAGAGGCATCAAATAGATACATTTGT  150

seq1  AGCCTGTGCAACAAAAGAAACCCATAAAACATGAATTTAGATTTCTTACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGTGCAACAAAAGAAACCCATAAAACATGAATTTAGATTTCTTACC  200

seq1  TTCATATCTGTCAGAGAAAATATTTATATGCAGTTGTATCATGGCATCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATCTGTCAGAGAAAATATTTATATGCAGTTGTATCATGGCATCCA  250

seq1  ATTTGTCCTGATTTGTTGCAACAACAAAAGGAATCTAACACTAACAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCCTGATTTGTTGCAACAACAAAAGGAATCTAACACTAACAAAAA  300

seq1  TTACCACATGAGTTCAGTTTATTCTATTTAACCTCAAAACTTTACAAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCACATGAGTTCAGTTTATTCTATTTAACCTCAAAACTTTACAAAGA  350

seq1  TTATAATTTCTTACTGAAATAGACTATGCCTATATATCAATGAACTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATTTCTTACTGAAATAGACTATGCCTATATATCAATGAACTTTTA  400

seq1  AAATTGAGCATAAGCTAATAACCCAGAAACAGATTAATACAGAATTAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGAGCATAAGCTAATAACCCAGAAACAGATTAATACAGAATTAATA  450

seq1  TATTGACATCCAGACTTGTTTCCAATGGCTCTTTTCAATTATTTCTCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACATCCAGACTTGTTTCCAATGGCTCTTTTCAATTATTTCTCCCC  500

seq1  AAGGAAGGGCAATTTCTAACTTGATTTCTAATACTATTGATTATTTTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGGCAATTTCTAACTTGATTTCTAATACTATTGATTATTTTTAC  550

seq1  TCTTTTTAATATTAGCATAAAGGAAACATATTTTTTTCTGGCCTAATTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTAATATTAGCATAAAGGAAACATATTTTTTTCTGGCCTAATTTG  600

seq1  CAAAATACTATGTTTTTGAGATTCATTAATACTATTAATGACCATAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATACTATGTTTTTGAGATTCATTAATACTATTAATGACCATAAGAA  650

seq1  GAATTC  656
      ||||||
seq2  GAATTC  656