BAC Information

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BAC

Clone NameB6Ng01-019C11
ChromosomeX (Build37)
Map Location 87,596,805 - 87,597,476
singlet/doubletsinglet
Overlap genenone
Upstream genePet2, EG629419, 4932429P05Rik, LOC633246, Nanog-ps1, 4930415L06Rik, EG547215, Gm370
Downstream geneLOC194615, LOC629471, LOC100041815, Gm44, LOC670074, LOC667972, LOC667976, Mageb2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019C11.bB6Ng01-019C11.g
ACCDH852329DH852330
length8921,083
definitionDH852329|Mus musculus domesticus DNA, BAC clone: B6Ng01-019C11, 5' end.DH852330|Mus musculus domesticus DNA, BAC clone: B6Ng01-019C11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
actggttagtcatggagcccctgtaaatttccatgggaacgcagaaagct
cttgggttgcctcaagggtcctcatgactaaagagtgggcccagagctag
ataatggggctcaggggatcatgtgtcactcacctatatagcctgtccca
ggcagaccaattgagatggcatgtgaatcttgatgaaggcaactcttata
aaggtaaacatttaattgggtctggcttacagtttcagagtttcactcca
gtatcaccatggcaggaagcatggcagcatgtaggcagacatagtactgc
aaaaggagctgaaaattatatatcttgatccaaaggcaagcatgagtctc
tgttctgcactgggcaaagcttgaccactatgagacctgagagcctgcct
acacagtggcacatgtgcagtgtccaacaatgcacctcctactcgaacaa
gaccacacttaattttttttctatttctttttttattagatattttcttc
atttacatttcaaatgctatcccctttcctagtttcctctccaaaagtcc
cttatacccttcccccacactgctctgcaacaaacccactcctacttcct
ggccctggcattcccctgtactggggcatataatctttgtaagactaagg
gtctctcctcccactgatggcagactagaccatcctctgctacatatgca
actagagacacaagctcgggggggggggtactttgttagttcatattgtt
gttcttcctatagggttgcagacccctttagcaccttgggtactttctct
agctccttcattgaggggccatgtgttctatccaatagatgactgtgagc
attcacttctgtattttgccaggcactggcatagcctcacaa
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgaaagc
aaatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactactggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggttggacctggagggcatcatcctgagtgaggtaacacattacaaag
aaactcacacaatatgtattcactgataagtggatattagccccaaacct
aggatacccaagatataagatataatttgctaaacacatgaaactcaaga
agaatgaagactgaagtgtggacactatgcccctccttagatttgggaac
aaaacacccatggaaggagttacagagacaaagtttggagctgagatgaa
acgatggaccatgtagagactgccatatccagggatccaccccataatca
gcatccaaacgctgacaccattgcatacactagcaagattttattgaaag
gacccagatgtaactgtctcttgtgagactattgccggggccttacaaac
acagaagtggttgctcacagtcactaatggatggatcatagggttcccaa
tgaggagctagagaaagtagcaaagaagctaagggatctgcaaccctata
ggtggaacacattatgaactaaccataccccgggagcttctgaactctac
tgcatagtgttcaaagatggctagtcgatacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_87596805_87597476
seq2: B6Ng01-019C11.b_51_722

seq1  ACTGGTTAGTCATGGAGCCCCTGTAAATTTCCATGGGAACGCAGAAAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTAGTCATGGAGCCCCTGTAAATTTCCATGGGAACGCAGAAAGCT  50

seq1  CTTGGGTTGCCTCAAGGGTCCTCATGACTAAAGAGTGGGCCCAGAGCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGTTGCCTCAAGGGTCCTCATGACTAAAGAGTGGGCCCAGAGCTAG  100

seq1  ATAATGGGGCTCAGGGGATCATGTGTCACTCACCTATATAGCCTGTCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGGGGCTCAGGGGATCATGTGTCACTCACCTATATAGCCTGTCCCA  150

seq1  GGCAGACCAATTGAGATGGCATGTGAATCTTGATGAAGGCAACTCTTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGACCAATTGAGATGGCATGTGAATCTTGATGAAGGCAACTCTTATA  200

seq1  AAGGTAAACATTTAATTGGGTCTGGCTTACAGTTTCAGAGTTTCACTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAAACATTTAATTGGGTCTGGCTTACAGTTTCAGAGTTTCACTCCA  250

seq1  GTATCACCATGGCAGGAAGCATGGCAGCATGTAGGCAGACATAGTACTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCACCATGGCAGGAAGCATGGCAGCATGTAGGCAGACATAGTACTGC  300

seq1  AAAAGGAGCTGAAAATTATATATCTTGATCCAAAGGCAAGCATGAGTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAGCTGAAAATTATATATCTTGATCCAAAGGCAAGCATGAGTCTC  350

seq1  TGTTCTGCACTGGGCAAAGCTTGACCACTATGAGACCTGAGAGCCTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGCACTGGGCAAAGCTTGACCACTATGAGACCTGAGAGCCTGCCT  400

seq1  ACACAGTGGCACATGTGCAGTGTCCAACAATGCACCTCCTACTCGAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTGGCACATGTGCAGTGTCCAACAATGCACCTCCTACTCGAACAA  450

seq1  GACCACACTTAATTTTTTTTCTATTTCTTTTTTTATTAGATATTTTCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACACTTAATTTTTTTTCTATTTCTTTTTTTATTAGATATTTTCTTC  500

seq1  ATTTACATTTCAAATGCTATCCCCTTTCCTAGTTTCCTCTCCAAAAGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACATTTCAAATGCTATCCCCTTTCCTAGTTTCCTCTCCAAAAGTCC  550

seq1  CTTATACCCTTCCCCCACACTGCTCTGCAACAAACCCACTCCTACTTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATACCCTTCCCCCACACTGCTCTGCAACAAACCCACTCCTACTTCCT  600

seq1  GGCCCTGGCATTCCCCTGTACTGGGGCATATAATCTTTGTAAGACTAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGGCATTCCCCTGTACTGGGGCATATAATCTTTGTAAGACTAAGG  650

seq1  GTCTCTCCTCCCACTGATGGCA  672
      ||||||||||||||||||||||
seq2  GTCTCTCCTCCCACTGATGGCA  672