BAC Information

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BAC

Clone NameB6Ng01-019O22
ChromosomeX (Build37)
Map Location 114,609,637 - 114,667,582
singlet/doubletdoublet
Overlap geneLOC624284
Upstream geneEG624153, LOC100039300, EG665045, LOC100039319
Downstream geneLOC665066, EG624388, ENSMUSG00000072994, LOC100039551, Tgifx1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019O22.bB6Ng01-019O22.g
ACCDH852876DH852877
length7201,161
definitionDH852876|Mus musculus domesticus DNA, BAC clone: B6Ng01-019O22, 5' end.DH852877|Mus musculus domesticus DNA, BAC clone: B6Ng01-019O22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,609,637 - 114,610,255)(114,666,411 - 114,667,582)
sequence
gaattccaagctcattgtctgcttcaaggattatctagcaaccattggta
cactggtaggggcttagctatgtcaaaaaatcaatccttaaaggtactta
taataaaacaatactgaaaaagagcacgtggatccttacatcagactaag
gaggggacagggtttgagtatacaggctatgggaatgctaatgttccagg
aggcacagtttccttgaaacactttgcctcgtgagtgcttccaggccttt
tggcctgttaagcagacttcattggagtgggcatagcactaggaaccctc
atagctcccagagactaagccaccaaccaaagagtatacatgagctgatt
agtggcatcccctacatatatcacagaagatctcatggaagagtgtattt
gacctcagtaggaaatgatgtacttaattctgtagaaacttgatgcccaa
gggaagagggatgctaaggggtaggtggggaggcaccctttcagaagcaa
aggggaagggggatggtgtgaagaactggtagagggaggactaggaaggg
gattaggtaatatttagaatgtaaataaaatagttaaaaaataagtccaa
aaccaaatttataataaataaataaataaaattaataaataataagaatc
aaatcataaaatgaaatttgagggtatatatatttttaaaagatcaatgt
tcaaaaattttatttgggtg
gaattcactgcataggctcatatatttggtctctaattaggaagcttatg
gaccatttaaatttctaataaactaatttaactacttaaatagacatttc
atgcaagcgacaatgtgcaatattgtaagatataagcatagttgtctcat
taccaatcaggaacttaacattacaaaactaaaaatactatccagctttg
taacgtcaacaaagttctaataatctaaatgattctgaaatttacctggt
aaattagaaggacaaatgaaagtaccctttaataattccatttcaaatgg
atcatctaagttctacttctataatgtggctagggtatactaaaaataat
cttttctttttcttttcttttcttttcttttcttttttcttttcttttct
tttaaagaatggcctaaaacaaacttgtttcttacttcaccaaactaaag
tttagaagaataaagggagccaaatctcctaagaagaatataattataat
atattatagtacacaagatattggggcaacaaaccagaaaatgatttaaa
tatgcaaagtttaatagtaacaaaagtgagaagagatataagtggtgtct
gtggtgaaattactcagacataagaagcacaacatatttgagtttaacat
tctactgtgaaaagaatgtcaaaatagttttatcacatggctccacattt
ttgtgaattttattggtatttttaactgatacataaaatcattaaagttg
taggtattaatagtgtagcgtgatgctctcctggatacattgaagggtgt
ttaaatcagttaaacatgtttatcttttccaatacttctttcttcctggg
aaaaatttcaaaaacattccctctagattagaaaagtaaaaagcagcatc
attgtttataacaacccactgtgcagtgtacccactgatgttctacttct
aaagttctgaaactgaattaccttgccaattctctcagtcttcctctact
cttcaatgtttattcattatttcactccaacttctgtaaagatcacttac
ttagaatggtttcactaaataagtggttcccaagttctatacaaataaca
tatgtttataattaatcgtttattctagacacattggtttctggtatttt
caccttacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_114609637_114610255
seq2: B6Ng01-019O22.b_144_767

seq1  CTTATAATAAAACAATACTGAAAAAGAGCACGTGGATCCTTACATCAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAATAAAACAATACTGAAAAAGAGCACGTGGATCCTTACATCAGAC  50

seq1  TAAGGAGGGGACAGGGTTTGAGTATACAGGCTATGGGAATGCTAATGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAGGGGACAGGGTTTGAGTATACAGGCTATGGGAATGCTAATGTTC  100

seq1  CAGGAGGCACAGTTTCCTTGAAACACTTTGCCTCGTGAGTGCTTCCAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGCACAGTTTCCTTGAAACACTTTGCCTCGTGAGTGCTTCCAGGC  150

seq1  CTTTTGGCCTGTTAAGCAGACTTCATTGGAGTGGGCATAGCACTAGGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGCCTGTTAAGCAGACTTCATTGGAGTGGGCATAGCACTAGGAAC  200

seq1  CCTCATAGCTCCCAGAGACTAAGCCACCAACCAAAGAGTATACATGAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATAGCTCCCAGAGACTAAGCCACCAACCAAAGAGTATACATGAGCT  250

seq1  GATTAGTGGCATCCCCTACATATATCACAGAAGATCTCATGGAAGAGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGTGGCATCCCCTACATATATCACAGAAGATCTCATGGAAGAGTGT  300

seq1  ATTTGACCTCAGTAGGAAATGATGTACTTAATTCTGTAGAAACTTGATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACCTCAGTAGGAAATGATGTACTTAATTCTGTAGAAACTTGATGC  350

seq1  CCAAGGGAAGAGGGATGCTAAGGGGTAGGTGGGGAGGCACCCTTTCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGGAAGAGGGATGCTAAGGGGTAGGTGGGGAGGCACCCTTTCAGAA  400

seq1  GCAAAGGGGAAGGGGGATGGTGTGAAGAACTGGTAGAGGGAGGACTAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGGGGAAGGGGGATGGTGTGAAGAACTGGTAGAGGGAGGACTAGGA  450

seq1  AGGGGATTAGGTAATATTTAGAATGTAAATAAAATAGTTAAAAAATAAG-  499
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGGGGATTAGGTAATATTTAGAATGTAAATAAAATAGTTAAAAAATAAGT  500

seq1  CCAAAACCAAATTTATAATAAATAAATAAAT-AAATAAATAAATAATAAG  548
      ||||||||||||||||||||||||||||||| |||| |||||||||||||
seq2  CCAAAACCAAATTTATAATAAATAAATAAATAAAATTAATAAATAATAAG  550

seq1  AATCAAATCAT-AAATGAAA-TTGAGGGTATAAATATTTTTAAAAGATCA  596
      ||||||||||| |||||||| ||||||||||| |||||||||||||||||
seq2  AATCAAATCATAAAATGAAATTTGAGGGTATATATATTTTTAAAAGATCA  600

seq1  ATGTTC-AAAAGTTTATTTGGGTG  619
      |||||| |||| ||||||||||||
seq2  ATGTTCAAAAATTTTATTTGGGTG  624

seq1: chrX_114666411_114667582
seq2: B6Ng01-019O22.g_67_1227 (reverse)

seq1  AAAGTAAAGGTGGAAAATACACAGAACACAATGTTGTCTAGATATAACGA  50
      ||||| ||||| |||||||| |||||  ||||| |||||||| ||||   
seq2  AAAGT-AAGGT-GAAAATAC-CAGAAACCAATG-TGTCTAGA-ATAAACG  45

seq1  ATTAATTAAATAAAACCATATG-TATTTGTATAGAACTTGGG-ACCACTT  98
      |||||||  |||||  |||||| ||||||||||||||||||| ||||| |
seq2  ATTAATT--ATAAA--CATATGTTATTTGTATAGAACTTGGGAACCAC-T  90

seq1  TATTTAGTGAACACA-TCTAAGTAAGTTGATC-TTACAGAAGTTGGAGTG  146
      |||||||||||  || |||||||||| ||||| |||||||||||||||||
seq2  TATTTAGTGAAACCATTCTAAGTAAG-TGATCTTTACAGAAGTTGGAGTG  139

seq1  AAATAATGAATAAACATTGAAGAGTAGAGGGAAGACTGAGAGGAATTGGC  196
      |||||||||||||||||||||||||||| |||||||||||| ||||||||
seq2  AAATAATGAATAAACATTGAAGAGTAGA-GGAAGACTGAGA-GAATTGGC  187

seq1  AAGGTAATTCAGTTTCAGAACTTTAGAAGTAGAACATCAGTGGGTACCAC  246
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAGGTAATTCAGTTTCAGAACTTTAGAAGTAGAACATCAGTGGGTA-CAC  236

seq1  TGCACAGTGGGTTGTTATAAACAATGATGCTGCTTTTTACTTTTCTAATC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGTGGGTTGTTATAAACAATGATGCTGCTTTTTACTTTTCTAATC  286

seq1  TAGAGGGAATGTTTTTGAAATTTTTCCCAGGAAGAAAGAAGTATTGGAAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGGAATGTTTTTGAAATTTTTCCCAGGAAGAAAGAAGTATTGGAAA  336

seq1  AGATAAACATGTTTAACCTGATTTAAACACCCTTCAATGTATCCAGGAGA  396
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGATAAACATGTTTAA-CTGATTTAAACACCCTTCAATGTATCCAGGAGA  385

seq1  GCATCACGCTACACTATTAATACCTACAACTTTAATGATTTTATGTATCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCACGCTACACTATTAATACCTACAACTTTAATGATTTTATGTATCA  435

seq1  GTTAAAAATACCAATAAAATTCACAAAAATGTGGAGCCATGTGATAAAAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAAATACCAATAAAATTCACAAAAATGTGGAGCCATGTGATAAAAC  485

seq1  TATTTTGACATTCTTTTCACAGTAGAATGTTAAACTCAAATATGTTGTGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGACATTCTTTTCACAGTAGAATGTTAAACTCAAATATGTTGTGC  535

seq1  TTCTTATGTCTGAGTAATTTCACCACAGACACCACTTATATCTCTTCTCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATGTCTGAGTAATTTCACCACAGACACCACTTATATCTCTTCTCA  585

seq1  CTTTTGTTACTATTAAACTTTGCATATTTAAATCATTTTCTGGTTTGTTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTTACTATTAAACTTTGCATATTTAAATCATTTTCTGGTTTGTTG  635

seq1  CCCCAATATCTTGTGTACTATAATATATTATAATTATATTCTTCTTAGGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAATATCTTGTGTACTATAATATATTATAATTATATTCTTCTTAGGA  685

seq1  GATTTGGCTCCCTTTATTCTTCTAAACTTTAGTTTGGTGAAGTAAGAAAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGGCTCCCTTTATTCTTCTAAACTTTAGTTTGGTGAAGTAAGAAAC  735

seq1  AAGTTTGTTTTAGGCCATTCTTTAAAAGAAAAGAAAAGAAAAAAGAAAAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGTTTTAGGCCATTCTTTAAAAGAAAAGAAAAGAAAAAAGAAAAG  785

seq1  AAAAGAAAAGAAAAGAAAAAGAAAAGATTATTTTTAGTATACCCTAGCCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAGAAAAGAAAAAGAAAAGATTATTTTTAGTATACCCTAGCCA  835

seq1  CATTATAGAAGTAGAACTTAGATGATCCATTTGAAATGGAATTATTAAAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATAGAAGTAGAACTTAGATGATCCATTTGAAATGGAATTATTAAAG  885

seq1  GGTACTTTCATTTGTCCTTCTAATTTACCAGGTAAATTTCAGAATCATTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTTTCATTTGTCCTTCTAATTTACCAGGTAAATTTCAGAATCATTT  935

seq1  AGATTATTAGAACTTTGTTGACGTTACAAAGCTGGATAGTATTTTTAGTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTATTAGAACTTTGTTGACGTTACAAAGCTGGATAGTATTTTTAGTT  985

seq1  TTGTAATGTTAAGTTCCTGATTGGTAATGAGACAACTATGCTTATATCTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATGTTAAGTTCCTGATTGGTAATGAGACAACTATGCTTATATCTT  1035

seq1  ACAATATTGCACATTGTCGCTTGCATGAAATGTCTATTTAAGTAGTTAAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATTGCACATTGTCGCTTGCATGAAATGTCTATTTAAGTAGTTAAA  1085

seq1  TTAGTTTATTAGAAATTTAAATGGTCCATAAGCTTCCTAATTAGAGACCA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTATTAGAAATTTAAATGGTCCATAAGCTTCCTAATTAGAGACCA  1135

seq1  AATATATGAGCCTATGCAGTGAATTC  1172
      ||||||||||||||||||||||||||
seq2  AATATATGAGCCTATGCAGTGAATTC  1161