BAC Information

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BAC

Clone NameB6Ng01-022G24
ChromosomeX (Build37)
Map Location 45,738,062 - 45,853,393
singlet/doubletdoublet
Overlap geneBcorl1, Elf4, Aifm1
Upstream geneEG434775, LOC236775, LOC100040133, LOC100040145, EG624187, Smarca1, LOC676253, Ocrl, LOC270596, LOC665672, Apln, Xpnpep2, 1200013B08Rik, Zdhhc9, Utp14a, LOC637576
Downstream geneRab33a, Suhw3, Slc25a14, Gpr119, Rbmx2, LOC665752, Gm595, EG637758, LOC100040295, Enox2, 1100001E04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022G24.bB6Ng01-022G24.g
ACCDH854653DH854654
length1,055914
definitionDH854653|Mus musculus domesticus DNA, BAC clone: B6Ng01-022G24, 5' end.DH854654|Mus musculus domesticus DNA, BAC clone: B6Ng01-022G24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,738,062 - 45,739,142)(45,852,473 - 45,853,393)
sequence
gaattcccaaatgataccagtgagggatagatgcttgtctttgcccacct
cttcctcccccgtgaatccttgttgcagcttagacaagacactcaagtct
atttgctcatctttaaatggagctgatgctccctgccccttctgtctcac
aggagtacttggggggaacaaaagcaatgtctgtgacaggctttgataac
ggaaagtgttctctgagggtcagtatgcatccttgcacttcaggcagaga
caggaatgagagaactagagggaaagccagaccaactgtgatctggcatg
ccagggaatccattatcccaaacccatagactacaggactgataggagcc
actgggagagtacagacacgtgcttggctctggccgcctctttcttcttg
tcactttttatttatttaatgtatgtgcttatattgtgtgtagaggtgag
aggacaagctcgggtgtaggtcccttgtttgagacagtctctctgttttt
ctgctgcatgcactgggtaagcaggaatggatttttttctgtctccacct
cccatcttcccatagagtactgggtttataggcacttgtatcacaagtcc
agcttttatatgggttctggggattcgaactcatatcctcatgcttgtat
ggcaaagttgcttttactccagctctcctgttggtgctcttaattcccaa
gtacttcttagaggtaggcacttatattccagtcattttacagtaaagac
ttatgagaggtgactcagtggtcctccttgccagaatcagacatgaaaca
aatttgtctgcctgaggagaggcctaggttgtcatgtgtcttgcagtctc
tgagaactgctttctgccgtttctgggcctcctaggaagtagttagtagc
agaaaacactaccttcttaaacagttctgagacagtagtaggtcccgggt
ctgcctctttcccacttccctggcccatccacaaagggctcagcagaccc
tcatgtttcgtgtcttgtcttgttggaccgggtctgtaaaatctcctgga
gaggg
gaattcagtatccagagagtttcttacggaaagtctcagaaaacctgatg
tattttcatctactttcaagtactctttccttatgtgtacaacaaatcat
tttatttcttgacaaaggggttttgggctggggtttaagttcagtggtag
agttcttgattagtatgcatgaagctcagggttccatccctagcactgaa
aaagtaaacttggccatagtgctttttgcataaaggaagtaccttcaatg
tagacgaaagcttctcatttaattgaaatgatattagcttatggtaagag
ctaggtatgtcaggaaataaactttctctgtgtttgggtctacaggccta
caaaactataaaagaagaccaaaaaagatacaatgaaagagtgatgggat
taggactgtccccagaagagaaacagagaagagccattgcctccggtaag
gactcccctgtctcttctgtgtgggttgagatgaaataagggaaagtgat
taaggctgaggtgctatgacttgttaatatcttgttgacgtgagtgaaga
gtgtgagagtgtgtttctagaaactatggttttaccgcacaacagggagc
aattcctaaagtatttgcttggcattttagaccagagaggaaaattaatt
attgtgggtacctgtccattttttccatgttggatttctctttttttaat
ttgttttatttgtttgtttgtttgtttgtttataaatgttacttacccac
cttcttggttcccccctccaagagttctttaccccatcccctctcccttt
gcctctgagagatgcttttccccaacctcaccctcacatctccttccctg
gggcatcatcaatctacaggattagacactcctctccactgaggccagac
aagcagtcctctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_45738062_45739142
seq2: B6Ng01-022G24.b_47_1101

seq1  GAATTCCCAAATGATACCAGTGAGGGATAGATGCTTGTCTTTGCCCACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAATGATACCAGTGAGGGATAGATGCTTGTCTTTGCCCACCT  50

seq1  CTTCCTCCCCCGTGAATCCTTGTTGCAGCTTAGACAAGACACTCAAGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCCCCCGTGAATCCTTGTTGCAGCTTAGACAAGACACTCAAGTCT  100

seq1  ATTTGCTCATCTTTAAATGGAGCTGATGCTCCCTGCCCCTTCTGTCTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTCATCTTTAAATGGAGCTGATGCTCCCTGCCCCTTCTGTCTCAC  150

seq1  AGGAGTACTTGGGGGGAACAAAAGCAATGTCTGTGACAGGCTTTGATAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTACTTGGGGGGAACAAAAGCAATGTCTGTGACAGGCTTTGATAAC  200

seq1  GGAAAGTGTTCTCTGAGGGTCAGTATGCATCCTTGCACTTCAGGCAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGTGTTCTCTGAGGGTCAGTATGCATCCTTGCACTTCAGGCAGAGA  250

seq1  CAGGAATGAGAGAACTAGAGGGAAAGCCAGACCAACTGTGATCTGGCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATGAGAGAACTAGAGGGAAAGCCAGACCAACTGTGATCTGGCATG  300

seq1  CCAGGGAATCCATTATCCCAAACCCATAGACTACAGGACTGATAGGAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGAATCCATTATCCCAAACCCATAGACTACAGGACTGATAGGAGCC  350

seq1  ACTGGGAGAGTACAGACACGTGCTTGGCTCTGGCCGCCTCTTTCTTCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGAGAGTACAGACACGTGCTTGGCTCTGGCCGCCTCTTTCTTCTTG  400

seq1  TCACTTTTTATTTATTTAATGTATGTGCTTATATTGTGTGTAGAGGTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTTTATTTATTTAATGTATGTGCTTATATTGTGTGTAGAGGTGAG  450

seq1  AGGACAAGCTCGGGTGTAGGTCCCTTGTTTGAGACAGTCTCTCTGTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAAGCTCGGGTGTAGGTCCCTTGTTTGAGACAGTCTCTCTGTTTTT  500

seq1  CTGCTGCATGCACTGGGTAAGCAGGAATGGATTTTTTTCTGTCTCCACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCATGCACTGGGTAAGCAGGAATGGATTTTTTTCTGTCTCCACCT  550

seq1  CCCATCTTCCCATAGAGTACTGGGTTTATAGGCACTTGTATCACAAGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCTTCCCATAGAGTACTGGGTTTATAGGCACTTGTATCACAAGTCC  600

seq1  AGCTTTTATATGGGTTCTGGGGATTCGAACTCATATCCTCATGCTTGTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTATATGGGTTCTGGGGATTCGAACTCATATCCTCATGCTTGTAT  650

seq1  GGCAAAGTTGCTTTTACTCCAGCTCTCCTGTTGGTGCTCTTAATTCCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGTTGCTTTTACTCCAGCTCTCCTGTTGGTGCTCTTAATTCCCAA  700

seq1  GTACTTCTTAGAGGTAGGCACTTATATTCCAGTCATTTTACAGTAAAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTCTTAGAGGTAGGCACTTATATTCCAGTCATTTTACAGTAAAGAC  750

seq1  TTATGAGAGGTGACTCAGTGGTCCTCCTTGCCAGAATCAGGACATGAAAC  800
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTATGAGAGGTGACTCAGTGGTCCTCCTTGCCAGAATCA-GACATGAAAC  799

seq1  AAATTTGTCTGCCTGAGGAAGAGGCCTAGGTTGTCAATGTGTCTTGCAGT  850
      |||||||||||||||||| |||||||||||||||| ||||||||||||||
seq2  AAATTTGTCTGCCTGAGG-AGAGGCCTAGGTTGTC-ATGTGTCTTGCAGT  847

seq1  CTCTGAGTAACTGCTTTCTGCCCGTTTCTGGGCCTCCCTAGGAAGTAGGT  900
      ||||||| |||||||||||| |||||||||||||| ||||||||||| ||
seq2  CTCTGAG-AACTGCTTTCTG-CCGTTTCTGGGCCT-CCTAGGAAGTA-GT  893

seq1  TAGTAGGCAGAAAACACTACCATCTTTAAACAGTTCTGAGACAGGTAG-A  949
      ||||| ||||||||||||||| || |||||||||||||||||| |||| |
seq2  TAGTA-GCAGAAAACACTACCTTC-TTAAACAGTTCTGAGACA-GTAGTA  940

seq1  GGTCCCCGGGTCCTGCCCTCCTTCCCATCTTCCCTGGCCCCATCCCACAC  999
      ||| ||||||| ||| |||| |||||| ||||||||| ||||||   |||
seq2  GGT-CCCGGGT-CTG-CCTCTTTCCCA-CTTCCCTGG-CCCATC---CAC  982

seq1  AAAGGGCTCAGCAGCACACTCATGCTTCTGTGTGCTTGCTCTGGCTGGCA  1049
      |||||||||||||| || |||||| ||| |||| |||| ||| | ||| |
seq2  AAAGGGCTCAGCAG-ACCCTCATGTTTC-GTGT-CTTG-TCTTGTTGG-A  1027

seq1  CCGGGTCTGCTAAAATGTTCTCCTGGAGAGGG  1081
      ||||||||| |||||   ||||||||||||||
seq2  CCGGGTCTG-TAAAA---TCTCCTGGAGAGGG  1055

seq1: chrX_45852473_45853393
seq2: B6Ng01-022G24.g_69_982 (reverse)

seq1  GCAGAGGACTGCCTTGTCTGGCCTCAGTGGGAGAGGATGTGTCTAATCCT  50
      ||||||||||| |||||||||||||||| |||||||| ||||||||||||
seq2  GCAGAGGACTG-CTTGTCTGGCCTCAGT-GGAGAGGA-GTGTCTAATCCT  47

seq1  GTAGATTGATGATGCCCCAGGGAAGGAGAATGTGAGGGGTGAGGTTGGGG  100
      |||||||||||||||||||||||||||| |||||| |||||||||| |||
seq2  GTAGATTGATGATGCCCCAGGGAAGGAG-ATGTGA-GGGTGAGGTT-GGG  94

seq1  GAAAAGCATCCTCTCAGAGGCAAAGGGGAGAGGGGATGGGGTAAAGAACT  150
      ||||||||| |||||||||||||| |||||||||||||||||||||||||
seq2  GAAAAGCAT-CTCTCAGAGGCAAA-GGGAGAGGGGATGGGGTAAAGAACT  142

seq1  CTTGGAGGGGGGAACCAAGAAGGTGGGTAAGTAACATTTATAAACAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGGGGGGAACCAAGAAGGTGGGTAAGTAACATTTATAAACAAACA  192

seq1  AACAAACAAACAAATAAAAC-AATTAAAAAAAGAGAAATCCAACATGGAA  249
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AACAAACAAACAAATAAAACAAATTAAAAAAAGAGAAATCCAACATGGAA  242

seq1  AAAATGGACAGGTACCCACAATAATTAATTTTCCTCTCTGGTCTAAAATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGACAGGTACCCACAATAATTAATTTTCCTCTCTGGTCTAAAATG  292

seq1  CCAAGCAAATACTTTAGGAATTGCTCCCTGTTGTGCGGTAAAACCATAGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCAAATACTTTAGGAATTGCTCCCTGTTGTGCGGTAAAACCATAGT  342

seq1  TTCTAGAAACACACTCTCACACTCTTCACTCACGTCAACAAGATATTAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAAACACACTCTCACACTCTTCACTCACGTCAACAAGATATTAAC  392

seq1  AAGTCATAGCACCTCAGCCTTAATCACTTTCCCTTATTTCATCTCAACCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATAGCACCTCAGCCTTAATCACTTTCCCTTATTTCATCTCAACCC  442

seq1  ACACAGAAGAGACAGGGGAGTCCTTACCGGAGGCAATGGCTCTTCTCTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAAGAGACAGGGGAGTCCTTACCGGAGGCAATGGCTCTTCTCTGT  492

seq1  TTCTCTTCTGGGGACAGTCCTAATCCCATCACTCTTTCATTGTATCTTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCTGGGGACAGTCCTAATCCCATCACTCTTTCATTGTATCTTTT  542

seq1  TTGGTCTTCTTTTATAGTTTTGTAGGCCTGTAGACCCAAACACAGAGAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTTCTTTTATAGTTTTGTAGGCCTGTAGACCCAAACACAGAGAAA  592

seq1  GTTTATTTCCTGACATACCTAGCTCTTACCATAAGCTAATATCATTTCAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTTCCTGACATACCTAGCTCTTACCATAAGCTAATATCATTTCAA  642

seq1  TTAAATGAGAAGCTTTCGTCTACATTGAAGGTACTTCCTTTATGCAAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGAGAAGCTTTCGTCTACATTGAAGGTACTTCCTTTATGCAAAAA  692

seq1  GCACTATGGCCAAGTTTACTTTTTCAGTGCTAGGGATGGAACCCTGAGCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTATGGCCAAGTTTACTTTTTCAGTGCTAGGGATGGAACCCTGAGCT  742

seq1  TCATGCATACTAATCAAGAACTCTACCACTGAACTTAAACCCCAGCCCAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCATACTAATCAAGAACTCTACCACTGAACTTAAACCCCAGCCCAA  792

seq1  AACCCCTTTGTCAAGAAATAAAATGATTTGTTGTACACATAAGGAAAGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCTTTGTCAAGAAATAAAATGATTTGTTGTACACATAAGGAAAGAG  842

seq1  TACTTGAAAGTAGATGAAAATACATCAGGTTTTCTGAGACTTTCCGTAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGAAAGTAGATGAAAATACATCAGGTTTTCTGAGACTTTCCGTAAG  892

seq1  AAACTCTCTGGATACTGAATTC  921
      ||||||||||||||||||||||
seq2  AAACTCTCTGGATACTGAATTC  914