BAC Information

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BAC

Clone NameB6Ng01-022N09
ChromosomeX (Build37)
Map Location 121,586,551 - 121,587,220
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665281, EG625591, LOC665325, EG382265, LOC665364, EG546368, LOC100038940, LOC100038941, EG625699, LOC100038942, LOC100039828, EG434843
Downstream geneEG665463, EG665522, LOC100038969, LOC100038978, EG665579, EG665611
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022N09.bB6Ng01-022N09.g
ACCDH854930DH854931
length1,2211,069
definitionDH854930|Mus musculus domesticus DNA, BAC clone: B6Ng01-022N09, 5' end.DH854931|Mus musculus domesticus DNA, BAC clone: B6Ng01-022N09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacttaggttcagcagtgagattatcagaatctaggaacatagca
ggcagttagccgcagcttccagaagctgcttcttaggtgagagagaaaaa
agggtttagattttataattaggtggattggccgcagtcagaaactgcat
caggtgggaggaaaatgtcccagaaacagagagaaattttaggggtgccc
tgccttgttctctctgggacctacagcagaagttctctgccctctttgaa
tttttttctaaggtcttgactaatgtctggtgcaccaatctgtccacatg
ttcgattcatgtatgttcatgtctagtctgaatgaatgaatgttctgtgt
tttcatgttggaagataaaagatgactaaaactttctcagctggtatagc
aaagcctagagtggccacaggctttagccaagatcaggcacacatcagga
gggcccctgctgtaaaaactcttctttaaaagaaaaaagagtcttcaacc
ttgtggtattggggcgaaaatgctgatagatgtttttttccctaagaaaa
ttctctgcattcgtaattattgtgtttatctgattacaaagtgtctttta
ttttataattatagctagaaaaaattaatattctctgattggtctaagtg
taactgcttcaattttttttttctgatgatgtgctctgcatgtcttcaca
atcagctcataagttattgttaatgattaaataattgttacattgataac
agagggttagccttaaattggcaactctagagtttttcaaacacgtgaca
taagcaggtcaaaaaactgggcctcctaagaaacttctgagataatattt
aatgtgattcttatcctagaaagtagaagtaagataagatttaaagcaat
gactctttaatgaagcattaaagattgcactgtcatgtatcatagggata
aactggcagccaaacttcgtaatatgatagtatgctttctattattgatt
ctaaagataataaattgtttgaatttgggttttgctttcccaagttataa
gtttaatctatggtgcaaaggaaacttagtattcttaaatccttccctca
tgtagaggaacttaaagctcaagacgctctgatggttaggtgaactcttt
gcttgcaattggtcccgtgggaactagagactgcctctggaaatctctgg
aatctcttttaaaggacctcg
gaattccaggagatctttaaattctttctttatttcttccctgaccaagt
tttaatagagtagagaattgttcaatttccatgtatgtgtgggctttctc
tcttgttgttattgaagagcagccttagtccatgatgatctgataggatg
cataggattattatcaacttttggaattggttgaggcttgtttttagccc
tagagtatgatcaattttgcagaaggtaccatgaggtgcagagaagtgca
ttcttttgttgtagggtgaaatgttctgtagacatctgttaaatccattt
ctttcataacctcttttagtttcactgtgtctttgtttagattctgattc
aatgacctgtccattagtgacagtggggtgttgaagtctcccactgttgg
ggcgggcttgtggctctcatgtctgggttcgagcctgagatgcattttga
aactgaaagaaaagagggaatctaggcgggtaaacaatgaaatggagtca
agactgaattctgatcaagactcaactttaatgtaggcaaacattcttta
taaagaagaggggaggcccattcccagacacacaaagttcctttgaagtt
gtcagatcagccttttagtaggatcccaggaaaatcacagttccttgtta
actctggaagatcttggagaaatgattcagcctcaggcaggtggcaggta
gtagcatatcaaaggagagggatgagaagccacacagcaggtggctctgc
ctcagggtcagatggtcacagccagccttgctaggctggaaggaggtata
ttcccccccccttttaataatattaaataaaactggactgaggcataaaa
tttattttatgctctaagtcctgccttggatttatggtggctgcagctct
tgcctgtcttgggatctcagatcctcccggaccatccaatttcatcatag
tggactacatgcagcaagggatgttaatatttacacaaacatgccactgt
gtgtttatcaaccaccacggaattttgggatggacccctgtctatacagg
gtatgactcgtgaactggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_121586551_121587220
seq2: B6Ng01-022N09.g_471_1136

seq1  GGGCTTGTGGCTCTCATGTCTGGGTTCGAGCCTGAGATGCATTTTGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTGTGGCTCTCATGTCTGGGTTCGAGCCTGAGATGCATTTTGAAAC  50

seq1  TGAAAGAAAAGAGGGAATCTAGGCGGGTAAACAATGAAATGGAGTCAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAAAAGAGGGAATCTAGGCGGGTAAACAATGAAATGGAGTCAAGA  100

seq1  CTGAATTCTGATCAAGACTCAACTTTAATGTAGGCAAACATTCTTTATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTCTGATCAAGACTCAACTTTAATGTAGGCAAACATTCTTTATAA  150

seq1  AGAAGAGGGGAGGCCCATTCCCAGACACACAAAGTTCCTTTGAAGTTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGGGAGGCCCATTCCCAGACACACAAAGTTCCTTTGAAGTTGTC  200

seq1  AGATCAGCCTTTTAGTAGGATCCCAGGAAAATCACAGTTCCTTGTTAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGCCTTTTAGTAGGATCCCAGGAAAATCACAGTTCCTTGTTAACT  250

seq1  CTGGAAGATCTTGGAGAAATGATTCAGCCTCAGGCAGGTGGCAGGTAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGATCTTGGAGAAATGATTCAGCCTCAGGCAGGTGGCAGGTAGTA  300

seq1  GCATATCAAAGGAGAGGGATGAGAAGCCACACAGCAGGTGGCTCTGCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATCAAAGGAGAGGGATGAGAAGCCACACAGCAGGTGGCTCTGCCTC  350

seq1  AGGGGCAGATGGTCACAGCCAGCCTTGCTAGGCTGGAAGGAGGTAATATC  400
      |||| ||||||||||||||||||||||||||||||||||||||||   ||
seq2  AGGGTCAGATGGTCACAGCCAGCCTTGCTAGGCTGGAAGGAGGTATATTC  400

seq1  CCCCCCCCTTTAAATAATATTAAATAAAACTGGACTGAGGCATAAAATTT  450
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCTTTTAATAATATTAAATAAAACTGGACTGAGGCATAAAATTT  450

seq1  A-TTTATGCTCTAAAGTCCTGCCTTGGAATTATGGTGGCTGGCAGCTC-T  498
      | |||||||||| ||||||||||||||| ||||||||||| ||||||| |
seq2  ATTTTATGCTCT-AAGTCCTGCCTTGGATTTATGGTGGCT-GCAGCTCTT  498

seq1  GCCTGTCTTGGGATCTCAGATCCTCCCGAACCATCCAATTTCATCATAGT  548
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GCCTGTCTTGGGATCTCAGATCCTCCCGGACCATCCAATTTCATCATAGT  548

seq1  GGACTACATGCAGCTA-GGATGTGTAATAATTTACACAAACATGGCACTG  597
      |||||||||||||| | |||||| |||| ||||||||||||||| |||||
seq2  GGACTACATGCAGCAAGGGATGT-TAAT-ATTTACACAAACATGCCACTG  596

seq1  TGGTGTTTTATCAACAACCACGGACTTTTGGCATGTACCCCTGTCTTAGA  647
      | ||| ||||||||| |||||||| |||||| ||| ||||||||| || |
seq2  T-GTG-TTTATCAACCACCACGGAATTTTGGGATGGACCCCTGTC-TATA  643

seq1  C-TGGTATGACTCCGTGATCTGGT  670
      |  ||||||||| ||||| |||||
seq2  CAGGGTATGACT-CGTGAACTGGT  666