MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-023G23
Chromosome	X (Build37)
Map Location	161,891,149 - 161,892,168
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Asb11, Asb9, Mospd2, Fancb, LOC627045, Glra2
Downstream gene	LOC100040753, Gemin8, Gpm6b, Ofd1, Trappc2
Link	Open Mouse BAC browser

Click to get alignment info.

name	Asb11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68854 MGI:1916104
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Asb9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69299 MGI:1916549
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mospd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76763 MGI:1924013
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fancb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237211 MGI:2448558
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC627045 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627045
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Glra2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237213 MGI:95748
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040753 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040753
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Gemin8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237221 MGI:2384300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpm6b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14758 MGI:107672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ofd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237222 MGI:1350328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trappc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66226 MGI:1913476
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Asb11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:17105325 GeneID:68854 MGI:1916104
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and SOCS box-containing protein 11 transcript_id : NM_026853.1

name	Asb9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373912 GeneID:69299 MGI:1916549
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and SOCS box-containing protein 9 transcript_id : NM_027027.2

name	Mospd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142356338 GeneID:76763 MGI:1924013
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : motile sperm domain containing 2 transcript_id : NM_029730.2

name	Fancb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54020736 GeneID:237211 MGI:2448558
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Fanconi anemia, complementation group B transcript_id : NM_175027.3

name	Glra2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373644 GeneID:237213 MGI:95748
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycine receptor, alpha 2 subunit transcript_id : NM_183427.3

name	LOC100040753 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272509 GeneID:100040753
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : similar to pol protein transcript_id : XM_001475185.1

name	Gemin8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125628630 GeneID:237221 MGI:2384300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gem (nuclear organelle) associated protein 8 transcript_id : NM_146238.3

name	Gpm6b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130376 GeneID:14758 MGI:107672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycoprotein m6b transcript_id : NM_023122.2

name	Ofd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342288 GeneID:237222 MGI:1350328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oral-facial-digital syndrome 1 gene homolog (human) transcript_id : NM_177429.2

name	Trappc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388246 GeneID:66226 MGI:1913476
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : trafficking protein particle complex 2 transcript_id : NM_025432.2

name	Asb11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17105326 CCDS:CCDS30523.1 GeneID:68854 MGI:1916104
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] codon_start : 1 product : ankyrin repeat and SOCS box-containing protein 11 protein_id : NP_081129.1

name	Asb9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311897 CCDS:CCDS30524.1 GeneID:69299 MGI:1916549
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : ankyrin repeat and SOCS box-containing protein 9 protein_id : NP_081303.1

name	Mospd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110626072 GeneID:76763 MGI:1924013
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : motile sperm domain containing 2 protein_id : NP_084006.1

name	Fancb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54020737 GeneID:237211 MGI:2448558
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 product : Fanconi anemia, complementation group B protein_id : NP_778192.2

name	Glra2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34556195 GeneID:237213 MGI:95748
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005254 - chloride channel activity [Evidence IEA]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO:0004890 - GABA-A receptor activity [Evidence IEA]; GO:0016934 - glycine-gated chloride channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0030594 - neurotransmitter receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006821 - chloride transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0007268 - synaptic transmission [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : glycine receptor, alpha 2 subunit protein_id : NP_906272.1

name	LOC100040753 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272510 GeneID:100040753
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001475235.1

name	Gemin8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559907 GeneID:237221 MGI:2384300
definition	codon_start : 1 product : gem (nuclear organelle) associated protein 8 protein_id : NP_666350.2

name	Gpm6b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963495 CCDS:CCDS30526.1 GeneID:14758 MGI:107672
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : glycoprotein m6b protein_id : NP_075611.1

name	Ofd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28933461 GeneID:237222 MGI:1350328
definition	GO_component : GO:0005932 - basal body [Evidence ISS]; GO:0005813 - centrosome [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0035083 - cilium axoneme biogenesis [Evidence IMP] codon_start : 1 product : oral-facial-digital syndrome 1 gene homolog protein_id : NP_803178.1

name	Trappc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384832 GeneID:66226 MGI:1913476
definition	codon_start : 1 exception : mismatches in translation note : spondyloepiphyseal dysplasia, late; spondyloepiphyseal dysplasia tarda protein product : trafficking protein particle complex 2 protein_id : NP_079708.1

name	LOC627045 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627045
definition	number : 1 pseudo : _no_value

name	LOC627045 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627045
definition	number : 2 pseudo : _no_value

name	LOC627045 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627045
definition	number : 3 pseudo : _no_value

name	LOC627045 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627045
definition	number : 4 pseudo : _no_value

clone name	MSMg01-419A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200I23
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-023G23.b	B6Ng01-023G23.g
ACC	DH855356	DH855357
length	1,019	1,017
definition	DH855356\|Mus musculus domesticus DNA, BAC clone: B6Ng01-023G23, 5' end.	DH855357\|Mus musculus domesticus DNA, BAC clone: B6Ng01-023G23, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcagctctgcttggacagttaagcatatagcacaacaacagctcat aaaatcccatatccctcagggttcctagatatcactggaagtaaacaaaa tacagagtaagctcttaagacgcgttgcttgtaagcgaaggcagagggag agagagaagaaaagggagagggaggagacagcagagacaagagagacaga gacagggagaataaaccaaacaaaggaaatttggcaatgcatattgtgag aatttttcatttgtatatattttaatctaataatatatttctgggagttt atcctaagggataagtgtgaagggaatcagatggctttgaaaattttatg gctatgtgaacatttactataaaatataagaaaagaaattagtaaaagcc taaatgtaaataaaagagacaagataaactaattattctataattgcaca gtgggatgcaattcagtcattaaaataacattacataaataattaataaa taggtcaatattaatattcagcatctattatcaacttaaaaagcaagtta agaagtgacaaatacaatgttattatttccatcagtagctcagagtttgg caggaggggtagggccacatggatttctctctaatctaggattgaccaat acaggcccattgcaggctacctttgctgcggtaagactgtgattacatta gtcatgtcatgcccagaagacaagattccataggcccactcccaacccca cctgatcctctggctctaatattattttctactgtttcaagaaaaagggc ttttttaattggagtttagttgaagcatataaagtatctgaatagactac aaacataatttaatgtgtactttgagtccgttatgttgctctttcttaga ggcacagcacaaagggaggggagattagcaattgatgagaagacaggttg catattctatgtatgccaaataaacaattttggactttcaacccatggta tagatgcttaatgggataa	gaattctgtaagcaaagactaatgggctatcctaacaagaacttggaaga gtagtaccgaatattattcagattataaaggcccagctaaagacatttca gaggggataagttatcgtctgggggatagagaccattcttgtgatatttt aattgtgactgctttcctggccttgtcctaaaattctgccagaggtcaaa ttgaatttctttttgagtaattttgttggtagaagaaatttcagaagagc ctaatattgactctgttatatgattttaggaatcacatttattgaaagtc tacaatgaaaaagagcaagcatcatcaacaacaaaacaggtataaaaaat gtatggctttgggagaaaaagagcaatgggaaattaaatgttggagacaa tgtttgtgctgaaagacactagaaaaaatgtaaggaagggagtattgctc tcaaggtgagaccccacacaactattcttagaatttataaaaagaaaagg ctaaagggatttccttcacttaaaacacttaattagatggtggttacaag attgaatacatttttcaatcttatcaaatgcctcagtttttttcaaacat tttaaaaagacatcataaccaaaacaacatattaaacaaagtacttattg gggttcatgacttcataaaggttagagtccatgaccattgtgatatagaa cattgcagtgggtagcaagtgggagcactgaattacaattacaatggaaa tcttataaaatattaatttaatgtgggctacaggttttgtccccaccagg cagctgaacttgacaggctttggccaagcagttcaggccttagagtcata aaggtgcataataaaggagttaatcaacttcctccaagtttaggaagctg ctaagtccctgcataaagctgtgaaaatggaagcctagattttgttggag atccaggatggagaatgtataactgtgtgtattctcccattagaagccaa aaagtgagatataccca
quality values	Open. Hide. 46 47 16 39 53 20 10 30 53 53 50 50 61 61 61 53 61 53 61 47 38 55 55 50 50 35 10 22 10 14 10 28 11 10 13 17 52 52 41 47 52 41 49 59 61 59 61 61 59 59 59 59 61 61 61 61 59 61 59 61 61 61 61 61 59 44 55 59 59 61 61 59 59 59 59 59 59 41 59 59 59 61 61 59 61 61 61 59 61 61 59 61 59 61 61 61 59 59 59 59 59 59 59 59 59 61 61 61 61 61 61 61 61 55 44 59 59 59 59 61 61 52 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 59 59 61 61 61 61 61 59 61 61 61 61 59 59 61 61 59 61 61 61 61 61 59 61 61 59 61 61 59 61 59 61 61 61 61 61 61 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 55 55 59 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 59 61 59 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 49 59 59 59 59 59 59 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 55 61 61 61 61 61 61 61 61 61 47 55 61 55 61 61 61 55 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 52 53 53 53 61 61 61 47 47 50 53 50 43 38 50 43 52 52 61 61 61 52 61 31 61 61 61 61 61 61 47 52 50 61 61 61 61 61 39 61 53 53 47 50 52 43 46 53 61 52 42 61 31 38 61 61 61 37 23 50 47 61 61 52 61 61 61 42 61 34 61 61 34 61 50 61 47 61 61 42 39 61 46 42 53 50 46 46 50 61 61 53 52 53 45 52 47 61 42 38 45 53 47 22 35 24 53 57 53 45 45 53 53 38 47 27 22 47 45 50 42 28 10 31 33 50 53 53 47 47 57 53 43 45 50 53 34 32 53 30 53 50 43 43 18 43 57 45 50 52 38 28 47 50 26 39 33 50 28 47 38 47 43 45 42 42 38 40 53 24 53 47 35 43 41 50 17 53 26 37 50 29 40 31 25 27 27 28 38 42 15 47 36 50 18 22 50 37 25 23 22 10 18 17 31 34 47 27 45 57 33 36 47 42 28 53 27 22 11 32 42 20 50 45 34 31 31 37 37 34 21 42 14 57 53 6 15 21 38 52 17 53 8 53 8 33 10 33 17 41 41 37 37 19 12 38 36 29 31 57 57 57 57 30 36 42 38 13 23 42 40 28 38 57 37 31 18 18 53 36 33 30 25 32 20 11 5 6 7 39 28 35 31 20 11 17 29 29 33 33 14 21 22 30 24 20 31 31 9 53 29 22 19 40 27 33 22 32 25 23 33 40 53 31 48 35 25 32 19 33 33 28 40 31 15 15 40 30 33 16 23 22 29 24 53 27 19 57 24 17 53 38 14 4 4 17 15 53 17 35 13 16 32 25 10 29 12 13 30 30 17 18 33 29 31 18 45 44 30 30 14 29 8 19 15 12 21 12 12 13 20 21 5 6 11 7 4 12 21 17 8 7 7 36 18 11 16 25 16 32 12 18 6 18 24 28 34 14 18 20 19 22 29 20 20 10 19 20 10 14 20 4 11 8 10 8 12 26 26 9 13 7 17 29 30 19 13 10 9 15 46 32 32 28 30 16 7 7 18 8 16 11 8 18 11 22 7 7 11 5 21 29 15 19 14 28 29	Open. Hide. 61 61 55 47 36 43 24 20 25 25 19 26 32 36 59 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 59 61 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 59 59 59 59 59 61 61 61 61 61 61 59 61 61 61 61 59 61 59 61 61 61 61 59 49 59 37 44 44 55 59 59 59 59 61 59 61 61 61 61 61 59 61 61 61 61 59 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 59 61 59 61 61 61 61 59 55 55 59 61 61 55 44 55 59 61 59 59 59 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 59 59 44 55 59 61 61 61 61 61 61 59 52 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 55 61 61 61 61 55 61 55 61 61 55 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 55 55 43 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 55 61 61 61 47 43 52 52 50 50 52 52 53 50 61 61 61 50 61 61 61 53 61 61 61 61 61 61 61 61 53 50 61 61 61 61 50 61 61 39 53 50 61 35 53 53 61 33 61 61 61 61 50 53 53 50 61 61 61 61 61 43 45 61 61 53 61 61 53 53 47 42 47 47 47 61 31 53 61 50 45 53 47 61 61 61 61 61 61 50 40 50 53 53 39 53 57 57 43 50 53 47 53 53 52 47 50 36 47 47 38 53 42 45 47 47 32 53 47 47 43 22 47 47 45 52 52 53 40 38 53 47 47 43 47 47 47 39 43 45 53 47 43 47 47 50 57 57 31 27 43 45 24 38 45 42 38 36 53 38 14 42 24 53 8 7 20 20 53 52 50 52 30 42 42 41 28 38 41 36 18 47 23 52 32 53 50 50 41 40 32 40 53 42 30 34 52 32 35 41 39 39 42 32 45 30 25 47 27 42 41 37 45 42 53 20 42 26 46 26 9 28 33 42 37 30 52 38 34 38 28 29 23 24 50 50 40 40 29 34 53 52 52 47 46 33 34 39 16 35 33 36 29 50 50 38 27 23 40 38 14 27 37 53 38 31 37 27 39 24 33 47 53 36 33 17 33 33 30 53 15 29 24 36 37 27 18 28 32 21 32 17 13 5 7 11 14 11 14 33 48 19 28 17 11 12 40 40 25 30 15 23 27 9 35 36 25 27 28 19 17 24 27 20 27 28 16 27 44 29 26 10 18 8 8 16 20 22 8 9 11 5 6 11 16 23 45 5 8 6 7 7 5 17 22 32 20 11 15 30 25 17 16 17 9 13 5 7 5 11 9 14 27 18 45 26 22 17 25 22 10 7 29 39 39 28 8 26 18 23 16 23 11 16 18 22 27 29 28 17 9 29 29 20 17 11 12 8 5 13 10 30 17 11 18 14 24 26 14 11 22 14 16 7 10 5 25 9 11 26 7 22 19 8 10 10 20 28 8 17 31 5 11 10 19 11 29 18 41 41 11 16 13 28 11 11 27 11 6 14 8 12 10 12 7 7 18 12 8 17 18 7 15 6 5 17 6 10 10 13 16 8 22 36 5 14 11 20 5 13 21 7 18 9 10 18 5 9 10 5 5 8 9 12 19 7 6 5 8 15 12 7 6

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_161891149_161892168
seq2: B6Ng01-023G23.b_43_1061

seq1  GAATTCAGCTCTGCTTGGACAGTTAAGCATATAGCACAACAACAGCTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTCTGCTTGGACAGTTAAGCATATAGCACAACAACAGCTCAT  50

seq1  AAAATCCCATATCCCTCAGGGTTCCTAGATATCACTGGAAGTAAACAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCCATATCCCTCAGGGTTCCTAGATATCACTGGAAGTAAACAAAA  100

seq1  TACAGAGTAAGCTCTTAAGACGCGTTGCTTGTAAGCGAAGGCAGAGGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGTAAGCTCTTAAGACGCGTTGCTTGTAAGCGAAGGCAGAGGGAG  150

seq1  AGAGAGAAGAAAAGGGAGAGGGAGGAGACAGCAGAGACAAGAGAGACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAAGAAAAGGGAGAGGGAGGAGACAGCAGAGACAAGAGAGACAGA  200

seq1  GACAGGGAGAATAAACCAAACAAAGGAAATTTGGCAATGCATATTGTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGAGAATAAACCAAACAAAGGAAATTTGGCAATGCATATTGTGAG  250

seq1  AATTTTTCATTTGTATATATTTTAATCTAATAATATATTTCTGGGAGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTCATTTGTATATATTTTAATCTAATAATATATTTCTGGGAGTTT  300

seq1  ATCCTAAGGGATAAGTGTGAAGGGAATCAGATGGCTTTGAAAATTTTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAAGGGATAAGTGTGAAGGGAATCAGATGGCTTTGAAAATTTTATG  350

seq1  GCTATGTGAACATTTACTATAAAATATAAGAAAAGAAATTAGTAAAAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGTGAACATTTACTATAAAATATAAGAAAAGAAATTAGTAAAAGCC  400

seq1  TAAATGTAAATAAAAGAGACAAGATAAACTAATTATTCTATAATTGCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTAAATAAAAGAGACAAGATAAACTAATTATTCTATAATTGCACA  450

seq1  GTGGGATGCAATTCAGTCATTAAAATAACATTACATAAATAATTAATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGATGCAATTCAGTCATTAAAATAACATTACATAAATAATTAATAAA  500

seq1  TAGGTCAATATTAATATTCAGCATCTATTATCAACTTAAAAAGCAAGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCAATATTAATATTCAGCATCTATTATCAACTTAAAAAGCAAGTTA  550

seq1  AGAAGTGACAAATACAATGTTATTATTTCCATCAGTAGCTCAGAGTTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGACAAATACAATGTTATTATTTCCATCAGTAGCTCAGAGTTTGG  600

seq1  CAGGAGGGGTAGGGCCACATGGATTTCTCTCTAATCTAGGATTGACCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGGGTAGGGCCACATGGATTTCTCTCTAATCTAGGATTGACCAAT  650

seq1  ACAGGCCCATTGCAGGCTACCTTTGCTGCGGTAAGACTGTGATTACATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCCCATTGCAGGCTACCTTTGCTGCGGTAAGACTGTGATTACATTA  700

seq1  GTCATGTCATGCCCAGAAGACAAGATTCCATAGGCCCACTCCCAACCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGTCATGCCCAGAAGACAAGATTCCATAGGCCCACTCCCAACCCCA  750

seq1  CCTGATCCTCTGGCTCTAATATTA-TTTCTACTG-TTCAAGAAAAAGGGC  798
      |||||||||||||||||||||||| ||||||||| |||||||||||||||
seq2  CCTGATCCTCTGGCTCTAATATTATTTTCTACTGTTTCAAGAAAAAGGGC  800

seq1  -TTTTTAATTGGAGTTTAGTTGAAGCATATAAAGTATCTGAATAGACTAC  847
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAATTGGAGTTTAGTTGAAGCATATAAAGTATCTGAATAGACTAC  850

seq1  AAACATAATTTAATGTGTACTTTGAGTCCGTTATGTTGCTTCTTTCTAAG  897
      ||||||||||||||||||||||||||||||||||||||| ||||||| ||
seq2  AAACATAATTTAATGTGTACTTTGAGTCCGTTATGTTGC-TCTTTCTTAG  899

seq1  AGGCACAGCACAAAGGGAGGGGAGATTAGCAATTGATGTAGAAGACAGGT  947
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGGCACAGCACAAAGGGAGGGGAGATTAGCAATTGATG-AGAAGACAGGT  948

seq1  TGCAATATTCTATGTATGCCAAATAAACCAATTTTGACTTTCAACCCAAT  997
      ||| |||||||||||||||||||||||| | ||| |||||||||||||  
seq2  TGC-ATATTCTATGTATGCCAAATAAACAATTTTGGACTTTCAACCCATG  997

seq1  GTATAGATGCTTTAATGGGATAA  1020
      |||||||||| ||||||||||||
seq2  GTATAGATGC-TTAATGGGATAA  1019

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information