BAC Information

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BAC

Clone NameB6Ng01-023M01
ChromosomeX (Build37)
Map Location 150,749,791 - 150,782,358
singlet/doubletdoublet
Overlap gene4930524N10Rik
Upstream geneKlf8, EG635136, Ubqln2, Cypt3, LOC100039998, LOC667241, Kctd12b, 2210013O21Rik, Smt3h1-ps, Spin2, 4921511M17Rik, OTTMUSG00000019268, LOC625650, LOC100040020, EG546397, OTTMUSG00000019256, EG434874, LOC635580, EG625767, LOC270665, LOC100040076
Downstream geneEG434879, LOC667313, 4930542N07Rik, EG434881, LOC100040899, LOC667331, LOC100040925, LOC100040937, Magea6, Magea3, LOC626034, Magea8, Magea2, Magea5, Magea1, 1700042B14Rik, LOC245676, Amd-ps1, LOC667369, Sat1, Acot9, LOC667383, Prdx4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023M01.bB6Ng01-023M01.g
ACCDH855585DH855586
length1,0111,006
definitionDH855585|Mus musculus domesticus DNA, BAC clone: B6Ng01-023M01, 5' end.DH855586|Mus musculus domesticus DNA, BAC clone: B6Ng01-023M01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,781,841 - 150,782,358)(150,749,791 - 150,750,476)
sequence
gaattcctagggggctgccaccatcatacatgaacccaagtatcccattg
ctgaatttctgagaaatatctgtagttattccatcctcaattttgtaata
aaattgccctatttttattatacagaattgagactaagactgggggtaca
gctgcggatttattcatctctgccagtgactctagattattttcaattcc
acctcaagtgagtgactataacatacatttagcttgaattcatgaacagc
tttcactttaatattattggtaacatatagagcctggatatcaagcaggc
tcatactaggtctttccagttcaccaaatcaaggaaggaggaaagaaaag
gaacagtaaatatatacagagaattataagtactaagaatagttgcagaa
atggtatcattgggtgcttgtaccaaagaagtataacttggggtatctca
gtactcatactggggcccacaagagggcatagcctcaaactctgagactc
agtaaacctggcaggattttcttccttgttatcaggggtcccaggcatct
tgaacttagtgtggggtgtctccaacactcttcatgttaaaagtattaga
gagatcagggatacagggcacacagctaaacataatcaaagtaatataca
ccaagtaaatagccaacactaaaacaatggaaagaaacttaaatcaattt
cactaaaatcaagaacaagacaaggctgcccactctctccctatctattc
aatatactacttgaaattctagccatagaaataagacaactaaaggaaat
aaaggggaaacaacaggaaaggaagatgtcaaagtatcattatttagatg
atatgataggatacataatgatcccaaagatactaccagagaactcctac
acctaacaaacacttcagcatgtggctgaatactaattaactcaaagaaa
ttagtagtagccctcctttaacaatgataatggatcagatgagattatgg
aaacttcatgg
gaattccttggtcttgtggagtctctataacccagcacagcagaatgcta
tggtgctgaggtgggaggaatgggtagggcagcactctcattgaagcagg
gagtatggcagaagtgatagggtgtctaacaaggtaggggaatgacatct
aaaatataaataaataaaattttatatatacacacacatgtattcaaaaa
tacttacaaactgaattcaggaacatatcaaaaacattatctggcttggt
aaagtagctagccttcacctcagggatataggcataattgaaaagtagaa
aaatccatcaatgtaatctaccacataagaaaactaacagaaaaaaatca
tatgatctcattagatgatgaaaggcttttataaaatctaacaccccctt
catgttaaaattcttagagatatcgtggatagaaggcactgcataatcaa
agaaatattcatcatgcaaaaagccaacatcaaattaatggaaagaaaat
taaagcaactccactaaaatcagggacaagagaaggctgcccactctctt
tctatgtattcaatatagttcttgaagttccagacagagcaatgatacaa
tgaaagatgatcaagtggatataaattggaaaggaagaaatcaatgtatc
actgtttgtggatgatatgagtgcatatataagtgaactccaaaattcta
ccagagaacttctacagctggtaaacaccttcagcaaaaaaataagtagc
tctcctttgtacaaatgatatatggactgagagagaaattaggaaagcaa
cactctttacagtagccaagaataatataaaatatcttggtgcaattcta
accaagcaagtgagatatctgtatgatagaagctttaagttcctcataaa
agaattaaagaatttatctgaggatgcaagatatcccatgctcatagata
ggtaggattaccataatgaaaatggccatcctacaaaagcatctacagat
tcaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_150781841_150782358
seq2: B6Ng01-023M01.b_43_560 (reverse)

seq1  AATCCTGCCAGGTTTACTGAGTCTCAGAGTTTGAGGCTATGCCCTCTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGCCAGGTTTACTGAGTCTCAGAGTTTGAGGCTATGCCCTCTTGT  50

seq1  GGGCCCCAGTATGAGTACTGAGATACCCCAAGTTATACTTCTTTGGTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCCAGTATGAGTACTGAGATACCCCAAGTTATACTTCTTTGGTACA  100

seq1  AGCACCCAATGATACCATTTCTGCAACTATTCTTAGTACTTATAATTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCCAATGATACCATTTCTGCAACTATTCTTAGTACTTATAATTCTC  150

seq1  TGTATATATTTACTGTTCCTTTTCTTTCCTCCTTCCTTGATTTGGTGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATATTTACTGTTCCTTTTCTTTCCTCCTTCCTTGATTTGGTGAAC  200

seq1  TGGAAAGACCTAGTATGAGCCTGCTTGATATCCAGGCTCTATATGTTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGACCTAGTATGAGCCTGCTTGATATCCAGGCTCTATATGTTACC  250

seq1  AATAATATTAAAGTGAAAGCTGTTCATGAATTCAAGCTAAATGTATGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATATTAAAGTGAAAGCTGTTCATGAATTCAAGCTAAATGTATGTTA  300

seq1  TAGTCACTCACTTGAGGTGGAATTGAAAATAATCTAGAGTCACTGGCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCACTCACTTGAGGTGGAATTGAAAATAATCTAGAGTCACTGGCAGA  350

seq1  GATGAATAAATCCGCAGCTGTACCCCCAGTCTTAGTCTCAATTCTGTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATAAATCCGCAGCTGTACCCCCAGTCTTAGTCTCAATTCTGTATA  400

seq1  ATAAAAATAGGGCAATTTTATTACAAAATTGAGGATGGAATAACTACAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATAGGGCAATTTTATTACAAAATTGAGGATGGAATAACTACAGA  450

seq1  TATTTCTCAGAAATTCAGCAATGGGATACTTGGGTTCATGTATGATGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTCAGAAATTCAGCAATGGGATACTTGGGTTCATGTATGATGGTG  500

seq1  GCAGCCCCCTAGGAATTC  518
      ||||||||||||||||||
seq2  GCAGCCCCCTAGGAATTC  518

seq1: chrX_150749791_150750476
seq2: B6Ng01-023M01.g_65_750

seq1  GAATTCCTTGGTCTTGTGGAGTCTCTATAACCCAGCACAGCAGAATGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGGTCTTGTGGAGTCTCTATAACCCAGCACAGCAGAATGCTA  50

seq1  TGGTGCTGAGGTGGGAGGAATGGGTAGGGCAGCACTCTCATTGAAGCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCTGAGGTGGGAGGAATGGGTAGGGCAGCACTCTCATTGAAGCAGG  100

seq1  GAGTATGGCAGAAGTGATAGGGTGTCTAACAAGGTAGGGGAATGACATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATGGCAGAAGTGATAGGGTGTCTAACAAGGTAGGGGAATGACATCT  150

seq1  AAAATATAAATAAATAAAATTTTATATATACACACACATGTATTCAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATAAATAAATAAAATTTTATATATACACACACATGTATTCAAAAA  200

seq1  TACTTACAAACTGAATTCAGGAACATATCAAAAACATTATCTGGCTTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACAAACTGAATTCAGGAACATATCAAAAACATTATCTGGCTTGGT  250

seq1  AAAGTAGCTAGCCTTCACCTCAGGGATATAGGCATAATTGAAAAGTAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGCTAGCCTTCACCTCAGGGATATAGGCATAATTGAAAAGTAGAA  300

seq1  AAATCCATCAATGTAATCTACCACATAAGAAAACTAACAGAAAAAAATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCATCAATGTAATCTACCACATAAGAAAACTAACAGAAAAAAATCA  350

seq1  TATGATCTCATTAGATGATGAAAGGCTTTTATAAAATCTAACACCCCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATCTCATTAGATGATGAAAGGCTTTTATAAAATCTAACACCCCCTT  400

seq1  CATGTTAAAATTCTTAGAGATATCGTGGATAGAAGGCACTGCATAATCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTAAAATTCTTAGAGATATCGTGGATAGAAGGCACTGCATAATCAA  450

seq1  AGAAATATTCATCATGCAAAAAGCCAACATCAAATTAATGGAAAGAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATATTCATCATGCAAAAAGCCAACATCAAATTAATGGAAAGAAAAT  500

seq1  TAAAGCAACTCCACTAAAATCAGGGACAAGAGAAGGCTGCCCACTCTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAACTCCACTAAAATCAGGGACAAGAGAAGGCTGCCCACTCTCTT  550

seq1  TCTATGTATTCAATATAGTTCTTGAAGTTCCAGACAGAGCAATGATACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTATTCAATATAGTTCTTGAAGTTCCAGACAGAGCAATGATACAA  600

seq1  TGAAAGATGATCAAGTGGATATAAATTGGAAAGGAAGAAATCAATGTATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGATGATCAAGTGGATATAAATTGGAAAGGAAGAAATCAATGTATC  650

seq1  ACTGTTTGTGGATGATATGAGTGCATATATAAGTGA  686
      ||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTGTGGATGATATGAGTGCATATATAAGTGA  686