BAC Information

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BAC

Clone NameB6Ng01-026C08
ChromosomeX (Build37)
Map Location 154,573,620 - 154,673,455
singlet/doubletdoublet
Overlap geneEG667483, LOC671033
Upstream genePhex, Gm1947, Sms, LOC100041181, EG625253, Mbtps2, LOC100040239, LOC667460, LOC667465, Smpx, Klhl34, Cnksr2
Downstream geneLOC667487, LOC436243, LOC100040371
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026C08.bB6Ng01-026C08.g
ACCDH857271DH857272
length1,155740
definitionDH857271|Mus musculus domesticus DNA, BAC clone: B6Ng01-026C08, 5' end.DH857272|Mus musculus domesticus DNA, BAC clone: B6Ng01-026C08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(154,573,620 - 154,574,784)(154,672,893 - 154,673,455)
sequence
gaattctgtgcttctcgtgacaatggtgatggtaatttaaatcaagagaa
taattaactgtcagttctcatggcaacacctgctgaaaatatttgtgagg
gaccgcaatgtatactacactattaaatgttcatgtatgtttaaacttac
tgaaaagtgacgatgtctctcttgtctcagacttggacatatttatttct
agtatcctccaaaactctctgtcctagggtaagctgaccctctaaatctg
tgacagggagaaaagtaactgccaaagtaaaatgctgtgcccttgagaac
agagaaaaggtgaatcatttataacagaggttgttatttttcccacggtg
taaaaatgcctgcagtggaaaagcctgaagctcagccatggggaaattgc
tctgctctgctgagcttggaaaactttcggtcagaagcatggctatttta
gcctagcttcctcaatactttctgatggactttgtaagcccccaatctca
cgatgttattagctgcatttataatgtctagtatcccccacacaagaaac
ctagagtactttgattaagagatcaaataaaagtaaataaaacaaaccag
acagcaagcagctcatctgtcatcatccatctgaccacagcctcctcttc
cccctcttcctccactcctcccagttccctctcccccagatccactgctc
ctcagtttcccagctgaaaggagcaggcctcccagggatggcaacataac
ctggtaaccaagatacaataaagactaggcacaaacccttgtatcaattt
tgcttgctacatgcttaatgaactcacttattctaaactgaaaacatagc
tattgtagattattctctataggacagggtcacaccttcatcactttctg
gagaaacaaattcacaacagaaaaagttattaattcttacacattagtta
tgtttagtgccctgcaaattatttgaaattaatgcctaacacatttatta
tctcaccattactgtgagtctgaaatctggctcacagattctcataaagc
tgtaattaagatggtagcaaagattgggtcactttaggcccactaggaac
atggcctacagttcctcaatagctcacacacagaaatcatttttcttttt
gttgg
gaattccaatgtgctttaaatcaggcctgcaagttcctttagttgtgtct
ttatcttggtaatggggagatcatggcatgctggacttgtgcagaataaa
ccactctgcgtttacatactatttgagtctggggtgacattctttagtga
atcacaaacccttaaaattggtatggtggtttcttcctggatacctgccc
ataccaggaattttctatttcttgacatttaaaatgtggactctgggact
ttctagtggctccccccagtcgtcgtcccccccaccaccgctacattttt
ctattcattttcctgaccctttggacccttctttcctatctcttcccata
cctgatcctgcccccttccccccctcctttctccctcccagacccctccc
tccctccatctcccatgattattttgccccccccccttctaagtaggact
gaaacatccacactttggtcttcgttcatgttaagcttcatacggtctgt
gagttttatcgtgggtattctgagcttttgtgctaatatctacttatcag
tgagtacatatcatttgtgtccttttgggtctgggttacctcactcaaga
tgatctttttctagtggatggttctagtagagaagggaagctgtatattc
tagtatctaattgaaattctagcctccaacttttactgggagcagcagtc
caccatactttctgtgctgggtgatttgggtctgagttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_154573620_154574784
seq2: B6Ng01-026C08.b_47_1201

seq1  GAATTCTGTGCTTCTCGTGACAATGGTGATGGTAATTTAAATCAAGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGCTTCTCGTGACAATGGTGATGGTAATTTAAATCAAGAGAA  50

seq1  TAATTAACTGTCAGTTCTCATGGCAACACCTGCTGAAAATATTTGTGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAACTGTCAGTTCTCATGGCAACACCTGCTGAAAATATTTGTGAGG  100

seq1  GACCGCAATGTATACTACACTATTAAATGTTCATGTATGTTTAAACTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCGCAATGTATACTACACTATTAAATGTTCATGTATGTTTAAACTTAC  150

seq1  TGAAAAGTGACGATGTCTCTCTTGTCTCAGACTTGGACATATTTATTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGTGACGATGTCTCTCTTGTCTCAGACTTGGACATATTTATTTCT  200

seq1  AGTATCCTCCAAAACTCTCTGTCCTAGGGTAAGCTGACCCTCTAAATCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCCTCCAAAACTCTCTGTCCTAGGGTAAGCTGACCCTCTAAATCTG  250

seq1  TGACAGGGAGAAAAGTAACTGCCAAAGTAAAATGCTGTGCCCTTGAGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGGGAGAAAAGTAACTGCCAAAGTAAAATGCTGTGCCCTTGAGAAC  300

seq1  AGAGAAAAGGTGAATCATTTATAACAGAGGTTGTTATTTTTCCCACGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAAGGTGAATCATTTATAACAGAGGTTGTTATTTTTCCCACGGTG  350

seq1  TAAAAATGCCTGCAGTGGAAAAGCCTGAAGCTCAGCCATGGGGAAATTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGCCTGCAGTGGAAAAGCCTGAAGCTCAGCCATGGGGAAATTGC  400

seq1  TCTGCTCTGCTGAGCTTGGAAAACTTTCGGTCAGAAGCATGGCTATTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCTGCTGAGCTTGGAAAACTTTCGGTCAGAAGCATGGCTATTTTA  450

seq1  GCCTAGCTTCCTCAATACTTTCTGATGGACTTTGTAAGCCCCCAATCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGCTTCCTCAATACTTTCTGATGGACTTTGTAAGCCCCCAATCTCA  500

seq1  CGATGTTATTAGCTGCATTTATAATGTCTAGTATCCCCCACACAAGAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGTTATTAGCTGCATTTATAATGTCTAGTATCCCCCACACAAGAAAC  550

seq1  CTAGAGTACTTTGATTAAGAGATCAAATAAAAGTAAATAAAACAAACCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGTACTTTGATTAAGAGATCAAATAAAAGTAAATAAAACAAACCAG  600

seq1  ACAGCAAGCAGCTCATCTGTCATCATCCATCTGACCACAGCCTCCTCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAAGCAGCTCATCTGTCATCATCCATCTGACCACAGCCTCCTCTTC  650

seq1  CCCCTCTTCCTCCACTCCTCCCAGTTCCCTCTCCCCCAGATCCACTGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCTTCCTCCACTCCTCCCAGTTCCCTCTCCCCCAGATCCACTGCTC  700

seq1  CTCAGTTTCCCAGCTGAAAGGAGCAGGCCTCCCAGGGATGGCAACATAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTTCCCAGCTGAAAGGAGCAGGCCTCCCAGGGATGGCAACATAAC  750

seq1  CTGGTAACCAAGATACAATAAAGACTAGGCACAAACCCTTGTATCAATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAACCAAGATACAATAAAGACTAGGCACAAACCCTTGTATCAATTT  800

seq1  TGCTTGCTACATGCTTAATGAACTCACTTATTCTAAACTGAAAACATAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGCTACATGCTTAATGAACTCACTTATTCTAAACTGAAAACATAGC  850

seq1  TATTGTAGATTATTCTCTATAGGACAGGGTCACACCTTCATCACTTTCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTAGATTATTCTCTATAGGACAGGGTCACACCTTCATCACTTTCTG  900

seq1  GAGAAACAAATTCACAACAGAAAAAAGTTATTAAATTCTTACACATTAGT  950
      |||||||||||||||||||| ||||||||||| |||||||||||||||||
seq2  GAGAAACAAATTCACAACAG-AAAAAGTTATT-AATTCTTACACATTAGT  948

seq1  TATTGTTTAGTGCCCTGCAAATTATTTGAAATTAATGCCTTAACACATTT  1000
      || |||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TA-TGTTTAGTGCCCTGCAAATTATTTGAAATTAATGCC-TAACACATTT  996

seq1  ATTATCTCACCATTACTGTGAGTCTGAAATCTGGCTCACAGATTCTCATA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTCACCATTACTGTGAGTCTGAAATCTGGCTCACAGATTCTCATA  1046

seq1  AAGCTGTAATTAAGATGGTAGCAAAGATTGTGTCACTTTAGGCTCAACTA  1100
      |||||||||||||||||||||||||||||| |||||||||||| | ||| 
seq2  AAGCTGTAATTAAGATGGTAGCAAAGATTGGGTCACTTTAGGC-CCACT-  1094

seq1  AGGAAGCATGGGCCTACAAGTTCACTCAAATAGCTCAACAACAGAATTCA  1150
      ||||| ||| ||||||| ||||| ||| |||||||||   |||||| |||
seq2  AGGAA-CAT-GGCCTAC-AGTTC-CTC-AATAGCTCACACACAGAAATCA  1139

seq1  TTTTTCTTTTT-TTGG  1165
      ||||||||||| ||||
seq2  TTTTTCTTTTTGTTGG  1155

seq1: chrX_154672893_154673455
seq2: B6Ng01-026C08.g_243_805 (reverse)

seq1  AAACTCAGACCCAAATCACCCAGCACAGAAAGTATGGTGGTACTGCTGCT  50
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAACTCAGACCCAAATCACCCAGCACAGAAAGTATGGTGG-ACTGCTGCT  49

seq1  ACCAGTAAAAGTTGGAGGCTAGAATTTCAATTAGATACTAGAATATACAG  100
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTAAAAGTTGGAGGCTAGAATTTCAATTAGATACTAGAATATACAG  99

seq1  CTTCCCTTCTCTACTAGAACCATCCACTAG-AAAAGATCATCTTGAGTGA  149
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTTCCCTTCTCTACTAGAACCATCCACTAGAAAAAGATCATCTTGAGTGA  149

seq1  GGTAACCCAGACCCAAAAGGACACAAATGATATGTACTCACTGATAAGTA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACCCAGACCCAAAAGGACACAAATGATATGTACTCACTGATAAGTA  199

seq1  GATATTAGCACAAAAGCTCAGAATACCCACGATAAAACTCACAGACCGTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTAGCACAAAAGCTCAGAATACCCACGATAAAACTCACAGACCGTA  249

seq1  TGAAGCTTAACATGAACGAAGACCAAAGTGTGGATGTTTCAGTCCTACTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTTAACATGAACGAAGACCAAAGTGTGGATGTTTCAGTCCTACTT  299

seq1  AGAAGGGGGGGGGGCAAAATAATCATGGGAGATGGAGGGAGGGAGGGGTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGGGGGGGGGCAAAATAATCATGGGAGATGGAGGGAGGGAGGGGTC  349

seq1  TGGGAGGGAGAAAGGAGGGGGGGAAGGGGGCAGGATCAGGTATGGGAAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGGAGAAAGGAGGGGGGGAAGGGGGCAGGATCAGGTATGGGAAGA  399

seq1  GATAGGAAAGAAGGGTCCAAAGGGTCAGGAAAATGAATAGAAAAATGTAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGAAAGAAGGGTCCAAAGGGTCAGGAAAATGAATAGAAAAATGTAG  449

seq1  CGGTGGTGGGGGGGACGACGACTGGGGGGAGCCACTAGAAAGTCCCAGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGGTGGGGGGGACGACGACTGGGGGGAGCCACTAGAAAGTCCCAGAG  499

seq1  TCCACATTTTAAATGTCAAGAAATAGAAAATTCCTGGTATGGGCAGGTAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATTTTAAATGTCAAGAAATAGAAAATTCCTGGTATGGGCAGGTAT  549

seq1  CCAGGAAGAAACCA  563
      ||||||||||||||
seq2  CCAGGAAGAAACCA  563