BAC Information

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BAC

Clone NameB6Ng01-026E18
ChromosomeX (Build37)
Map Location 113,074,742 - 113,075,840
singlet/doubletsinglet
Overlap genenone
Upstream geneEG664969, EG546362, LOC100039255, LOC623913, LOC546363
Downstream geneLOC100039277, Cpxcr1, EG624153, LOC100039300, EG665045
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026E18.bB6Ng01-026E18.g
ACCDH857383DH857384
length1,076976
definitionDH857383|Mus musculus domesticus DNA, BAC clone: B6Ng01-026E18, 5' end.DH857384|Mus musculus domesticus DNA, BAC clone: B6Ng01-026E18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgaaaacttatactttgtttgctacaaatacaattataatcc
taatatatatgcttacattacatttccttgccttacttatttaccaagtg
tttccagaagaataatctttgataataaaaggagacacttccctcccttt
gtttctatccttgaagaaagcattacatcacacattactacattaattgg
atggattacatgtttttgctgatttgaataattaaatattgtattaggtt
tggtgaaaagatgtattttttaattttaacaaatgtttgattagtattta
gtgaattgatcacattttttcatttagtatatgactaatacattataatt
acaattttaagttgttgtatcacaaatagaaattcaacttaagtgtattt
tgtttctgtgtattgttggacctgatttttctaactagtttctataattt
tttgtttgttggctttctttctttattctttgtttgtttgtttgtttttt
gaaacagggtttctctgtataaccctgactgtcgtggaactcactttgta
gtccaggctggtcttgaactcagaaatctgcctgtctctgcttcctgagt
gctggaattaaaggcatgcactaccacacccagctctttctttattctta
agaaatattttctttcttgtaattttattttaagtagaatttatgcaaac
atcttaggaaagttctcattctcttctgatttctgaatgaaatgcagaat
gtctattaattgattatatgtaattggtcatgcttcttcatgagcatatg
tttctataatttccatttattgttgtgggataatagtaatagttattttt
ccacagttattatgttattccatatctgcaaatattatttatactttctg
tacgacttttattctgttgttgctgctgttgtgttttgcatcgtagacaa
ttctactaaatgtcattcaaggtaccttaccaatgcttttctcattggct
gttgtactgaatgttggcaagaccctttaaacggctcggtttctcaattt
tcaggttctttaaaggttcatttttc
gaattctttgtttagctctgtaccccatttttaatggggtaatttgattt
tctggagtccaccttcttgagttcttcatatatattggattttagtcccc
tatctgatttagaataggtcgaatctcagggttgttttgatttgcatttc
cctgatgagttgtaggatgccaactcgaagatggcaccagattccggtgt
gcttgtgtagtaaacaacaccactgtgcaggcgttaatgggagattggtg
cctacccctccagagtgggtgcatactaattaggcatcaacagactgacc
aatcccaggaggacacaaagcctttcccctgtgctggggtgtatataagc
agacatccctgggtgcctggggtcccagtagcagcatcaaggcattcctg
ggataaaggctgttaagaagaatccgaccatgttgtgtcttccttgtaag
gatgtttagcatttttaggtgcttctaagccatttggatttcctcagttg
agaattctttctttagctctgtatcccattttttaatagggttatttgtt
tttctggagtctaacttcttgagttctttgtatatattggagtttagccc
tctatcagattttagcattggtaaagatcattttccaaactgttatttgc
cttttttactttatggacagtatcctttgccttacagaaactttgaaata
ttatgaggtccattttcttaatccttgatcttacaacacaagccttgttc
tttgttctgtgtttgtgttctgttcagaattttattccctgtgtccatat
gttcaaggttctgatccccactttctcctctatagtttcagtgtctctgt
ttttattggaggtccttgatccacttagacttgagtttgtacaggaaata
agaatggatcattgccttcttacagaaactgccgttgaaccaccaattgg
agaaaatggcatctttttcctcggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_113074742_113075840
seq2: B6Ng01-026E18.b_48_1123 (reverse)

seq1  GAAAAATGAAAACATTATAAAGAACCTGATAAAATTTGAGAAAACAGAAG  50
      ||||||||  ||| || |||||||||||   ||| |||||||| |   ||
seq2  GAAAAATG--AACCTT-TAAAGAACCTG---AAAATTGAGAAACC--GAG  42

seq1  CAGATTTAAAGGGATACTATGCAAACACTCAAGTACAAACAGCACAAATG  100
      | | |||||||||   || ||| |||| || ||||| |||||  | ||||
seq2  CCG-TTTAAAGGG--TCT-TGCCAACATTC-AGTAC-AACAG--CCAATG  84

seq1  AGAAAAGCATTGGTAAGGTAACCTTGAATGACATTTAGTAGAAATTGTCT  150
      ||||||||||||||||||| ||||||||||||||||||||| ||||||||
seq2  AGAAAAGCATTGGTAAGGT-ACCTTGAATGACATTTAGTAG-AATTGTCT  132

seq1  ACGATGCAAAAACAACAACAGCAGCAACAACAGAATTAAAAGTCGTACAG  200
      |||||||||||   ||||||||||||||||||||| ||||||||||||||
seq2  ACGATGCAAAA--CACAACAGCAGCAACAACAGAA-TAAAAGTCGTACAG  179

seq1  AAAGTATAAAATAATATTTGCAGATATGGAATAACATTAATAACTGTGGA  250
      ||||||| |||||||||||||||||||||||||||| |||||||||||||
seq2  AAAGTAT-AAATAATATTTGCAGATATGGAATAACA-TAATAACTGTGGA  227

seq1  AAAATAACTATTACTATTATCCCACAACAATAAATGGAAATTATAGAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAACTATTACTATTATCCCACAACAATAAATGGAAATTATAGAAAC  277

seq1  ATATGCTCATGAAGAAGCATGACCAATTACATATAATCAATTAATAGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTCATGAAGAAGCATGACCAATTACATATAATCAATTAATAGACA  327

seq1  TTCTGCATTTCATTCAGAAATCAGAAGAGAATGAGAACTTTCCTAAGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCATTTCATTCAGAAATCAGAAGAGAATGAGAACTTTCCTAAGATG  377

seq1  TTTGCATAAATTCTACTTAAAATAAAATTACAAGAAAGAAAATATTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATAAATTCTACTTAAAATAAAATTACAAGAAAGAAAATATTTCTT  427

seq1  AAGAATAAAGAAAGAGCTGGGTGTGGTAGTGCATGCCTTTAATTCCAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAAAGAAAGAGCTGGGTGTGGTAGTGCATGCCTTTAATTCCAGCA  477

seq1  CTCAGGAAGCAGAGACAGGCAGATTTCTGAGTTCAAGACCAGCCTGGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAAGCAGAGACAGGCAGATTTCTGAGTTCAAGACCAGCCTGGACT  527

seq1  ACAAAGTGAGTTCCACGACAGTCAGGGTTATACAGAGAAACCCTGTTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTGAGTTCCACGACAGTCAGGGTTATACAGAGAAACCCTGTTTCA  577

seq1  AAAAACAAACAAACAAACAAAGAATAAAGAAAGAAAGCCAACAAACAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAACAAACAAACAAAGAATAAAGAAAGAAAGCCAACAAACAAAA  627

seq1  AATTATAGAAACTAGTTAGAAAAATCAGGTCCAACAATACACAGAAACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATAGAAACTAGTTAGAAAAATCAGGTCCAACAATACACAGAAACAA  677

seq1  AATACACTTAAGTTGAATTTCTATTTGTGATACAACAACTTAAAATTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACTTAAGTTGAATTTCTATTTGTGATACAACAACTTAAAATTGTA  727

seq1  ATTATAATGTATTAGTCATATACTAAATGAAAAAATGTGATCAATTCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAATGTATTAGTCATATACTAAATGAAAAAATGTGATCAATTCACT  777

seq1  AAATACTAATCAAACATTTGTTAAAATTAAAAAATACATCTTTTCACCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTAATCAAACATTTGTTAAAATTAAAAAATACATCTTTTCACCAA  827

seq1  ACCTAATACAATATTTAATTATTCAAATCAGCAAAAACATGTAATCCATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATACAATATTTAATTATTCAAATCAGCAAAAACATGTAATCCATC  877

seq1  CAATTAATGTAGTAATGTGTGATGTAATGCTTTCTTCAAGGATAGAAACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAATGTAGTAATGTGTGATGTAATGCTTTCTTCAAGGATAGAAACA  927

seq1  AAGGGAGGGAAGTGTCTCCTTTTATTATCAAAGATTATTCTTCTGGAAAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGGGAAGTGTCTCCTTTTATTATCAAAGATTATTCTTCTGGAAAC  977

seq1  ACTTGGTAAATAAGTAAGGCAAGGAAATGTAATGTAAGCATATATATTAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGTAAATAAGTAAGGCAAGGAAATGTAATGTAAGCATATATATTAG  1027

seq1  GATTATAATTGTATTTGTAGCAAACAAAGTATAAGTTTTCAAAGAATTC  1099
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATAATTGTATTTGTAGCAAACAAAGTATAAGTTTTCAAAGAATTC  1076