BAC Information

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BAC

Clone NameB6Ng01-027H10
ChromosomeX (Build37)
Map Location 11,407,690 - 11,538,845
singlet/doubletdoublet
Overlap geneRpl23a-ps, LOC100043945
Upstream geneLOC668982, Ppia-psx_105.1, LOC100042922, LOC100042927, LOC100042929, LOC100042931, OTTMUSG00000016790, LOC100042939, LOC100042943, LOC100042944, LOC100042946, EG236663, 8430439B09Rik, LOC669520
Downstream geneBcor, 2900008C10Rik, LOC385323, LOC100043946, LOC628441, Atp6ap2, LOC668986, EG245347, 1810030O07Rik, Crsp2, LOC668987, LOC245350, Ppia-psx_132.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027H10.bB6Ng01-027H10.g
ACCDH858199DH858200
length722390
definitionDH858199|Mus musculus domesticus DNA, BAC clone: B6Ng01-027H10, 5' end.DH858200|Mus musculus domesticus DNA, BAC clone: B6Ng01-027H10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,407,690 - 11,408,410)(11,538,450 - 11,538,845)
sequence
gaattctcctgccccagtctccagaacgtgtcccaccatgcctagctgat
ccggacactccttctttttaaatacttacatttttatttattttatgtgt
atgagtctttcacttgcatgcatatatgtgctttacacttgtgcctggtg
ctcaaggacattagcagagggtattggatcctttggaactggagttactg
atgattttagctgccatgtggggggttggagataaacccaggtcctcttt
aagagtagcaagtgcttttaactacagagccatttttccagaccctagct
ttttgtttgtttgtttgtttgtttgtttgtttgttgagacagggtttctc
tgtgtagctctggctgtcctggaactcactctgtagaccaggctggcctc
gagctcagaaatccacctgcctctgccttgggagcaagtgtgccaccact
ccccggctagctggaacattcttaagaatacctccgagtgattgtactca
gaggtgacatctacttgagaagagatgtcagccagccaggacttcctaga
ggaagggacagcagatctgtgagttgtaaatccaatgttgcaagcttgtg
cttcttttggtgcctcctctttattaaaatgtgcaccctggctggccaga
tggctctgtaggtgaagaggtccctgctactaagtctgacaacctaatct
tgaaccctggcacctatatgac
atttcacacctaatatttcagggaaggctaactgcttggctgatctctgc
agggagctgtgggggtgccaggctgggagaatccagatgacacacagaaa
ggggaactgggtattgatgatgaaggctgccagtttctttctctgtgtct
gggagtgtgcctctccctggcctgcaagcctgccagacctctggcccttt
cctgaccaagcaatgtggttacagcctcggtgctctaaggtcaggaaagg
taaagaaaacaagatggtgttgcccaagaggcaggactggcagctggtca
ctgagcacacacacaagtcttagctcattgttctcctcgcagacagggaa
gcagatggggtagaggtgggtgcatgggtggaatagaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_11407690_11408410
seq2: B6Ng01-027H10.b_47_768

seq1  GAATTCTCCTGCCCCAGTCTCCAGAACGTGTCCCACCATGCCTAGCTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGCCCCAGTCTCCAGAACGTGTCCCACCATGCCTAGCTGAT  50

seq1  CCGGACACTCCTTCTTTTTAAATACTTACATTTTTATTTATTTTATGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGACACTCCTTCTTTTTAAATACTTACATTTTTATTTATTTTATGTGT  100

seq1  ATGAGTCTTTCACTTGCATGCATATATGTGCTTTACACTTGTGCCTGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTCTTTCACTTGCATGCATATATGTGCTTTACACTTGTGCCTGGTG  150

seq1  CTCAAGGACATTAGCAGAGGGTATTGGATCCTTTGGAACTGGAGTTACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGACATTAGCAGAGGGTATTGGATCCTTTGGAACTGGAGTTACTG  200

seq1  ATGATTTTAGCTGCCATGTGGGGGGTTGGAGATAAACCCAGGTCCTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTTAGCTGCCATGTGGGGGGTTGGAGATAAACCCAGGTCCTCTTT  250

seq1  AAGAGTAGCAAGTGCTTTTAACTACAGAGCCATTTTTCCAGACCCTAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTAGCAAGTGCTTTTAACTACAGAGCCATTTTTCCAGACCCTAGCT  300

seq1  TTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTGAGACAGGGTTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTGAGACAGGGTTTCTC  350

seq1  TGTGTAGCTCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGCTCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTC  400

seq1  GAGCTCAGAAATCCACCTGCCTCTGCCTTGGGAGCAAGTGTGCCACCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCAGAAATCCACCTGCCTCTGCCTTGGGAGCAAGTGTGCCACCACT  450

seq1  CCCCGGCTAGCTGGAACATTCTTAAGAATACCTCCGAGTGATTGTACTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGGCTAGCTGGAACATTCTTAAGAATACCTCCGAGTGATTGTACTCA  500

seq1  GAGGTGACATCTACTTGAGAAGAGATGTCAGCCAGCCAGGACTTCCTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGACATCTACTTGAGAAGAGATGTCAGCCAGCCAGGACTTCCTAGA  550

seq1  GGAAGGGACAGCAGATCTGTGAGTTGTAAATCCAATGTTGCAAGCTTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGACAGCAGATCTGTGAGTTGTAAATCCAATGTTGCAAGCTTGTG  600

seq1  CTTC-TTTGGTGCCTCCTCTTTATTAAAATGTGCACCCTGGCTGGCCAGA  649
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTTGGTGCCTCCTCTTTATTAAAATGTGCACCCTGGCTGGCCAGA  650

seq1  TGGCTCTGTAGGTGAAGAGGCCCTTGCTACTAAGTCTGACAACCTAATCT  699
      |||||||||||||||||||| || ||||||||||||||||||||||||||
seq2  TGGCTCTGTAGGTGAAGAGGTCCCTGCTACTAAGTCTGACAACCTAATCT  700

seq1  TGAACCCTGGCACCCATATGAC  721
      |||||||||||||| |||||||
seq2  TGAACCCTGGCACCTATATGAC  722

seq1: chrX_11538450_11538845
seq2: B6Ng01-027H10.g_69_464 (reverse)

seq1  GGGTCTATTCCACCCATGCACCCACCTCTACCCCATCTGCTTCCCTGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTATTCCACCCATGCACCCACCTCTACCCCATCTGCTTCCCTGTCT  50

seq1  GCGAGGAGAACAATGAGCTAAGACTTGTGTGTGTGCTCAGTGACCAGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGGAGAACAATGAGCTAAGACTTGTGTGTGTGCTCAGTGACCAGCTG  100

seq1  CCAGTCCTGCCTCTTGGGCAACACCATCTTGTTTTCTTTACCTTTCCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCCTGCCTCTTGGGCAACACCATCTTGTTTTCTTTACCTTTCCTGA  150

seq1  CCTTAGAGCACCGAGGCTGTAACCACATTGCTTGGTCAGGAAAGGGCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGAGCACCGAGGCTGTAACCACATTGCTTGGTCAGGAAAGGGCCAG  200

seq1  AGGTCTGGCAGGCTTGCAGGCCAGGGAGAGGCACACTCCCAGACACAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTGGCAGGCTTGCAGGCCAGGGAGAGGCACACTCCCAGACACAGAG  250

seq1  AAAGAAACTGGCAGCCTTCATCATCAATACCCAGTTCCCCTTTCTGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAACTGGCAGCCTTCATCATCAATACCCAGTTCCCCTTTCTGTGTG  300

seq1  TCATCTGGATTCTCCCAGCCTGGCACCCCCACAGCTCCCTGCAGAGATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGGATTCTCCCAGCCTGGCACCCCCACAGCTCCCTGCAGAGATCA  350

seq1  GCCAAGCAGTTAGCCTTCCCTGAAATATTAGGTGTGAAATGAATTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGCAGTTAGCCTTCCCTGAAATATTAGGTGTGAAATGAATTC  396