BAC Information

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BAC

Clone NameB6Ng01-028P01
ChromosomeX (Build37)
Map Location 123,609,374 - 123,610,036
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040410, LOC100039903, LOC665679, 4932411N23Rik, Gm381, LOC100040472, Gm382
Downstream gene4921511C20Rik, 4930412D23Rik, LOC385523
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028P01.bB6Ng01-028P01.g
ACCDH859279DH859280
length1,036956
definitionDH859279|Mus musculus domesticus DNA, BAC clone: B6Ng01-028P01, 5' end.DH859280|Mus musculus domesticus DNA, BAC clone: B6Ng01-028P01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatccctgacttttattatttcctgtagtctactcctcttgggtg
attttgcttcctttaattgtagaacttctatgtgtgcagtcagtctgcta
gtgtattcgctctctagtttatttttggaggcactctgggctatgaattt
tctacttaagactgccttcattgtgtcccataagtttgggtatgtagtgg
cttcattgtcattaaactctaaaaagtctttaatttctttctttatttca
tccttgaccaaggaatcattgagtagattgttgttcagtttccacgtaaa
tgttggctttctattatttatgttgttattgaagatgagccttagtccct
ggtgatcacataggatgcatgtgataagttcagtaattttgtatctgtcg
agttctgttttgtgaccaattatatggtcgattttggaagaggttccatg
tggcactgagaagaaagtttatccttttgttttaggataaaattttctgt
aaatatctgttaaatccatttgtttcctaacttctgttagtttcacagtg
tctctgtttagtttctgtttccaagatctgtccattggtgagagtggggt
gttgaagtctcccactattattatatgagttataatatgtgctttgagct
ttactaaagtttctctcataaatgtggctgcccttgtatttagagcatag
atattcagaattaagagttcatgttggtagattttacctttgatgagtat
gaagtgcccctccttgtcttttttgataaatttgggttgaaactcagttt
tatttgatataagaatggatactccagcttctttcttcagaccgtttgct
tggaaaatttttttccagcctttcactctgaggtagtgtctgtccttccc
ctgagtgtgttttctatagctagaaatgttgggtcctgtttgtgtagaca
ggctaatagtctatgtcttttaatggggatttagtcctttgatatagaga
attaaaggaaagtattggtcctcctgttctttttta
gaattcagtgacaaagtattatcttctgtatctatatggcatgattacaa
aatatggtattattattattattattattattatactaaatagatatttt
attaagacaattaagaaaatgaacaataaaatgatctgttattctttatc
tgaccttgaagctttttctttctttttttagttttatttatctatctatc
tatttatttatttatttatttatttatttatttatttatttatttatcta
cattccaaattttatttcccaccccttgtacacctacccactgttccaca
tcccaaacctcctccatacccctgtatccccaaggatgtcctgaccaacc
agatctcttaactccctgtggcctccagtctcttgagggataggtttatc
ttctctgactgaacccagacccagctgccctgtactgtatatgtgttaga
ggcctgatatcaactggtgtatgctgcctgatttgttgtcgagtgtttga
gaggtctcgggggttcagattaattggaactgctattccttctacagggt
caccttcctcttcagcttcttccagcctttaattcagccacaggggtcaa
cagcttctgtctggttggatgcatatacctccatctgacttttcagctgc
ttgttgggtcttctggagtgtggtcatgctaggtcaatttttgtgaacac
tccatagcctcaataataatgtcaggccttgggacctcccctttagcttg
atcctactttgagcctgtcactagaccatcctttcctctggcttttctcc
atttccatccctgcagctcgtcacacaagaaaaactatgggtcagagttt
tgactgtgggatggcaactcctctctccctggatgtcctgtcttcctgct
ggagtgggctccaaatgttccctatccttactctcctacatttcatctaa
gtccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_123609374_123610036
seq2: B6Ng01-028P01.g_66_728

seq1  GAATTCAGTGACAAAGTATTATCTTCTGTATCTATATGGCATGATTACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGACAAAGTATTATCTTCTGTATCTATATGGCATGATTACAA  50

seq1  AATATGGTATTATTATTATTATTATTATTATTATACTAAATAGATATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGGTATTATTATTATTATTATTATTATTATACTAAATAGATATTTT  100

seq1  ATTAAGACAATTAAGAAAATGAACAATAAAATGATCTGTTATTCTTTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGACAATTAAGAAAATGAACAATAAAATGATCTGTTATTCTTTATC  150

seq1  TGACCTTGAAGCTTTTTCTTTCTTTTTTTAGTTTTATTTATCTATCTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTGAAGCTTTTTCTTTCTTTTTTTAGTTTTATTTATCTATCTATC  200

seq1  TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATCTA  250

seq1  CATTCCAAATTTTATTTCCCACCCCTTGTACACCTACCCACTGTTCCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCAAATTTTATTTCCCACCCCTTGTACACCTACCCACTGTTCCACA  300

seq1  TCCCAAACCTCCTCCATACCCCTGTATCCCCAAGGATGTCCTGACCAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAACCTCCTCCATACCCCTGTATCCCCAAGGATGTCCTGACCAACC  350

seq1  AGATCTCTTAACTCCCTGTGGCCTCCAGTCTCTTGAGGGATAGGTTTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTCTTAACTCCCTGTGGCCTCCAGTCTCTTGAGGGATAGGTTTATC  400

seq1  TTCTCTGACTGAACCCAGACCCAGCTGCCCTGTACTGTATATGTGTTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGACTGAACCCAGACCCAGCTGCCCTGTACTGTATATGTGTTAGA  450

seq1  GGCCTGATATCAACTGGTGTATGCTGCCTGATTTGTTGTCGAGTGTTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGATATCAACTGGTGTATGCTGCCTGATTTGTTGTCGAGTGTTTGA  500

seq1  GAGGTCTCGGGGGTTCAGATTAATTGGAACTGCTATTCCTTCTACAGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTCGGGGGTTCAGATTAATTGGAACTGCTATTCCTTCTACAGGGT  550

seq1  CACCTTCCTCTTCAGCTTCTTCCAGCCTTTAATTCAGCCACAGGGGTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCCTCTTCAGCTTCTTCCAGCCTTTAATTCAGCCACAGGGGTCAA  600

seq1  CAGCTTCTGTCTGGTTGGATGCATATACCTCCATCTGACTTTTCAGCTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTCTGTCTGGTTGGATGCATATACCTCCATCTGACTTTTCAGCTGC  650

seq1  TTGTTGGGTCTTC  663
      |||||||||||||
seq2  TTGTTGGGTCTTC  663