MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-030H10
Chromosome	X (Build37)
Map Location	115,395,762 - 115,396,668
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC624284, LOC665066, EG624388, ENSMUSG00000072994
Downstream gene	LOC100039551, Tgifx1, LOC665087
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC624284 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:624284
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	LOC665066 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665066
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	EG624388 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624388 MGI:3648842
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	ENSMUSG00000072994 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100038680 MGI:3642203
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 7 ESTs, 1 Protein

name	LOC100039551 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039551
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 7 ESTs, 6 Proteins

name	Tgifx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245583 MGI:2387796
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665087 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665087
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 Proteins pseudo : _no_value

name	ENSMUSG00000072994 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272155 GeneID:100038680 MGI:3642203
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 7 ESTs, 1 Protein product : predicted gene, ENSMUSG00000072994 transcript_id : XM_001472879.1

name	LOC100039551 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272158 GeneID:100039551
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 7 ESTs, 6 Proteins product : similar to testis-expressed homeobox protein Tex1 transcript_id : XM_001472895.1

name	Tgifx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23346540 GeneID:245583 MGI:2387796
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TGIF homeobox 1 transcript_id : NM_153109.1

name	ENSMUSG00000072994 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272156 GeneID:100038680 MGI:3642203
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472929.1

name	LOC100039551 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272159 GeneID:100039551
definition	codon_start : 1 product : similar to testis-expressed homeobox protein Tex1 protein_id : XP_001472945.1

name	Tgifx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23346541 CCDS:CCDS30368.1 GeneID:245583 MGI:2387796
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : TGF beta-induced transcription factor 2-like protein; testis expressed homeobox Tex1 product : TGIF homeobox 1 protein_id : NP_694749.1

name	LOC624284 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624284
definition	number : 1 pseudo : _no_value

name	LOC624284 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624284
definition	number : 2 pseudo : _no_value

name	LOC624284 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624284
definition	number : 3 pseudo : _no_value

name	LOC665066 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665066
definition	number : 2 pseudo : _no_value

name	LOC665066 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665066
definition	number : 1 pseudo : _no_value

name	EG624388 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624388
definition	number : 1 pseudo : _no_value

name	LOC665087 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665087
definition	number : 2 pseudo : _no_value

name	LOC665087 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665087
definition	number : 1 pseudo : _no_value

clone name	MSMg01-168M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441M06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-292K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135D22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-365L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159H08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-161F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158E19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-367M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222O08
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-030H10.b	B6Ng01-030H10.g
ACC	DH860365	DH860366
length	995	1,122
definition	DH860365\|Mus musculus domesticus DNA, BAC clone: B6Ng01-030H10, 5' end.	DH860366\|Mus musculus domesticus DNA, BAC clone: B6Ng01-030H10, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctcatatcactgtggtgcatccattttatgctttataatttggtg ctcgtgtacagagaaattaagggtactttgaagtttgccttcaaagaata tcagagaaatagttaagtacatttatgtcctcagaaactaaaagtttcaa aataattgatgcaatagagataaacaggcatacagagatcaattttatac acttagtgaagaaattagctagtttctaaggagatttgtattgatagtca ttttgcatactctttttgtagtgaagagcttttgaaattaaagtagtcaa acaggcaaggagtacaggatgaatagcatacttatgagttgttaaaatat gaattaagaggtgaaaggaaatatgagatgtacttctaaattttgtctct ttgaaataaatagtgccaaggaccagcctcagcttggagaggggttctga gaaagggatgtttgagagtagcaaaacaaacaacttgaagtcacatcgtg ggtagcaaggtgacagcaatgttctgtttgagacaggtttcagattctct ctgtctctctctgtgtctctctgtctctgtaattttgtctctctgtctgt ctgtctctgtctctgtgtgtgtgagtgtgtgtattttctcgagacagatt tccagtcttttatttacatataaattcagttattaccccaggttcccttt tgattatcccatgaatcagcattctgtgaccccagcccgttcattattag aaagatacagcaagtacattttttaacatttcagaaatattcagagatct gcctaccttttgttaaatacaaacaaaaagttagctgggtggggaccccc cacacaccccacattaccatttctaccatgcctggtcctagacctaaatt ccctctgtcttaggctaacttgaacgaaggatatgatgtctttgtttctt tctgacagctgctcatagtacagtgcttctgtgtcaagtctgtga	gaattcagaacttttcagctggggaacgagagtaccagtgagtatagctt tacgaggtaagcctggccttgaactttctaaggaaattcaagacagtcta tcagaagtaaagtggaatatgtttggccttgaattttttctaatgttaga agcccttttgttccttttcacatgttatcaagtggttaaggcagggcgga ttctagatgaaattcaggacaagctatcagaagtaaagtggggagagaga gtaggaacaaagaggaaatatggtacacaaaataagtatacaggcctttc caagggtcttgaacccgaggaaaagttaaggttaggtaggaatacctgga gagagattagaagaaaaagaggaaaaagggaaaagaagaaagatcaatta gcggaggtctctaggaaaaggagcctgtgctcatcgctggatgggctcgg ggagccagctcttggtagctctgaatcagatgatgaattctcctctgaag aaacagactgggaggaagaagcagctcattatgagaaaaaagggtaccag ccaggtaaagtgctagctaatcagttaaggaagccaaaagcggctggcga aggccagtttgctgattggcctcagggcagtcggtttcaaggtccgccct atgcggagcccccgccctgcgtagtgcgtcagcaatgcgcagagagatgc gcagagaggcaatgcgcagagagatgcgcagagaggcagtgcgcagagag acaatgcgcagagaggcagtgcgcagactcattcattcccagagaggaac aaaggaaatacaacagcatttccggtctttgaaggagccgagggtgggcg tgtccacgctccggtagaaatacttacaaattaaagacttgccgagtcgg tccgtaatacggaacaatgctaattttacttggtgcagtagacaggctgc gcatggcactactctgcgactgcaacgttgtaagcgctctcctagtatgg gcaatatatggaatggagagtctttgcatgaactgcacagcgcagccgag acacgcagctgctttgacttgagcaaagaattgactttgactgttacggt caggaagctattctggttataa
quality values	Open. Hide. 38 20 22 33 61 61 61 38 43 61 61 47 33 35 61 61 61 61 61 47 55 61 55 55 47 43 12 10 22 28 35 29 25 14 14 36 59 61 61 61 61 61 61 59 55 55 59 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 52 55 55 43 52 59 59 59 61 61 61 61 59 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 59 52 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 55 59 61 61 59 59 61 61 61 61 61 61 61 61 59 61 61 52 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 59 59 61 61 61 61 61 59 59 61 59 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 55 55 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 49 61 61 55 55 61 61 61 61 61 55 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 53 61 53 61 53 61 61 61 53 50 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 52 53 57 45 57 57 57 57 53 57 57 57 53 57 57 57 53 57 57 57 57 57 53 53 52 57 53 57 57 53 53 57 57 57 57 57 50 57 50 57 53 57 47 57 57 42 53 57 38 57 53 57 45 45 50 57 57 53 53 53 53 26 57 52 53 45 38 42 41 31 57 57 52 47 37 50 57 53 53 57 57 45 38 35 25 38 30 53 37 52 45 41 27 57 53 47 53 52 34 45 45 57 39 33 38 41 42 57 57 53 37 52 53 45 57 28 57 52 45 57 57 57 41 40 23 29 33 39 45 57 45 30 43 52 43 38 40 50 50 16 37 24 20 57 52 50 48 42 50 42 40 57 57 57 30 42 50 57 46 28 19 18 30 24 40 53 33 15 34 44 22 34 57 52 29 32 23 28 37 33 40 53 31 31 37 25 24 42 32 32 57 57 57 57 53 37 29 30 30 31 57 53 29 25 30 53 57 33 29 29 30 30 37 29 9 46 31 33 17 37 36 29 15 26 30 30 31 40 13 57 57 24 37 20 47 33 46 32 25 30 30 22 51 40 29 31 51 51 51 39 32 30 38 30 28 29 30 45 44 26 23 10 46 51 9 30 14 51 51 51 51 43 25 29 28 27 21 26 48 51 12 12 23 27 33 31 29 29 28 29 33 51 39 29 20 19 22 33 29 29 38 22 34 33 27 18 17 41 31 29 28 16 26 11 29 11 9 33 15 23 31 14 41 35 25 32 28 33 15 24 6 25 29 22 9 8 27 12 31 28 32 25 27 34 33 29 25 35 18 11 12 38 8 12 12 12 39 14 36 14 28 29 43 29 15 6 5 6 14 8 51 39 30 23 28 36 15 46 20 29 27 29 30 51 26 14 16 35 17 16 16 22 21 23 51 11 20 28 9 20 9 29 28 32 27 17 33 29 14 25 28 23 28 12 19 25	Open. Hide. 61 61 52 49 61 49 12 14 24 13 23 28 61 55 59 30 23 34 59 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 59 59 59 61 55 59 59 59 61 59 61 59 55 61 52 43 43 24 37 28 36 37 45 59 61 61 61 61 61 61 59 61 59 61 61 61 59 61 61 61 61 61 61 59 61 59 61 61 59 61 61 61 59 59 59 59 61 61 59 61 61 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 59 59 59 61 61 61 61 61 61 61 61 59 59 61 61 61 59 61 59 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 59 61 61 61 61 59 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 61 59 59 59 61 61 61 61 61 59 61 61 59 59 61 61 61 61 61 59 59 59 61 59 59 59 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 55 61 61 52 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 61 52 61 55 55 61 61 61 61 55 55 61 61 61 55 61 61 61 61 47 61 61 61 61 61 61 61 55 61 61 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 53 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 39 61 53 61 61 52 53 61 53 53 61 61 61 61 61 61 61 61 61 61 61 42 61 61 61 61 53 47 61 61 61 61 61 47 53 47 61 47 47 47 61 61 47 61 61 53 61 61 61 53 61 61 52 61 61 61 50 57 53 47 53 53 53 53 57 31 27 53 47 53 43 53 57 57 45 53 53 52 43 53 53 53 50 57 45 53 53 47 53 53 47 52 52 53 40 43 53 50 42 53 34 53 53 53 43 40 40 29 52 52 50 50 52 53 57 45 53 57 53 36 45 53 43 12 34 20 46 45 37 53 53 47 57 38 53 53 50 50 38 36 35 24 57 52 53 40 53 47 26 30 42 16 36 50 38 53 37 46 52 41 28 41 47 57 12 53 57 35 50 57 53 31 39 38 53 50 45 50 53 28 33 57 57 57 57 35 30 57 41 45 38 40 37 40 42 42 33 38 29 38 33 40 38 30 50 29 39 37 53 30 31 50 53 42 43 38 53 46 31 31 36 38 30 53 52 41 46 38 53 42 42 34 36 35 37 53 27 18 53 36 31 53 52 52 40 40 32 33 37 29 42 40 30 53 30 52 27 41 28 41 33 37 37 33 36 37 40 17 53 24 41 27 24 27 25 18 29 53 24 25 37 37 21 40 20 40 23 46 28 37 25 20 33 28 24 30 24 14 32 21 39 44 13 9 39 33 19 18 30 34 51 32 20 13 38 23 31 31 28 25 27 28 29 28 21 12 23 43 47 30 11 21 35 31 29 37 6 9 9 23 33 38 31 22 32 25 46 18 29 39 48 31 29 38 35 18 14 19 24 29 41 21 39 23 51 36 21 34 51 36 24 23 20 22 16 41 28 13 35 22 41 31 28 29 29 30 18 31 19 16 51 9 26 19 18 18 9 7 8 4 36 30 32 7 9 51 34 20 51 9 10 29 29 19 24 11 29 19 20 34 31 43 19 41 39 28 25 34 33 11 10 18 14 22 31 13 40 7 17 20 31 23 28 27 17 28 51 46 29 15 39 22 13 21 25 5 19 23 28 15 38 28 19 14 16 17 28 29 7 31 30 7 6 5 5 23 19 28 12 23 33 20 36 27 20 35 8 21 35 6 25 17 8 29 14 24 23 6 11 11 9 34 8 33 22 7 30 11 14 11 8 7 6 29 6 21 14 10 5 4 12 36 27 17 17 20 16 5 5 10 11 29 20 19 31 16 30 24 25 9 20 5 7 9 14 34 9 31 5 4 6 6 17 21 10 13 30 12 6 7 19 14 4 3 6 9 21 9 24 8 5 5 4 6 7 3 4 10 5 4 9 13 6 6 11 32 19 7 7 4 2 2 1 12 5 5 14 10 12 7 7 11 19 8 18 7 5 23 32 24 16 19 7 7 5 12 12 5 8 11 21 10 7 3 17 18 7 4 5 10 18 4 11 7 3 6 5 7 3 6 5 3 3 3

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_115395762_115396668
seq2: B6Ng01-030H10.b_46_955

seq1  GAATTCTCATATCACTGTGGTGCATCCATTTTATGCTTTATAATTTGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATATCACTGTGGTGCATCCATTTTATGCTTTATAATTTGGTG  50

seq1  CTCGTGTACAGAGAAATTAAGGGTACTTTGAAGTTTGCCTTCAAAGAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTGTACAGAGAAATTAAGGGTACTTTGAAGTTTGCCTTCAAAGAATA  100

seq1  TCAGAGAAATAGTTAAGTACATTTATGTCCTCAGAAACTAAAAGTTTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAAATAGTTAAGTACATTTATGTCCTCAGAAACTAAAAGTTTCAA  150

seq1  AATAATTGATGCAATAGAGATAAACAGGCATACAGAGATCAATTTTATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTGATGCAATAGAGATAAACAGGCATACAGAGATCAATTTTATAC  200

seq1  ACTTAGTGAAGAAATTAGCTAGTTTCTAAGGAGATTTGTATTGATAGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTGAAGAAATTAGCTAGTTTCTAAGGAGATTTGTATTGATAGTCA  250

seq1  TTTTGCATACTCTTTTTGTAGTGAAGAGCTTTTGAAATTAAAGTAGTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCATACTCTTTTTGTAGTGAAGAGCTTTTGAAATTAAAGTAGTCAA  300

seq1  ACAGGCAAGGAGTACAGGATGAATAGCATACTTATGAGTTGTTAAAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAAGGAGTACAGGATGAATAGCATACTTATGAGTTGTTAAAATAT  350

seq1  GAATTAAGAGGTGAAAGGAAATATGAGATGTACTTCTAAATTTTGTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAAGAGGTGAAAGGAAATATGAGATGTACTTCTAAATTTTGTCTCT  400

seq1  TTGAAATAAATAGTGCCAAGGACCAGCCTCAGCTTGGAGAGGGGTTCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATAAATAGTGCCAAGGACCAGCCTCAGCTTGGAGAGGGGTTCTGA  450

seq1  GAAAGGGATGTTTGAGAGTAGCAAAACAAACAACTTGAAGTCACATCGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGATGTTTGAGAGTAGCAAAACAAACAACTTGAAGTCACATCGTG  500

seq1  GGTAGCAAGGTGACAGCAATGTTCTGTTTGAGACAGGTTTCAGATTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCAAGGTGACAGCAATGTTCTGTTTGAGACAGGTTTCAGATTCTCT  550

seq1  CTGTCTCTCTCTGTGTCTCTCTGTCTCTGTAATTTTGTCTCTCTGTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTCTCTGTGTCTCTCTGTCTCTGTAATTTTGTCTCTCTGTCTGT  600

seq1  CTGTCTCTGTCTCTGTGTGTGTGAGTGTGTGTATTTTCTCGAGACAGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTGTCTCTGTGTGTGTGAGTGTGTGTATTTTCTCGAGACAGATT  650

seq1  TCCAGTCTTTTATTTACATATAAATTCAGTTATTACCCCAGGTTCCCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTCTTTTATTTACATATAAATTCAGTTATTACCCCAGGTTCCCTTT  700

seq1  TGATTATCCCATGAATCAGCATTCTGTGACCCCAGCCCGTTCATTATTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATCCCATGAATCAGCATTCTGTGACCCCAGCCCGTTCATTATTAG  750

seq1  AAAGATACAGCAAGTACATTTTTTAACATTTCAGAAATATTCAGAGATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATACAGCAAGTACATTTTTTAACATTTCAGAAATATTCAGAGATCT  800

seq1  GCCTACC-TTTGTTAAATACAAACAAAAAGTTAGCTGGGT-GGGACCCCC  848
      ||||||| |||||||||||||||||||||||||||||||| |||||||||
seq2  GCCTACCTTTTGTTAAATACAAACAAAAAGTTAGCTGGGTGGGGACCCCC  850

seq1  CACACA-CCCACATTACCATTTCTACCATGCCTGGTCCTAGACCTAAATT  897
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACCCCACATTACCATTTCTACCATGCCTGGTCCTAGACCTAAATT  900

seq1  CCCTCTGTCT  907
      ||||||||||
seq2  CCCTCTGTCT  910

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