BAC Information

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BAC

Clone NameB6Ng01-031G07
ChromosomeX (Build37)
Map Location 158,241,081 - 158,375,262
singlet/doubletdoublet
Overlap geneGm47, Nhs
Upstream geneGja6, Scml2, LOC414364, Prkaca-ps1, Rai2
Downstream geneReps2, LOC654358, LOC100041557, LOC667630, Rbbp7, 4932441K18Rik, LOC671250, Syap1, LOC100041607, Ctps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031G07.bB6Ng01-031G07.g
ACCDH861019DH861020
length1,1601,032
definitionDH861019|Mus musculus domesticus DNA, BAC clone: B6Ng01-031G07, 5' end.DH861020|Mus musculus domesticus DNA, BAC clone: B6Ng01-031G07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(158,374,077 - 158,375,262)(158,241,081 - 158,242,121)
sequence
gaattcatagtggaggtctgccgatgtactgctctagaagcttcttgctt
cccaaattttatttcttgaagattagagagacctatacctgggacataaa
actagagaacagtggctatcaaagcattgacaggcaggtcccaatgttct
actaaacattccttcatcagttatctaaatcctaacatgtgctgggaagg
cctgcttggggaggaattgctgagtgccttaagagaagaaatgggtctgt
cagttatggagacacagtgaccctgaagcagtgtcccttcctccagaaga
ggcaggttctagacctctgaacaaatttacgttctgcaactttgaaaaag
atgctctttcactcaaggctgggtatgtacacaagtcattgttccaagac
agcctccatcaatcacttcccagggaagaaatgaaattataatatctagg
caatcataaccggagctggactgcgattgcactacatagtgaacagggcc
cagaggaaggcgatgctgaaaaccagatggccaagcattttcaattctgc
acccatgggtgctttgagaggtcaagtagtaccatgagaggcaatgtgta
ttgctagagcaaagtgggagtttctcagtggcttcttttatgcttcctga
caagcattgctgttggccctccaggcaaggaagagaccattaaaatggag
aagaaacagccactccatcaccaatatcatgctatcctcttcaccttatt
acatggcctgcttacatttcaaaaccttccctgtggtggagtcttgctgg
aatatgaagcctgggctttctttgttttgttttgtttttgcttttcttct
ttcatgtgcacaggtttttgttcatctgtggaggagggagagctgtggct
aagctagaagttgaagcatagttttgattaagtcaggctaggatactgaa
tcttctgactggtattcacaatctcccagagatgctgtaacgtctgcatt
cagatatgagtcccgattatagaagagtaagtatagacttgctggaagcc
aattgtgactcctgacctgcaaactgtccactacctatccatgttctaga
aatgaatgccatctcaatgcttcctccatcggtcctgtattcttggagtg
cctgaggatt
gaattcatgaagttcttaggcaaatgaatggaactagaaactatcatcct
gagtgaggtaacccagtcacaaaagaacacatatggtatgcactcctaaa
gctttctaattaagattgatagaccctttctggagagccttataaataag
aggggtaaaacatttattttggggggagccattttctgaatgaaggattt
tccaggtgcagatctttccccaatgtttccactcaaagttgggactccaa
tagcaaaggatccagttttcgggttcttcccactttgagagatctggttt
cagttttgtttgtatgaatggccagccaactgtatgagtgattgaaagca
tattgaacaagtttggcccaggtgctatttaattgagttttttttttaaa
ttgctattggtgtttctattttgtcttttctgtcaccccttttcttttgt
tggtcctgagaagaagggagctgggatgctccccgaattcactctgattt
aatgagaaaactctccaaggggtttctgaaagcttctccatcttccccca
cttggcagcaccctttgtatgcctttgtttacttggtctttttgtctgaa
aactcccctaattttcccctttccccttcagtcatattaaactgctcctg
gaattgccccctggactaggcttcttacttgctcccacaacatggggcct
ctagcaagtcttgcatgtgtttgtcttctctttattgcttctgggttggt
cctgtgaaaatttctacttcactcatttactttaattttctgctacatgg
ggagtctatctaaactctcacccctttgaagtatcctaaagaatttctcc
caagtatttgggggaagaccataagggttaactgtcaagagaaagcacca
tactttttgtgatattgactggcctcctatgaagtgagatgccattgatc
agtccatagacccagcaatgtgaatcagtctgactcaggtcacatgatcc
ctagtgtaccatggtctgattgatcatgtttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_158374077_158375262
seq2: B6Ng01-031G07.b_42_1201 (reverse)

seq1  AATCCTCAAAGCATACCAAGAATACAGGAGACAGATGGAGAGGCAAGCAT  50
      ||||||| | |||  ||||||||||||  ||| ||||||   | ||||| 
seq2  AATCCTC-AGGCACTCCAAGAATACAG--GACCGATGGA---GGAAGCA-  43

seq1  TTGAGATGAGCATATCCATGTCTAGGAAACATGAATATGATAGTGGAACA  100
      |||||||| ||  || ||| |||||  |||||| ||| | |||||| |||
seq2  TTGAGATG-GC--ATTCATTTCTAG--AACATGGATA-GGTAGTGG-ACA  86

seq1  GTTTTGCA-GTCAGGAAGTCACAATTTGCCTTCCCTACCAGTTCTAATAC  149
      | |||||| |||||| |||||||| ||| |||||  | ||  ||| ||||
seq2  G-TTTGCAGGTCAGG-AGTCACAA-TTGGCTTCC--AGCAAGTCT-ATAC  130

seq1  TCTACTCTTCTATTAATCGGGACTCATATCTGAATGCAGACGTTTACAGC  199
      | |||||||||| ||||||||||||||||||||||||||||| |||||| 
seq2  T-TACTCTTCTA-TAATCGGGACTCATATCTGAATGCAGACG-TTACAG-  176

seq1  CATCTCTGGGGAGATTGTGAATACCAGTCAGAAGATTCAGTATCCTAGCC  249
      ||||||| |||||||||||||||||||||||||||||||||||||||| |
seq2  CATCTCT-GGGAGATTGTGAATACCAGTCAGAAGATTCAGTATCCTAG-C  224

seq1  CTGACCTTAATCAAAACTATGCTTCAACTTCTAGCTTAGCCACAGCTCTC  299
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGA-CTTAATCAAAACTATGCTTCAACTTCTAGCTTAGCCACAGCTCTC  273

seq1  CCTCCTCCACAGATGAACAAAAACCTGTGCACATGAAAGAAGAAAAGCAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCACAGATGAACAAAAACCTGTGCACATGAAAGAAGAAAAGCAA  323

seq1  AAACAAAACAAAACAAAGAAAGCCCAGGCTTCATATTCCAGCAAGACTCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACAAAACAAAGAAAGCCCAGGCTTCATATTCCAGCAAGACTCC  373

seq1  ACCACAGGGAAGGTTTTGAAATGTAAGCAGGCCATGTAATAAGGTGAAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGGGAAGGTTTTGAAATGTAAGCAGGCCATGTAATAAGGTGAAGA  423

seq1  GGATAGCATGATATTGGTGATGGAGTGGCTGTTTCTTCTCCATTTTAATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGCATGATATTGGTGATGGAGTGGCTGTTTCTTCTCCATTTTAATG  473

seq1  GTCTCTTCCTTGCCTGGAGGGCCAACAGCAATGCTTGTCAGGAAGCATAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTCCTTGCCTGGAGGGCCAACAGCAATGCTTGTCAGGAAGCATAA  523

seq1  AAGAAGCCACTGAGAAACTCCCACTTTGCTCTAGCAATACACATTGCCTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCCACTGAGAAACTCCCACTTTGCTCTAGCAATACACATTGCCTC  573

seq1  TCATGGTACTACTTGACCTCTCAAAGCACCCATGGGTGCAGAATTGAAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTACTACTTGACCTCTCAAAGCACCCATGGGTGCAGAATTGAAAA  623

seq1  TGCTTGGCCATCTGGTTTTCAGCATCGCCTTCCTCTGGGCCCTGTTCACT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGCCATCTGGTTTTCAGCATCGCCTTCCTCTGGGCCCTGTTCACT  673

seq1  ATGTAGTGCAATCGCAGTCCAGCTCCGGTTATGATTGCCTAGATATTATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGTGCAATCGCAGTCCAGCTCCGGTTATGATTGCCTAGATATTATA  723

seq1  ATTTCATTTCTTCCCTGGGAAGTGATTGATGGAGGCTGTCTTGGAACAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTTCTTCCCTGGGAAGTGATTGATGGAGGCTGTCTTGGAACAAT  773

seq1  GACTTGTGTACATACCCAGCCTTGAGTGAAAGAGCATCTTTTTCAAAGTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGTGTACATACCCAGCCTTGAGTGAAAGAGCATCTTTTTCAAAGTT  823

seq1  GCAGAACGTAAATTTGTTCAGAGGTCTAGAACCTGCCTCTTCTGGAGGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAACGTAAATTTGTTCAGAGGTCTAGAACCTGCCTCTTCTGGAGGAA  873

seq1  GGGACACTGCTTCAGGGTCACTGTGTCTCCATAACTGACAGACCCATTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACTGCTTCAGGGTCACTGTGTCTCCATAACTGACAGACCCATTTC  923

seq1  TTCTCTTAAGGCACTCAGCAATTCCTCCCCAAGCAGGCCTTCCCAGCACA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTAAGGCACTCAGCAATTCCTCCCCAAGCAGGCCTTCCCAGCACA  973

seq1  TGTTAGGATTTAGATAACTGATGAAGGAATGTTTAGTAGAACATTGGGAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGGATTTAGATAACTGATGAAGGAATGTTTAGTAGAACATTGGGAC  1023

seq1  CTGCCTGTCAATGCTTTGATAGCCACTGTTCTCTAGTTTTATGTCCCAGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGTCAATGCTTTGATAGCCACTGTTCTCTAGTTTTATGTCCCAGG  1073

seq1  TATAGGTCTCTCTAATCTTCAAGAAATAAAATTTGGGAAGCAAGAAGCTT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGTCTCTCTAATCTTCAAGAAATAAAATTTGGGAAGCAAGAAGCTT  1123

seq1  CTAGAGCAGTACATCGGCAGACCTCCACTATGAATTC  1186
      |||||||||||||||||||||||||||||||||||||
seq2  CTAGAGCAGTACATCGGCAGACCTCCACTATGAATTC  1160

seq1: chrX_158241081_158242121
seq2: B6Ng01-031G07.g_68_1099

seq1  GAATTCATGAAGTTCTTAGGCAAATGAATGGAACTAGAAACTATCATCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAAGTTCTTAGGCAAATGAATGGAACTAGAAACTATCATCCT  50

seq1  GAGTGAGGTAACCCAGTCACAAAAGAACACATATGGTATGCACTCCTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGGTAACCCAGTCACAAAAGAACACATATGGTATGCACTCCTAAA  100

seq1  GCTTTCTAATTAAGATTGATAGACCCTTTCTGGAGAGCCTTATAAATAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTAATTAAGATTGATAGACCCTTTCTGGAGAGCCTTATAAATAAG  150

seq1  AGGGGTAAAACATTTATTTTGGGGGGAGCCATTTTCTGAATGAAGGATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTAAAACATTTATTTTGGGGGGAGCCATTTTCTGAATGAAGGATTT  200

seq1  TCCAGGTGCAGATCTTTCCCCAATGTTTCCACTCAAAGTTGGGACTCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTGCAGATCTTTCCCCAATGTTTCCACTCAAAGTTGGGACTCCAA  250

seq1  TAGCAAAGGATCCAGTTTTCGGGTTCTTCCCACTTTGAGAGATCTGGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAAGGATCCAGTTTTCGGGTTCTTCCCACTTTGAGAGATCTGGTTT  300

seq1  CAGTTTTGTTTGTATGAATGGCCAGCCAACTGTATGAGTGATTGAAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTGTTTGTATGAATGGCCAGCCAACTGTATGAGTGATTGAAAGCA  350

seq1  TATTGAACAAGTTTGGCCCAGGTGCTATTTAATTGAGTTTTTTTTTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAACAAGTTTGGCCCAGGTGCTATTTAATTGAGTTTTTTTTTTAAA  400

seq1  TTGCTATTGGTGTTTCTATTTTGTCTTTTCTGTCACCCCTTTTCTTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATTGGTGTTTCTATTTTGTCTTTTCTGTCACCCCTTTTCTTTTGT  450

seq1  TGGTCCTGAGAAGAAGGGAGCTGGGATGCTCCCCGAATTCACTCTGATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTGAGAAGAAGGGAGCTGGGATGCTCCCCGAATTCACTCTGATTT  500

seq1  AATGAGAAAACTCTCCAAGGGGTTTCTGAAAGCTTCTCCATCTTCCCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGAAAACTCTCCAAGGGGTTTCTGAAAGCTTCTCCATCTTCCCCCA  550

seq1  CTTGGCAGCACCCTTTGTATGCCTTTGTTTACTTGGTCTTTTTGTCTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCAGCACCCTTTGTATGCCTTTGTTTACTTGGTCTTTTTGTCTGAA  600

seq1  AACTCCCCTAATTTTCCCCTTTCCCCTTCAGTCATATTAAACTGCTCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCCCTAATTTTCCCCTTTCCCCTTCAGTCATATTAAACTGCTCCTG  650

seq1  GAATTGCCCCCTGGACTAGGCTTCTTACTTGCTCCCACAACATGGGGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGCCCCCTGGACTAGGCTTCTTACTTGCTCCCACAACATGGGGCCT  700

seq1  CTAGCAAGTCTTGCATGTGTTTGTCTTCTCTTTATTGCTTCTGGGTTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAAGTCTTGCATGTGTTTGTCTTCTCTTTATTGCTTCTGGGTTGGT  750

seq1  CCTGTGAAAATTTCTACTTCACTCATTTACTTAAATTTTCTGCTAACATG  800
      |||||||||||||||||||||||||||||||| ||||||||||| |||||
seq2  CCTGTGAAAATTTCTACTTCACTCATTTACTTTAATTTTCTGCT-ACATG  799

seq1  GGGAGTCTATCTAAACTCTCACCCCTTTGAAGTATCCTAAAGAATTTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTCTATCTAAACTCTCACCCCTTTGAAGTATCCTAAAGAATTTCTC  849

seq1  CCAAGTATTTGGGGGAAGACCATAAGGGTTAACTGTCAAGAGAAAAGCAC  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CCAAGTATTTGGGGGAAGACCATAAGGGTTAACTGTCAAGAG-AAAGCAC  898

seq1  CATACTTTTTGTGATATTGACTGGCCTTCCTATGAAGTGAGATGGCCATT  950
      |||||||||||||||||||||||||| |||||||||||||||| ||||||
seq2  CATACTTTTTGTGATATTGACTGGCC-TCCTATGAAGTGAGAT-GCCATT  946

seq1  GATCAGTCCATAGACCCAGCCATTGTGAAATCAGTCTGACTCAAGGTCAC  1000
      ||||||||||||||||||| || |||| |||||||||||||| |||||||
seq2  GATCAGTCCATAGACCCAG-CAATGTG-AATCAGTCTGACTC-AGGTCAC  993

seq1  AGGATCCCTAGGGTACCATGGTCTGTATTGATCAATGTTTG  1041
      | ||||||||| ||||||||||||| ||||||| |||||||
seq2  ATGATCCCTAGTGTACCATGGTCTG-ATTGATC-ATGTTTG  1032