BAC Information

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BAC

Clone NameB6Ng01-031J04
ChromosomeX (Build37)
Map Location 55,918,098 - 55,919,130
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666441, LOC666447, Zic3, LOC631581
Downstream geneLOC631621, 4930550L24Rik, Fgf13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031J04.bB6Ng01-031J04.g
ACCDH861148DH861149
length1,0001,135
definitionDH861148|Mus musculus domesticus DNA, BAC clone: B6Ng01-031J04, 5' end.DH861149|Mus musculus domesticus DNA, BAC clone: B6Ng01-031J04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaactccttggaactgctaaccaaactaaactctttcttctgta
agttaccttggtcatagtgttttatcatagcatcagaaaagtaacaaata
gaaccactaatatgaatcacatttgccaggcctttataattcaaatatat
gattagtcttacatatatttgttttttcttaaaattcaaatgccagtaaa
catttgataatttttagtaatcatagagattctgtcaccaaggtattata
aactcatcagaagagaataatgaaaagcaggtctccatcatgccctctta
taacagatcttattatcttgttacttatatgagctcagattctccatgtt
gtttttgctcttatacacaacaggcattctgagctttccattctccatgg
tgttttgaattctaaaaaaaaaaaaaaaaaaaaaaaattaaaaaaataaa
gcaagttcatctggaaagggcatgggtaaaatgtacatttggaaagccca
agtgagtttcaaccttggactctattacgctgcataaagcaaagcaaaag
ttcagggtgaaattaggacttgaggcagagatgagctattagtcttgtct
cacacagatgaggcctggacagtctccagttccccagctaattaggtagc
cctactgccctgtggaggtttgcagtgctgcatactgttattaatataag
taaagctcccatcttgactgtgaaatcactaaaaattatacctaagttcc
attttagccttttttgcccatccatctctatcaaagtttattcctcagac
acattaataagaaaatcctataaatgaagggatttaatttcccagtctgc
actagatgctttcctgatcataggcctttacaagagtagagaaacaaact
atacgcatctgagtctgcacagtagctgatgggagctatactcataatag
actcagagcaagcattacttcttgagatctcagcccaccctcatgatgag

gaattctcacctgaggaataccgaatggcagagaagcaccggaaaaaatg
ttcaacatccttcatcatcagggaaatgcaaatcaaaacaaccctgatat
tccacttcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatacccagaagatgccccaagtggtaagaaggacacatgttccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaacatgtggtacatctacacaatg
gagtactactgagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcttgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatacaagatacaatttgataaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacaaagacaaagtttggagctaagatga
aaggatggaccatgtagagactaccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
actgaagtggatgctcacagtcagctatgatggatcacaggctcccaatg
agagctagagaagtacccagagctaaaggatctgcaatctatagtgacac
attatgactatccagtaccggatttcttgactctagctgcatatgtatca
aagatgctagtcgccatcactgaaagaagagcatgactgtacttatgcca
gatcagggaacacaggtcaagagattggttgctcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_55918098_55919130
seq2: B6Ng01-031J04.b_44_1043

seq1  GAATTCTAACTCCTTGGAACTGCTAACCAAACTAAACTCTTTCTTCTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACTCCTTGGAACTGCTAACCAAACTAAACTCTTTCTTCTGTA  50

seq1  AGTTACCTTGGTCATAGTGTTTTATCATAGCATCAGAAAAGTAACAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACCTTGGTCATAGTGTTTTATCATAGCATCAGAAAAGTAACAAATA  100

seq1  GAACCACTAATATGAATCACATTTGCCAGGCCTTTATAATTCAAATATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCACTAATATGAATCACATTTGCCAGGCCTTTATAATTCAAATATAT  150

seq1  GATTAGTCTTACATATATTTGTTTTTTCTTAAAATTCAAATGCCAGTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGTCTTACATATATTTGTTTTTTCTTAAAATTCAAATGCCAGTAAA  200

seq1  CATTTGATAATTTTTAGTAATCATAGAGATTCTGTCACCAAGGTATTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGATAATTTTTAGTAATCATAGAGATTCTGTCACCAAGGTATTATA  250

seq1  AACTCATCAGAAGAGAATAATGAAAAGCAGGTCTCCATCATGCCCTCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATCAGAAGAGAATAATGAAAAGCAGGTCTCCATCATGCCCTCTTA  300

seq1  TAACAGATCTTATTATCTTGTTACTTATATGAGCTCAGATTCTCCATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGATCTTATTATCTTGTTACTTATATGAGCTCAGATTCTCCATGTT  350

seq1  GTTTTTGCTCTTATACACAACAGGCATTCTGAGCTTTCCATTCTCCATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGCTCTTATACACAACAGGCATTCTGAGCTTTCCATTCTCCATGG  400

seq1  TGTTTTGAATTCTAAAAAAAAAAAAAAAAAAAAAAAATTAAAAAAATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGAATTCTAAAAAAAAAAAAAAAAAAAAAAAATTAAAAAAATAAA  450

seq1  GCAAGTTCATCTGGAAAGGGCATGGGTAAAATGTACATTTGGAAAGCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTCATCTGGAAAGGGCATGGGTAAAATGTACATTTGGAAAGCCCA  500

seq1  AGTGAGTTTCAACCTTGGACTCTATTACGCTGCATAAAGCAAAGCAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTTTCAACCTTGGACTCTATTACGCTGCATAAAGCAAAGCAAAAG  550

seq1  TTCAGGGTGAAATTAGGACTTGAGGCAGAGATGAGCTATTAGTCTTGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGGTGAAATTAGGACTTGAGGCAGAGATGAGCTATTAGTCTTGTCT  600

seq1  CACACAGATGAGGCCTGGACAGTCTCCAGTTCCCCAGCTAATTAGGTAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGATGAGGCCTGGACAGTCTCCAGTTCCCCAGCTAATTAGGTAGC  650

seq1  CCTACTGCCCTGTGGAGGTTTGCAGTGCTGCATACTGTTATTAATATAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTGCCCTGTGGAGGTTTGCAGTGCTGCATACTGTTATTAATATAAG  700

seq1  TAAAGCTCCCATCTTGACTGTGAAATCACTAAAAATTATACCTAAGTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTCCCATCTTGACTGTGAAATCACTAAAAATTATACCTAAGTTCC  750

seq1  ATTTTAGCCTTTTTTGCCCATCCATCTCTATCAAAGTTTATTCCTCAAGA  800
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATTTTAGCCTTTTTTGCCCATCCATCTCTATCAAAGTTTATTCCTC-AGA  799

seq1  CACATTAATAAGAAAATCCTATAAATGAAAGGGATTTAAATTTCCCAGTC  850
      ||||||||||||||||||||||||||| ||||||||| ||||||||||||
seq2  CACATTAATAAGAAAATCCTATAAATG-AAGGGATTT-AATTTCCCAGTC  847

seq1  TGCACTAAGATGCTTTCCTGATCAATAAGGGCCTTTTACAAAGAAGTTAG  900
      |||||| |||||||||||||||| |||  |||| ||||| ||||   |||
seq2  TGCACT-AGATGCTTTCCTGATC-ATA--GGCC-TTTAC-AAGA--GTAG  889

seq1  AGAAACAAAACTATACGGCATTCTGAGTCTGCACCAAGGTAGCTTGATGG  950
      |||||| ||||||||| ||| |||||||||||||    ||||| |||| |
seq2  AGAAAC-AAACTATAC-GCA-TCTGAGTCTGCAC---AGTAGC-TGAT-G  931

seq1  GGAGCTATACTCATATATAAGACTCCAAGAAGGCAGGGCATTTACTATCT  1000
      ||||||||||||||| || ||||||  || | |||      ||||| || 
seq2  GGAGCTATACTCATA-AT-AGACTCAGAGCAAGCA------TTACT-TC-  971

seq1  TTGAGATCTCAGCCCCCACCCCTCATGAATGAG  1033
      |||||||||||||||    |||||||| |||||
seq2  TTGAGATCTCAGCCC---ACCCTCATG-ATGAG  1000