BAC Information

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BAC

Clone NameB6Ng01-032C13
ChromosomeX (Build37)14 (Build37)
Map Location 102,074,324 - 102,074,496110,449,173 - 110,450,179
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG668426, LOC668430, Rnf12, C77370, Vcp-ps, EG621542, Uprt, Zdhhc15, Magee2
Downstream geneLOC622098, LOC676331, 5530601H04Rik, 2610029G23Rik, Magee1, LOC622159, LOC668454, E530001F21Rik, LOC622202, LOC100043213, LOC668458, Cypt2, EG633570, Fgf16, Atrx
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032C13.bB6Ng01-032C13.g
ACCDH861575DH861576
length406998
definitionDH861575|Mus musculus domesticus DNA, BAC clone: B6Ng01-032C13, 5' end.DH861576|Mus musculus domesticus DNA, BAC clone: B6Ng01-032C13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(102,074,324 - 102,074,496)(110,449,173 - 110,450,179)
sequence
gaattcaatgggatcttcggaggttcctccttgtcataatgttgctttag
gaatctttatctcatttttaaatttatttttaattgttgtatacattgtt
cttctttatttttctataggtactttggacatatataattactcccaact
ttgtgctttatgggtaagttgagtgtatgaacaagtgggtcactggtact
cctgccttctcttgggttattttttacttcttttttttttccatttttta
ttaggtatttagctcatttacatttccaatgctataccaaaagtccccca
tacccacccacccccactcccctacccacccactcccccttttgggccct
ggcgttcccctgtactggagcatataaagtttgcatgtccaatgggcctc
tctttc
gaattccaagtcgaatcaaattagtagcttgaggaaaataatatcaaaat
atagaatatacatgtataaacacatagaaacttacatacatatgtaatta
tatattcatatttactcatatgcatattatacatatgtaatattatttta
atatattatgtctaatctttatttaacatcaaacaggatttaaagtaata
tccctggacatggattttattcaatttgtagttcacatcattaaaaaacc
aaatttttaatagaaaaatattaagaaagtaataatggcctctcctccca
tcgatggccgactaggccatcttctgatacatatgcagctagagacacag
ctctgggggttactggttagttaatattgttgttcctcctatagggttgc
agaccccttcagctccttgggtactttctctagctccttcattagggccc
ctgtttttcatccaatagatgactgtgagcatccacttctgtatttgcca
ggcattgtcatagcctcacaagaaagagctatgtcagggtcctgtcagca
aaatctttctggcatagggagcagggcagggaaagggtataggggacttt
ggggatagcatttgaaatataaatgaagaaaatgtctaataaaaatgcct
ttaaaaagtaataatgaaaaattttagtatcatttgataaaattatttga
gaattactaccatatttcagtttaggtatgggttttattagctgccaaag
aaaataagaagaataaatcttaaccactttgttggctttatttaagagtc
attaactagataaaattacttctcacttactgtcttactcctgcatggaa
ttttttactctgttttgcattttaactttggaataaatggaactatacaa
gatctactgtggggaagttgttttggcatgttattctggagggaaataga
gaacagactctgggtttgagaaagaaacccaattccctcatcaaagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_102074324_102074496
seq2: B6Ng01-032C13.b_267_440 (reverse)

seq1  GAAAGAGAGGCCCATTGGACAAGCAAACTTTATATGCCCCAGTA-TGGGG  49
      ||||||||||||||||||||| ||||||||||||||| ||||||  ||||
seq2  GAAAGAGAGGCCCATTGGACATGCAAACTTTATATGCTCCAGTACAGGGG  50

seq1  AGCACCAGGGCCAAAAAGAGGGAGTGAGTGGGTAGGGGATTGGGGGTGGG  99
      | | |||||||| ||||| ||||||| |||||||||||| ||||||||||
seq2  AACGCCAGGGCCCAAAAGGGGGAGTGGGTGGGTAGGGGAGTGGGGGTGGG  100

seq1  TGGGTATGGGGGACTTTTGGCATAGCATTGGAAATGTAAATGAGCTAAAC  149
      |||||||||||||||||||| |||||||||||||||||||||||||||| 
seq2  TGGGTATGGGGGACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAAAT  150

seq1  ACCTAATAAAAAATAGAAAAAAAA  173
      |||||||||||||| |||||||||
seq2  ACCTAATAAAAAATGGAAAAAAAA  174

seq1: chr14_110449173_110450179
seq2: B6Ng01-032C13.g_71_1067 (reverse)

seq1  ACTTTGATGATGGAAGTTTGCTTTTCTTTTCTCCAAACCAGAGTTTGTTA  50
      |||||||||| ||||  |||  |||| |||||| || ||||||| |||| 
seq2  ACTTTGATGAGGGAA--TTGGGTTTC-TTTCTCAAACCCAGAGTCTGTT-  46

seq1  CTCTATTTGCCCTCCAGAAATAACATTGCCAAAACAACTTGCCCACAGTA  100
      |||||||| |||||||| ||||||| |||||||||||||| |||||||||
seq2  CTCTATTT-CCCTCCAG-AATAACA-TGCCAAAACAACTTCCCCACAGTA  93

seq1  GATCTATGTATAGTTACTATTTATTGCAAAAGTTAAAATGCAAAACAGAG  150
      ||||| ||||||||| | ||||||| | ||||||||||||||||||||||
seq2  GATCT-TGTATAGTT-CCATTTATT-CCAAAGTTAAAATGCAAAACAGAG  140

seq1  TAAAAAATTCCATGCAGGAGTAAGACAGTAAGTTGAGAAGTAATTTTATC  200
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TAAAAAATTCCATGCAGGAGTAAGACAGTAAG-TGAGAAGTAATTTTATC  189

seq1  TAGTTAATGACTTCTTAAATAAAGCCAACAAAGTGGTTAAGATTTATTCT  250
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAATGAC-TCTTAAATAAAGCCAACAAAGTGGTTAAGATTTATTCT  238

seq1  TCTTATTTTCTTTGGCAGCTAAT-AAACCCATACCTAAACTGAAATATGG  299
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCTTATTTTCTTTGGCAGCTAATAAAACCCATACCTAAACTGAAATATGG  288

seq1  TAGTAATTCTC-AATAATTTTATCAAATGATACTAAAATTTTTCATTATT  348
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAGTAATTCTCAAATAATTTTATCAAATGATACTAAAATTTTTCATTATT  338

seq1  ACTTTTTAAAGGCATTTTTATTAGACATTTTCTTCATTTATATTTCAAAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTAAAGGCATTTTTATTAGACATTTTCTTCATTTATATTTCAAAT  388

seq1  GCTATCCCCAAAGTCCCCTATACCCTTTCCCTGCCCTGCTCCCTATGCCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCCCCAAAGTCCCCTATACCCTTTCCCTGCCCTGCTCCCTATGCCA  438

seq1  GAAAGATTTTGCTGACAGGACCCTGACATAGCTCTTTCTTGTGAGGCTAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATTTTGCTGACAGGACCCTGACATAGCTCTTTCTTGTGAGGCTAT  488

seq1  GACAATGCCTGGCAAATACAGAAGTGGATGCTCACAGTCATCTATTGGAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATGCCTGGCAAATACAGAAGTGGATGCTCACAGTCATCTATTGGAT  538

seq1  GAAAAACAGGGGCCCTAATGAAGGAGCTAGAGAAAGTACCCAAGGAGCTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACAGGGGCCCTAATGAAGGAGCTAGAGAAAGTACCCAAGGAGCTG  588

seq1  AAGGGGTCTGCAACCCTATAGGAGGAACAACAATATTAACTAACCAGTAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGTCTGCAACCCTATAGGAGGAACAACAATATTAACTAACCAGTAA  638

seq1  CCCCCAGAGCTGTGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAGAGCTGTGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTC  688

seq1  GGCCATCGATGGGAGGAGAGGCCATTATTACTTTCTTAATATTTTTCTAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATCGATGGGAGGAGAGGCCATTATTACTTTCTTAATATTTTTCTAT  738

seq1  TAAAAATTTGGTTTTTTAATGATGTGAACTACAAATTGAATAAAATCCAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTTGGTTTTTTAATGATGTGAACTACAAATTGAATAAAATCCAT  788

seq1  GTCCAGGGATATTACTTTAAATCCTGTTTGATGTTAAATAAAGATTAGAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGGGATATTACTTTAAATCCTGTTTGATGTTAAATAAAGATTAGAC  838

seq1  ATAATATATTAAAATAATATTACATATGTATAATATGCATATGAGTAAAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATATTAAAATAATATTACATATGTATAATATGCATATGAGTAAAT  888

seq1  ATGAATATATAATTACATATGTATGTAAGTTTCTATGTGTTTATACATGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATATATAATTACATATGTATGTAAGTTTCTATGTGTTTATACATGT  938

seq1  ATATTCTATATTTTGATATTATTTTCCTCAAGCTACTAATTTGATTCGAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTATATTTTGATATTATTTTCCTCAAGCTACTAATTTGATTCGAC  988

seq1  TTGGAATTC  1007
      |||||||||
seq2  TTGGAATTC  997