BAC Information

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BAC

Clone NameB6Ng01-034P24
ChromosomeX (Build37)
Map Location 85,298,921 - 85,299,991
singlet/doubletsinglet
Overlap genenone
Upstream geneIl1rapl1, LOC667876
Downstream geneEG667883, LOC667891, EG245506, LOC667911, LOC100041707, EG436213, LOC667919, LOC100041727
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034P24.bB6Ng01-034P24.g
ACCDH863589DH863590
length1,1071,116
definitionDH863589|Mus musculus domesticus DNA, BAC clone: B6Ng01-034P24, 5' end.DH863590|Mus musculus domesticus DNA, BAC clone: B6Ng01-034P24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccatctccttcagggcccattgtgcatcctattcttccataaga
gtccctaagctccatccactgtttggctgtgggtgtctgtatctgtctga
gtgagttgctgtgtggagctgctcagaagacagccatgctcttgtctgca
agtataacagagtattattagttgtgttagggattggtgcttgcccatgg
gatgggtctcaagttggaccagttattggctggccatttccccagtctct
gctccctcccccatacctgcattacttgtagaccagataaattttgggtt
aaaagttttgtgggtgagtgtctctattattctacgggggtttctgtcta
tctacaggtggtagcctcttcaggttccatatccttaatatagtgagtca
cagctaaggtcactcctgttgattcttgtgctcctcccttattgcaggtc
tttgtcttgtcctggagatgcctcctgtctcctcacacttgtcagtttca
catttcttttcatttttcatggtcaaatattatttcaccaaacatacttt
agttttacagtaattttcagtagactgacatatgggtgggaagaacatat
tgaaagctatagtttctgggtaaatatttttctggaaggaaccacaaatg
tctatagaggtgagcacaatagaactagtcaatatgcttttgaaatgtaa
tcttggtgaagtaaaaaaaaaatgtttaaaaaaaaaggggtatgggaaac
taaactctgaactctttgaaggatttaaaggaaaaaccaaaaagcaaatt
tagttttcccaaagaagttgtatgttaaaacagcttttaaatagtttgct
gaaggttactaatagaatagttaggaaaccctaggtaaacgtcttaaggg
ttattgagaaaaatgctaccagtgaattattcactttcagccaaatttga
atggttgagttacctgtatataaatagaatagattatgcgactaatggca
ttatattctgcggcctagatagggaactcggagatgcgccctttgtgaaa
aatatttgcttgtaaaagggttgactttctctggtgttgcgttgtgatgc
gtggtct
gaattctttagtacatacatttaatcccaaacaatggtgtcaaattgaga
ggcagataaaatgatgaatcagagatttatttatttgacagaatgggtca
gaaataggatacacccagctctcaggagtaaagctattaggagcagccca
gggagagagaattcatcagttcacttcctcaatgagttgaaagttgagtc
cagtgatattcagtgtaataagtttactgcaatagagttcattccagagt
tcatgcagctcaggccaggtcagaagacgcagttgaagccagagaatagg
aaggagccagaaattagagcagataaccagagttagtttgaggcagtgta
gagcaatttagtcagaagctgagaaaagccaatctgaattagtcagcttg
gagaggagttttgatccagaatagctaaggtgaatcattcagtcaaagtt
cagaaagaaccagaaaggctgagcttaatcagtaactagcctccaggaat
acaatatctggcaaatatcaggcaaataaaagatgcttttacaaattcgt
ttaagaatgggatttgttttacaattctatttattcatgttttcttataa
gtgcagatttagtagagaactgagagtagggttatatcctttgctgtttg
atagtgaagtttacttagtaaagaaggatactttttatgcttactgtgca
tcagacaccgtatgatccatacatgtccttatatactgcagtaaatgaaa
gaaacttgtattttgctctaatattgttttcaatttagagtagtagtaaa
tatattcaacaatttttgtgataatttatttgactacctattgttgggcc
agccactgtttgtaacaggtgtttgtgatttggaaaaatgcctaacatat
agcacatgcagatataagtgaaatataaagttcacttttattaatcttta
tcacgtaccagccactcttcaatatacctgttatgttgagaaccaaatgc
tttcatccttggacattacattcaaagaatctaatctgtatccctctaaa
tgatgcagcatttcttccattattaccttttatgattcttaggacctgga
attattcacttatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_85298921_85299991
seq2: B6Ng01-034P24.g_116_1184

seq1  AGAGGCAGATAAAATGATGAATCAGAGATTTATTTATTTGACAGAATGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGATAAAATGATGAATCAGAGATTTATTTATTTGACAGAATGGG  50

seq1  TCAGAAATAGGATACACCCAGCTCTCAGGAGTAAAGCTATTAGGAGCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATAGGATACACCCAGCTCTCAGGAGTAAAGCTATTAGGAGCAGC  100

seq1  CCAGGGAGAGAGAATTCATCAGTTCACTTCCTCAATGAGTTGAAAGTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGAGAGAGAATTCATCAGTTCACTTCCTCAATGAGTTGAAAGTTGA  150

seq1  GTCCAGTGATATTCAGTGTAATAAGTTTACTGCAATAGAGTTCATTCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGTGATATTCAGTGTAATAAGTTTACTGCAATAGAGTTCATTCCAG  200

seq1  AGTTCATGCAGCTCAGGCCAGGTCAGAAGACGCAGTTGAAGCCAGAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATGCAGCTCAGGCCAGGTCAGAAGACGCAGTTGAAGCCAGAGAAT  250

seq1  AGGAAGGAGCCAGAAATTAGAGCAGATAACCAGAGTTAGTTTGAGGCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAGCCAGAAATTAGAGCAGATAACCAGAGTTAGTTTGAGGCAGT  300

seq1  GTAGAGCAATTTAGTCAGAAGCTGAGAAAAGCCAATCTGAATTAGTCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGCAATTTAGTCAGAAGCTGAGAAAAGCCAATCTGAATTAGTCAGC  350

seq1  TTGGAGAGGAGTTTTGATCCAGAATAGCTAAGGTGAATCATTCAGTCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGAGGAGTTTTGATCCAGAATAGCTAAGGTGAATCATTCAGTCAAA  400

seq1  GTTCAGAAAGAACCAGAAAGGCTGAGCTTAATCAGTAACTAGCCTCCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGAAAGAACCAGAAAGGCTGAGCTTAATCAGTAACTAGCCTCCAGG  450

seq1  AATACAATATCTGGCAAATATCAGGCAAATAAAAGATGCTTTTACAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAATATCTGGCAAATATCAGGCAAATAAAAGATGCTTTTACAAATT  500

seq1  CGTTTAAGAATGGGATTTGTTTTACAATTCTATTTATTCATGTTTTCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTAAGAATGGGATTTGTTTTACAATTCTATTTATTCATGTTTTCTTA  550

seq1  TAAGTGCAGATTTAGTAGAGAACTGAGAGTAGGGTTATATCCTTTGCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGCAGATTTAGTAGAGAACTGAGAGTAGGGTTATATCCTTTGCTGT  600

seq1  TTGATAGTGAAGTTTACTTAGTAAAGAAGGATACTTTTTATGCTTACTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAGTGAAGTTTACTTAGTAAAGAAGGATACTTTTTATGCTTACTGT  650

seq1  GCATCAGACACCGTATGATCCATACATGTCCTTATATACTGCAGTAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGACACCGTATGATCCATACATGTCCTTATATACTGCAGTAAATG  700

seq1  AAAGAAACTTGTA-TTTGCTCTAATATTGTTTTCAATTTAGAGTAGTAGT  749
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAAGAAACTTGTATTTTGCTCTAATATTGTTTTCAATTTAGAGTAGTAGT  750

seq1  AAATATATTCAACAA-TTTTGTGATAATTTA-TTGACTACCTA-TGTTGG  796
      ||||||||||||||| ||||||||||||||| ||||||||||| ||||||
seq2  AAATATATTCAACAATTTTTGTGATAATTTATTTGACTACCTATTGTTGG  800

seq1  GCCAGCCACTGTTTGTAACAGGTGTTTGTGAATTGGAAAAATGCCTAACA  846
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GCCAGCCACTGTTTGTAACAGGTGTTTGTGATTTGGAAAAATGCCTAACA  850

seq1  TATAGCACATGCAGATAATAAGTGAAATATAAAGTTCACTTTTATTAATC  896
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TATAGCACATGCAGAT-ATAAGTGAAATATAAAGTTCACTTTTATTAATC  899

seq1  TTTTATCACGTACCAGCCACTCTTCAATATACCTGTTATGTTGAGAACCC  946
       |||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  -TTTATCACGTACCAGCCACTCTTCAATATACCTGTTATGTTGAGAA-CC  947

seq1  AAATGCTTTCAT-CTTGGACATTACATTCCAAAGATTTCTATCTGTATCC  995
      |||||||||||| ||||||||||||||| |||||| |   ||||||||||
seq2  AAATGCTTTCATCCTTGGACATTACATT-CAAAGAATCTAATCTGTATCC  996

seq1  CTCTAAAATGATGCAGCATTTTCTTCTATTATTACTTTTTATTGATTCTT  1045
      |||| ||||||||||||| ||||||| |||||||| ||||| ||||||||
seq2  CTCT-AAATGATGCAGCA-TTTCTTCCATTATTACCTTTTA-TGATTCTT  1043

seq1  AGGAACCTGGATTATTTCAC-TATTTT  1071
      ||| ||||||| |  ||||| ||||||
seq2  AGG-ACCTGGAATTATTCACTTATTTT  1069