BAC Information

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BAC

Clone NameB6Ng01-036M10
ChromosomeX (Build37)
Map Location 33,465,481 - 33,615,798
singlet/doubletdoublet
Overlap geneDock11
Upstream geneLOC100039550, LOC100039557, LOC100039573, EG665074, LOC100039585, LOC100039497, EG210457
Downstream geneIl13ra1, Zcchc12, LOC547166, Lonrf3, EG621901, Pgrmc1, B230333C21Rik, LOC621983, Slc25a43, Slc25a5, C330007P06Rik, Ube2a, Nkrf, Sept6, Ankrd58
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036M10.bB6Ng01-036M10.g
ACCDH864842DH864843
length934513
definitionDH864842|Mus musculus domesticus DNA, BAC clone: B6Ng01-036M10, 5' end.DH864843|Mus musculus domesticus DNA, BAC clone: B6Ng01-036M10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,615,221 - 33,615,798)(33,465,481 - 33,465,997)
sequence
gaattctcttttaacttgtcaccacaaaagctttgataagagtaatggat
catccatgtaccttctaacagagttattctcagaatcactcaggcacttt
tccagtgctccttccctgcagacttggaataatactaaatgaaggtagga
atcaaaagtgcctatttgaaatatgattatacaaactaatctatataaac
aaatgaaatacaaaatgtgaatattatatttcaacatgtatatgaaggta
tacattcatgttggtatgcatattttaaaaattagccagttaaggtggtc
aaaagccaaagcaacaaaggttttacgcttaaatgaaatagacaaaggaa
aagaatagtatacatattatattccctctctttgagtcttagttcaggtc
ttaagccttttttttttttgggtttgatttggctttctaatattgagttt
tcaaagctggaaagatgctcagtggttaagagcacttcctgctttttcaa
aggacctgaccagtactctcattgggaggctcacattgcttctaactcca
gttccacaggatctgacacccttttttccttgcctccacactgtatacat
gaggcagacacacacacacacacacacacacacacacatccctccctcca
ccacataacagatacatgcatacatatacacacaaatggaaacaaatcta
aaatatattgggtgggctgtttcttttttgttcattttttttatgtttga
tgtataaaatacatttaatttttttattttttaatagatgctttcttcat
ttacatttcaaatgctatcccctttcctagtttcctctctgaaaatcccc
tataccctcccctttccccctgctccacaacccatccactcccacttcct
ggccctggcattccctatactggggcatagaatc
tttctgacagagttctggattcttctttagagaaactgctggtgtctaag
gaaggaagactaacagtttagcaggggaatgggctgaatatttttgaaag
gtatccagcactttcatgagcactgcctgacttttggaaaggactgtctt
tgccagtcctcttgatagggtatcgagttcgaggctagcctggtctacaa
agtgagttccggggagccagggctatacagagaaaccctgtttcgaaaaa
ccaaaagaaaaaaaaaggaaagaaatagggtattattgggttgtcagtgt
ggcttgttgatcgacttacccaataagcgcacggtcctgcatttcctcct
acaaactggaggggaaggtgatgtgggggcggggggagaaaagagagcaa
atctcaactttgacataaatggcaataaatctctcacttactccaagaaa
aatcataaatcctcttttgccagaattatattgattgtgaattatgttgg
ttgaactaactgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_33615221_33615798
seq2: B6Ng01-036M10.b_46_623 (reverse)

seq1  GAAAAAAGGGTGTCAGATCCTGTGGAACTGGAGTTAGAAGCAATGTGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAGGGTGTCAGATCCTGTGGAACTGGAGTTAGAAGCAATGTGAGC  50

seq1  CTCCCAATGAGAGTACTGGTCAGGTCCTTTGAAAAAGCAGGAAGTGCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAATGAGAGTACTGGTCAGGTCCTTTGAAAAAGCAGGAAGTGCTCT  100

seq1  TAACCACTGAGCATCTTTCCAGCTTTGAAAACTCAATATTAGAAAGCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCACTGAGCATCTTTCCAGCTTTGAAAACTCAATATTAGAAAGCCAA  150

seq1  ATCAAACCCAAAAAAAAAAAAGGCTTAAGACCTGAACTAAGACTCAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAACCCAAAAAAAAAAAAGGCTTAAGACCTGAACTAAGACTCAAAGA  200

seq1  GAGGGAATATAATATGTATACTATTCTTTTCCTTTGTCTATTTCATTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAATATAATATGTATACTATTCTTTTCCTTTGTCTATTTCATTTAA  250

seq1  GCGTAAAACCTTTGTTGCTTTGGCTTTTGACCACCTTAACTGGCTAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTAAAACCTTTGTTGCTTTGGCTTTTGACCACCTTAACTGGCTAATTT  300

seq1  TTAAAATATGCATACCAACATGAATGTATACCTTCATATACATGTTGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATATGCATACCAACATGAATGTATACCTTCATATACATGTTGAAA  350

seq1  TATAATATTCACATTTTGTATTTCATTTGTTTATATAGATTAGTTTGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATATTCACATTTTGTATTTCATTTGTTTATATAGATTAGTTTGTAT  400

seq1  AATCATATTTCAAATAGGCACTTTTGATTCCTACCTTCATTTAGTATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATATTTCAAATAGGCACTTTTGATTCCTACCTTCATTTAGTATTAT  450

seq1  TCCAAGTCTGCAGGGAAGGAGCACTGGAAAAGTGCCTGAGTGATTCTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGTCTGCAGGGAAGGAGCACTGGAAAAGTGCCTGAGTGATTCTGAG  500

seq1  AATAACTCTGTTAGAAGGTACATGGATGATCCATTACTCTTATCAAAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTCTGTTAGAAGGTACATGGATGATCCATTACTCTTATCAAAGCT  550

seq1  TTTGTGGTGACAAGTTAAAAGAGAATTC  578
      ||||||||||||||||||||||||||||
seq2  TTTGTGGTGACAAGTTAAAAGAGAATTC  578

seq1: chrX_33465481_33465997
seq2: B6Ng01-036M10.g_67_585

seq1  GAATTCTTTCTGACAGAGTTCTGGATTCTTCTTTAGAGAAACTGCTGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTGACAGAGTTCTGGATTCTTCTTTAGAGAAACTGCTGGTG  50

seq1  TCTAAGGAAGGAAGACTAACAGTTTAGCAGGGGAATGGGCTGAATATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGGAAGGAAGACTAACAGTTTAGCAGGGGAATGGGCTGAATATTTT  100

seq1  TGAAAGGTATCCAGCACTTTCATGAGCACTGCCTGACTTTTGGAAAGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGTATCCAGCACTTTCATGAGCACTGCCTGACTTTTGGAAAGGAC  150

seq1  TGTCTTTGCCAGTCCTCTTGATAGGGTATCGAGTTCGAGGCTAGCCTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTGCCAGTCCTCTTGATAGGGTATCGAGTTCGAGGCTAGCCTGGT  200

seq1  CTACAAAGTGAGTTCCGGGGAGCCAGGGCTATACAGAGAAACCCTGTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAAGTGAGTTCCGGGGAGCCAGGGCTATACAGAGAAACCCTGTTTC  250

seq1  GAAAAACCAAAAGAAAAAAAAAGGAAAGAAATAGGGTATTATTGGGTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACCAAAAGAAAAAAAAAGGAAAGAAATAGGGTATTATTGGGTTGT  300

seq1  CAGTGTGGCTTGTTGATCGACTTACCCAATAAGCGCACGGTCCTGCATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGGCTTGTTGATCGACTTACCCAATAAGCGCACGGTCCTGCATTT  350

seq1  CCTCCTACAAACTGGAGGGGAAGGTGATGTGGGGGCGGGGGGAGAAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTACAAACTGGAGGGGAAGGTGATGTGGGGGCGGGGGGAGAAAAGA  400

seq1  GAGCAAATCTCAACTTTGACATAAATGGCAATAAATCTCTCACTTACTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAATCTCAACTTTGACATAAATGGCAATAAATCTCTCACTTACTCC  450

seq1  AAG-AAAATCAATAATCCTCTTTTGCCAGAATTATATTGATTGTGAAATA  499
      ||| |||||||  |||||||||||||||||||||||||||||||||| ||
seq2  AAGAAAAATCATAAATCCTCTTTTGCCAGAATTATATTGATTGTGAATTA  500

seq1  TGTTGG-TGAACTAACTGT  517
      |||||| ||||||||||||
seq2  TGTTGGTTGAACTAACTGT  519