BAC Information

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BAC

Clone NameB6Ng01-037P24
ChromosomeX (Build37)4 (Build37)
Map Location 91,684,705 - 91,685,83310,664,984 - 10,665,545
singlet/doubletsingletsinglet
Overlap genenone
Upstream genePola1, EG629581, Pcyt1b, Pdk3, EG668103, LOC100042041, AU015836, EG245516, LOC100042062, EG629591, Zfx, Eif2s3x, Klhl15, LOC385495, LOC670263, LOC100042098, LOC631145, 0610008C08Rik, EG668148
Downstream geneMaged1, LOC668150, EG385499, EG668156, Gspt2, LOC385500, Zxdb, LOC631331, EG631319, Zxda, Gm371, 9630042H07Rik, Arhgef9, LOC619688, LOC100042189, 2810002O09Rik, Asb12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037P24.bB6Ng01-037P24.g
ACCDH865699DH865700
length1,121779
definitionDH865699|Mus musculus domesticus DNA, BAC clone: B6Ng01-037P24, 5' end.DH865700|Mus musculus domesticus DNA, BAC clone: B6Ng01-037P24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(91,684,705 - 91,685,833)(10,664,984 - 10,665,545)
sequence
gaattcatctccccccagggatgagcccttaaattggttatctacaagtt
atcaacactggaaaatcacacacacacatgcacacacacaccattgaata
gattcagaagattgtctttatatatttatatgtgtatacatatatgtcta
tatattaaggaatgataattaaagaaaaagaggacatggatttgagagag
agtgagctagggcagacatgagaggtctagaatgaggagaaggaaattat
gtcattatattagatctttaaaaaaattatagaaaagaaaaaagcattat
agacgtggctctcatctcctgcattgctttttggtctttcagagataatt
ctatcctggagttaaatagttccttctttatatgcctatacctttaatac
ttgtatagttattgttatctataaacatgaattttttgtatgctcttgaa
ctttacttaaaaggaactaagcaggaaaaatggaacagaattcagaacaa
tacattttaagcaatttcaattattaaactgcttcttttctttccttcca
tacctccaggctcctcccctcctctcttttcctctgtccatccatacctt
ttcttcaattctcaatttcttgctgccttacttttccttagtgatgtgca
aatagctgtgtggttgttcacctgttttctttatttgtaacctcttacct
aaaatatctctgtgccaatggaatacttctgtgccaaatccttgtactta
agaacaagtcactggcagcaacatagaggtttgctgaagtgtttgcatat
gctgactatcccagcgtgtacctaggagggactggccggccctgaacaag
atccttttgcaatttcccagggatcatgtgtgcatctagactgtctctta
gagcaggttggaaacaagaaaaggtatgcgcatcaatgtgtataaggctt
agaatatctaatggaagatagtgctacaggaagtagctgtgcgctacaat
tgaatagctgctactgctgctgccctttcagaattgaacttagtcatttg
agaattgtcatagtttctgaatggaagctgcatatgtctgaggtgtacca
ggatgttctgtaattataaaa
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgatttct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatcta
gtcctgggatttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
ttggtacctggtatctgtccagaaatttgtccatttcgtccaggtttttc
cagtttttgttgagtataagcttttgtagaaggatctgatggtgtttttg
gatttctttcaggatctgttgttatgtctcccttttcatttcttgatttt
gttgattggatttttgtccctttgccctctgtgagtctagcttagggctt
tatctatcttgttgattttctcaaaaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_91684705_91685833
seq2: B6Ng01-037P24.b_47_1167

seq1  GAATTCATCTCCCCCCAGGGATGAGCCCTTAAATTGGTTATCTACAAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTCCCCCCAGGGATGAGCCCTTAAATTGGTTATCTACAAGTT  50

seq1  ATCAACACTGGAAAATCACACACACACATGCACACACACACCATTGAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACACTGGAAAATCACACACACACATGCACACACACACCATTGAATA  100

seq1  GATTCAGAAGATTGTCTTTATATATTTATATGTGTATACATATATGTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAGAAGATTGTCTTTATATATTTATATGTGTATACATATATGTCTA  150

seq1  TATATTAAGGAATGATAATTAAAGAAAAAGAGGACATGGATTTGAGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAAGGAATGATAATTAAAGAAAAAGAGGACATGGATTTGAGAGAG  200

seq1  AGTGAGCTAGGGCAGACATGAGAGGTCTAGAATGAGGAGAAGGAAATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGCTAGGGCAGACATGAGAGGTCTAGAATGAGGAGAAGGAAATTAT  250

seq1  GTCATTATATTAGATCTTTAAAAAAATTATAGAAAAGAAAAAAGCATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTATATTAGATCTTTAAAAAAATTATAGAAAAGAAAAAAGCATTAT  300

seq1  AGACGTGGCTCTCATCTCCTGCATTGCTTTTTGGTCTTTCAGAGATAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGTGGCTCTCATCTCCTGCATTGCTTTTTGGTCTTTCAGAGATAATT  350

seq1  CTATCCTGGAGTTAAATAGTTCCTTCTTTATATGCCTATACCTTTAATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTGGAGTTAAATAGTTCCTTCTTTATATGCCTATACCTTTAATAC  400

seq1  TTGTATAGTTATTGTTATCTATAAACATGAATTTTTTGTATGCTCTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATAGTTATTGTTATCTATAAACATGAATTTTTTGTATGCTCTTGAA  450

seq1  CTTTACTTAAAAGGAACTAAGCAGGAAAAATGGAACAGAATTCAGAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTTAAAAGGAACTAAGCAGGAAAAATGGAACAGAATTCAGAACAA  500

seq1  TACATTTTAAGCAATTTCAATTATTAAACTGCTTCTTTTCTTTCCTTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTAAGCAATTTCAATTATTAAACTGCTTCTTTTCTTTCCTTCCA  550

seq1  TACCTCCAGGCTCCTCCCCTCCTCTCTTTTCCTCTGTCCATCCATACCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCAGGCTCCTCCCCTCCTCTCTTTTCCTCTGTCCATCCATACCTT  600

seq1  TTCTTCAATTCTCAATTTCTTGCTGCCTTACTTTTCCTTAGTGATGTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAATTCTCAATTTCTTGCTGCCTTACTTTTCCTTAGTGATGTGCA  650

seq1  AATAGCTGTGTGGTTGTTCACCTGTTTTCTTTATTTGTAACCTCTTACCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTGTGTGGTTGTTCACCTGTTTTCTTTATTTGTAACCTCTTACCT  700

seq1  AAAATATCTCTGTGCCAATGGAATACTTCTGTGCCAAATCCTTGTACTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATCTCTGTGCCAATGGAATACTTCTGTGCCAAATCCTTGTACTTA  750

seq1  AGAACAAGTCACTGGCAGCAACATAGAGGTTTGCTGAAGTGTTTGCATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAGTCACTGGCAGCAACATAGAGGTTTGCTGAAGTGTTTGCATAT  800

seq1  GCTGACTATCCCAGCGTGTACCTAGGAGGGACTGGCCGGCCCTGGACAAG  850
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GCTGACTATCCCAGCGTGTACCTAGGAGGGACTGGCCGGCCCTGAACAAG  850

seq1  ATCCTTTTGCACTTTCCCAGGGATCATGTGTGCATCTAGACTGTCTCTTA  900
      ||||||||||| ||||||||||||||||||||||||||||||||||||| 
seq2  ATCCTTTTGCAATTTCCCAGGGATCATGTGTGCATCTAGACTGTCTCTT-  899

seq1  AGAGCAGGTTGGAAAC-AGGAAAGGTATGCGCATCAATGTGTATAAGGCT  949
      |||||||||||||||| || ||||||||||||||||||||||||||||||
seq2  AGAGCAGGTTGGAAACAAGAAAAGGTATGCGCATCAATGTGTATAAGGCT  949

seq1  TAGAATATCTAATGG-AGATAGTGCCTACAGGAAGTAGCTGTGCGCTAC-  997
      ||||||||||||||| |||||||| |||||||||||||||||||||||| 
seq2  TAGAATATCTAATGGAAGATAGTG-CTACAGGAAGTAGCTGTGCGCTACA  998

seq1  AGTGAATAGCTGCTTACTGCTGCTGTCCTTTTCAGAA-TGGACTTAGTCA  1046
      | ||||||||||| ||||||||||| || |||||||| || |||||||||
seq2  ATTGAATAGCTGC-TACTGCTGCTG-CCCTTTCAGAATTGAACTTAGTCA  1046

seq1  TTTGGAGATGGGTCATAGTTCTTGAATGAAGTCTGGCCATATGTCTGAGG  1096
      ||| ||||   |||||||||  |||||| |  |||  |||||||||||||
seq2  TTT-GAGAATTGTCATAGTTTCTGAATGGAAGCTG--CATATGTCTGAGG  1093

seq1  TGACCCAGGATGTGTCTTTGATTTATTATAAAA  1129
      ||  ||||||||| |||     | |||||||||
seq2  TGTACCAGGATGT-TCT----GTAATTATAAAA  1121

seq1: chr4_10664984_10665545
seq2: B6Ng01-037P24.g_282_849 (reverse)

seq1  GTTCTTTGAGAAAATCAACAAGATAGATAAA-CCCTTAGCTAGACTCACT  49
      ||| ||||||||||||||||||||||||||| |||| |||||||||||| 
seq2  GTTTTTTGAGAAAATCAACAAGATAGATAAAGCCCTAAGCTAGACTCAC-  49

seq1  AGAGGGCAAAGGGACAAAATCCTAATCAACAAAATC-AGAAATGAAAAGG  98
      |||||||||||||||||||  | ||||||||||||| |||||||||||||
seq2  AGAGGGCAAAGGGACAAAAATCCAATCAACAAAATCAAGAAATGAAAAGG  99

seq1  GAGACATAACAACAGATCCTG-AAGAAATCC-AAAACACCATCAGATCCT  146
      ||||||||||||||||||||| ||||||||| ||||||||||||||||||
seq2  GAGACATAACAACAGATCCTGAAAGAAATCCAAAAACACCATCAGATCCT  149

seq1  TCTACAAAAGCTTATACTCAAC-AAAACTGG-AAAACCTGGATGAAATGG  194
      |||||||||||||||||||||| |||||||| |||||||||| |||||||
seq2  TCTACAAAAGCTTATACTCAACAAAAACTGGAAAAACCTGGACGAAATGG  199

seq1  ACAAATTTCTGGACAGATACCAGGTACC-AAAGTTGAATCAGGATCAAGT  243
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ACAAATTTCTGGACAGATACCAGGTACCAAAAGTTGAATCAGGATCAAGT  249

seq1  TGACCTTCTAAACAGTCCCATATCCCCTAAAGAAATAGAAGCAGTTATTA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTCTAAACAGTCCCATATCCCCTAAAGAAATAGAAGCAGTTATTA  299

seq1  ATAGTCTCCCAGCCAAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAG  343
      ||||||||||||||||||||| |||||||| |||||||||||||||||||
seq2  ATAGTCTCCCAGCCAAAAAAATCCCAGGACTAGATGGGTTTAGTGCAGAG  349

seq1  TTCTATCAGACCTTCAAAGAAGATCTAATTCCAGTTCTGCACAAACTATT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCAGACCTTCAAAGAAGATCTAATTCCAGTTCTGCACAAACTATT  399

seq1  TCACAAGATAGAAGTAGAAGGTACTCTACCCAACTCATTTTATGAAGCCA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGATAGAAGTAGAAGGTACTCTACCCAACTCATTTTATGAAGCCA  449

seq1  CTATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAAC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAAC  499

seq1  TTCAGACCAATTTCTCTTATGAATATCGATGCAAAAATCCTTAATAAAAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGACCAATTTCTCTTATGAATATCGATGCAAAAATCCTTAATAAAAT  549

seq1  TCTCGCTAACCGAATCCAA  562
      |||||||||||||||||||
seq2  TCTCGCTAACCGAATCCAA  568