BAC Information

Click to search

BAC

Clone NameB6Ng01-038F17
ChromosomeX (Build37)
Map Location 121,570,182 - 121,633,667
singlet/doubletdoublet
Overlap geneEG434843
Upstream geneLOC665281, EG625591, LOC665325, EG382265, LOC665364, EG546368, LOC100038940, LOC100038941, EG625699, LOC100038942, LOC100039828
Downstream geneEG665463, EG665522, LOC100038969, LOC100038978, EG665579, EG665611, EG626048
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038F17.bB6Ng01-038F17.g
ACCDH865941DH865942
length1,0921,023
definitionDH865941|Mus musculus domesticus DNA, BAC clone: B6Ng01-038F17, 5' end.DH865942|Mus musculus domesticus DNA, BAC clone: B6Ng01-038F17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,632,573 - 121,633,667)(121,570,182 - 121,571,204)
sequence
gaattcaaagactcatttggtccctggaatgaagttaaaggtccctctgt
aggtttagagagatctaaaggctcttctgtggaaagggaagaatccaaaa
ggcttagggaagaaagtgaggaactaagttgggcagaaattgcaagttcc
agaggtgattcattggatatcacatgtcctggggtagctgttgaaaattt
ttgtgcacctgatgcaaatgatgaatatcctagagttccctggggaggtg
gcaaaggttctacagggccttgtgtagttgctgaaatcctcagagatccc
tggtcagatctcaaaatccttgctgtattttgagcatggtgggtataacc
ctgacacactgggaaagatggtgagtctgctactgtgtagtgtgtagatg
tggactgagttcctataccttgtgtatgtaaagaaagacttgaaaatgtt
ttggaagatgtagaatgttgggtagacatttgtggacatgtggacagata
tacggtcccctgtgcagagagaccgggactcccatctccatgagcagaat
cagaagatgcgggagtcccttgttttgaggaggaaagacccagaggatta
tgagaacattcacaacattgtgatgtattcatcattgcctgggctgagat
agaaagtttcagaggcccctgggcagattgcaaaggtgctagataccctt
ggccaaatgggaaagtctttgcaactcctttggacagaagaggaatgtct
accaggttttggaggtgatggtggcaaagttcctagaatggctgaagtag
actgagaagatgctacagcctgcctcactttgtggaaaaaggcctaaagc
actctgtgattcttcatattgtgccaatatccctgtggcatctgttaatt
ttctagatttctttgtttggggaaaatagaactttgcatgggcaaagttc
cctcttgtgccctggaaagttccttgggcttttgaaaagatgagatagtt
actagatccactgtagtaagtacagatgcttctgacaccctagtacaggt
ggcaatgtcttttatctgatggtgtaggtagaaggttcttga
gaattcttttaaactgacttggcttttattttattttattgaatttggaa
aaaaaatatctttgagaaagaatgtgtttatcattaatccccttgaatta
aggcaacattaaatggagaaaggcggctagaaaatgtaagacatattgag
agaatttggatgtctgtggacaaaatatttcattgtgcattcattttatg
ttttttgacatcttatgttcatatttttaatcacaaagccacaagtcctt
gaaatggaactttgtaaaatgaagttcataccaaaaatatatatattgaa
tttgtttaaaactaaaattagcatatcttagaattgggaatgattaaaaa
gctttgggaactctgtatgttttacattcgccaatgatactagtgctgat
gaaacatggtcaaacttttcagatacattaactttagatatgattacaaa
agataacatacttagtgaaaaagtatagatctggtaattgggactattat
atattaaattataactaaataaatctagattaaaagaatataagcagcta
tctaattgaacacagggtccacacaacaggaagaaaatccagtattgtat
tagaagtgtacttctcaccctaatctaagaaatttctctttaccataaat
ggaacctgttacagaaatccacactgggcataatgcaaagatcaatatat
catgcgaagcctagcctcaattgatataatagcacaactcctgcatccag
tatgaatcagaatttctggacatctgccatgagaccacctctcctagtaa
tgcctgcttgaccaaatcatgaataataaaagtatcaataaacatgttaa
tgtggaaggagaaaaattgcagtgttcccaaccacagaaaaagtactaca
ggtagataatgactagtgagaaaaggaacattgatctctctaagccccat
gattgaccaatataaagtcatcagtcctgaaaccacataaatacaaaaca
taaacctggattaagcattgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_121632573_121633667
seq2: B6Ng01-038F17.b_47_1138 (reverse)

seq1  TCAAGAAACCTTCTATCCTACACCATCAGATATAGGACATTGCCAACCTG  50
      ||||| ||||||||| |||||||||||||||| | ||||||||| |||||
seq2  TCAAG-AACCTTCTA-CCTACACCATCAGATAAAAGACATTGCC-ACCTG  47

seq1  TACT-GGGTGTTCAGGAGCATCTTGTACCTACTCCAGTGGTTCTAGTACC  99
      |||| ||||| |||| |||||| ||||| |||| |||||| ||||||| |
seq2  TACTAGGGTG-TCAGAAGCATC-TGTACTTACTACAGTGGATCTAGTAAC  95

seq1  TATCTCATCTTTTCAAAAGCCCAAGGAACTTTCCAGGGCACAAGAGGGAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCATCTTTTCAAAAGCCCAAGGAACTTTCCAGGGCACAAGAGGGAA  145

seq1  CTTTGCCCATGCAAAGTTCTATTTTCCCCAAACAAAGAAATCTAGAAAAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTTTGCCCATGCAAAGTTCTATTTTCCCCAAACAAAGAAATCTAGAAAA-  194

seq1  TTAACAGATGCCACAGGGATATTGGCACAATATGAAGAATCACAGAGTGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGATGCCACAGGGATATTGGCACAATATGAAGAATCACAGAGTGC  244

seq1  TTTAGGCCTTTTTCCAC-AAGTGAGGCAGGCTGTAGCATCTTCTCAGTCT  298
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTTAGGCCTTTTTCCACAAAGTGAGGCAGGCTGTAGCATCTTCTCAGTCT  294

seq1  ACTTCAGCCATTCTAGGAACTTTGCCACCATCACCTCCAAAACCTGGTAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGCCATTCTAGGAACTTTGCCACCATCACCTCCAAAACCTGGTAG  344

seq1  ACATTCCTCTTCTGTCC-AAGGAGTTGCAAAGACTTTCCCATTTGGCCAA  397
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACATTCCTCTTCTGTCCAAAGGAGTTGCAAAGACTTTCCCATTTGGCCAA  394

seq1  GGGTATCTAGCACCTTTGCAATCTGCCCAGGGGCCTCTGAAACTTTCTAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATCTAGCACCTTTGCAATCTGCCCAGGGGCCTCTGAAACTTTCTAT  444

seq1  CTCAGCCCAGGCAATGATGAATACATCACAATGTTGTGAATGTTCTCATA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCCAGGCAATGATGAATACATCACAATGTTGTGAATGTTCTCATA  494

seq1  ATCCTCTGGGTCTTTCCTCCTCAAAACAAGGGACTCCCGCATCTTCTGAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTGGGTCTTTCCTCCTCAAAACAAGGGACTCCCGCATCTTCTGAT  544

seq1  TCTGCTCATGGAGATGGGAGTCCCGGTCTCTCTGCACAGGGGACCGTATA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCATGGAGATGGGAGTCCCGGTCTCTCTGCACAGGGGACCGTATA  594

seq1  TCTGTCCACATGTCCACAAATGTCTACCCAACATTCTACATCTTCCAAAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCACATGTCCACAAATGTCTACCCAACATTCTACATCTTCCAAAA  644

seq1  CATTTTCAAGTCTTTCTTTACATACACAAGGTATAGGAACTCAGTCCACA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCAAGTCTTTCTTTACATACACAAGGTATAGGAACTCAGTCCACA  694

seq1  TCTACACACTACACAGTAGCAGACTCACCATCTTTCCCAGTGTGTCAGGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACACACTACACAGTAGCAGACTCACCATCTTTCCCAGTGTGTCAGGG  744

seq1  TTATACCCACCATGCTCAAAATACAGCAAGGATTTTGAGATCTGACCAGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACCCACCATGCTCAAAATACAGCAAGGATTTTGAGATCTGACCAGG  794

seq1  GATCTCTGAGGATTTCAGCAACTACACAAGGCCCTGTAGAACCTTTGCCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCTGAGGATTTCAGCAACTACACAAGGCCCTGTAGAACCTTTGCCA  844

seq1  CCTCCCCAGGGAACTCTAGGATATTCATCATTTGCATCAGGTGCACAAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCAGGGAACTCTAGGATATTCATCATTTGCATCAGGTGCACAAAA  894

seq1  ATTTTCAACAGCTACCCCAGGACATGTGATATCCAATGAATCACCTCTGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAACAGCTACCCCAGGACATGTGATATCCAATGAATCACCTCTGG  944

seq1  AACTTGCAATTTCTGCCCAACTTAGTTCCTCACTTTCTTCCCTAAGCCTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGCAATTTCTGCCCAACTTAGTTCCTCACTTTCTTCCCTAAGCCTT  994

seq1  TTGGATTCTTCCCTTTCCACAGAAGAGCCTTTAGATCTCTCTAAACCTAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTCTTCCCTTTCCACAGAAGAGCCTTTAGATCTCTCTAAACCTAC  1044

seq1  AGAGGGACCTTTAACTTCATTCCAGGGACCAAATGAGTCTTTGAATTC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGACCTTTAACTTCATTCCAGGGACCAAATGAGTCTTTGAATTC  1092

seq1: chrX_121570182_121571204
seq2: B6Ng01-038F17.g_67_1089

seq1  GAATTCTTTTAAACTGACTTGGCTTTTATTTTATTTTATTGAATTTGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTAAACTGACTTGGCTTTTATTTTATTTTATTGAATTTGGAA  50

seq1  AAAAAATATCTTTGAGAAAGAATGTGTTTATCATTAATCCCCTTGAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATATCTTTGAGAAAGAATGTGTTTATCATTAATCCCCTTGAATTA  100

seq1  AGGCAACATTAAATGGAGAAAGGCGGCTAGAAAATGTAAGACATATTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACATTAAATGGAGAAAGGCGGCTAGAAAATGTAAGACATATTGAG  150

seq1  AGAATTTGGATGTCTGTGGACAAAATATTTCATTGTGCATTCATTTTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTGGATGTCTGTGGACAAAATATTTCATTGTGCATTCATTTTATG  200

seq1  TTTTTTGACATCTTATGTTCATATTTTTAATCACAAAGCCACAAGTCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGACATCTTATGTTCATATTTTTAATCACAAAGCCACAAGTCCTT  250

seq1  GAAATGGAACTTTGTAAAATGAAGTTCATACCAAAAATATATATATTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGAACTTTGTAAAATGAAGTTCATACCAAAAATATATATATTGAA  300

seq1  TTTGTTTAAAACTAAAATTAGCATATCTTAGAATTGGGAATGATTAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTAAAACTAAAATTAGCATATCTTAGAATTGGGAATGATTAAAAA  350

seq1  GCTTTGGGAACTCTGTATGTTTTACATTCGCCAATGATACTAGTGCTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGGAACTCTGTATGTTTTACATTCGCCAATGATACTAGTGCTGAT  400

seq1  GAAACATGGTCAAACTTTTCAGATACATTAACTTTAGATATGATTACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATGGTCAAACTTTTCAGATACATTAACTTTAGATATGATTACAAA  450

seq1  AGATAACATACTTAGTGAAAAAGTATAGATCTGGTAATTGGGACTATTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAACATACTTAGTGAAAAAGTATAGATCTGGTAATTGGGACTATTAT  500

seq1  ATATTAAATTATAACTAAATAAATCTAGATTAAAAGAATATAAGCAGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAATTATAACTAAATAAATCTAGATTAAAAGAATATAAGCAGCTA  550

seq1  TCTAATTGAACACAGGGTCCACACAACAGGAAGAAAATCCAGTATTGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTGAACACAGGGTCCACACAACAGGAAGAAAATCCAGTATTGTAT  600

seq1  TAGAAGTGTACTTCTCACCCTAATCTAAGAAATTTCTCTTTACCATAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTGTACTTCTCACCCTAATCTAAGAAATTTCTCTTTACCATAAAT  650

seq1  GGAACCTGTTACAGAAATCCACACTGGGCATAATGCAAAGATCAATATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCTGTTACAGAAATCCACACTGGGCATAATGCAAAGATCAATATAT  700

seq1  CATGCGAAGCCTAGCCTCAATTGATATAATAGCACAACTCCTGCATCCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCGAAGCCTAGCCTCAATTGATATAATAGCACAACTCCTGCATCCAG  750

seq1  TATGAATCAGAATTTCTGGACATCTGCCATGAGACCACCTCTCCTAGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATCAGAATTTCTGGACATCTGCCATGAGACCACCTCTCCTAGTAA  800

seq1  TGCCTGCTTGACCAAATCATGAATAATAAAAGTATCAATAAACATGTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCTTGACCAAATCATGAATAATAAAAGTATCAATAAACATGTTAA  850

seq1  TGTGGAAGGAGAAAAATTGCAGTGTTCCCAACCACAGAAAAAGTACTACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAGGAGAAAAATTGCAGTGTTCCCAACCACAGAAAAAGTACTACA  900

seq1  GGTAGATAATGACTAGTGAGAAAAGGAACATTGATCTCTCTAAGCCCCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGATAATGACTAGTGAGAAAAGGAACATTGATCTCTCTAAGCCCCAT  950

seq1  GATTGACCAATATAAAGTCATCAGTCCTGAAACCACATAAATACAAAACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGACCAATATAAAGTCATCAGTCCTGAAACCACATAAATACAAAACA  1000

seq1  TAAACCTGGATTAAGCATTGTGT  1023
      |||||||||||||||||||||||
seq2  TAAACCTGGATTAAGCATTGTGT  1023