BAC Information

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BAC

Clone NameB6Ng01-042B22
ChromosomeX (Build37)
Map Location 159,919,377 - 160,071,404
singlet/doubletdoublet
Overlap geneGrpr
Upstream geneReps2, LOC654358, LOC100041557, LOC667630, Rbbp7, 4932441K18Rik, LOC671250, Syap1, LOC100041607, Ctps2, S100g, LOC100040610, EG637051
Downstream gene1700045I19Rik, Ap1s2, Zrsr2, Car5b, Siah1b, Tmem27, Ace2, Bmx, Pir, Figf, Piga, Asb11, Asb9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042B22.bB6Ng01-042B22.g
ACCDH868584DH868585
length1,135850
definitionDH868584|Mus musculus domesticus DNA, BAC clone: B6Ng01-042B22, 5' end.DH868585|Mus musculus domesticus DNA, BAC clone: B6Ng01-042B22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(160,070,268 - 160,071,404)(159,919,377 - 159,920,211)
sequence
gaattcctaggaagtgtttaatttagtattctacactatatatattgtta
ttgttactgtgtgggtgggggaaaggcatctaggcatgtgatggtctgag
ttgaccctttcacttttgcataggttctggggaatccagctcaggttctc
ctctggcttgcacagcgggtgtgtttacctgatgggctagctcattggct
ctcgctcacttttaagtaaggaaggccctgaatattgatcaataagattt
agaaaatcaaaggcagatcactaatagttcttccctcctctaagatatag
ccaatcagtcagaatccacactgactttccaggcatacactattgatgga
ttctcctttgtatcagacagcattagttgagttctgaaacattcaaacca
ttataccctggctttctgtgtaaatagcaagaagaattcctaggaagtgt
ttaatttagtattctatactatatatttatattttaatcacaatgtaact
aaattatttatttacaactatgaagactatataattgtgacttggtaata
aaatcctaatattttgacaacattagaactgttattattctagcaagagt
acaaccatactctaatatttatattaaaggacccataattcaactatttt
atttcttgcaattgggaggtcaataaacctaacatactttaaaataggtt
ttctttttgaattctcttcaagccaatcagcctcaagagatgaaaggaca
caggaaacatttcttggaggaacatagtggaagaaaggtcacttatgttt
tcttactgtcaaatgttttattcagctcgaacctgtagcaagtgtaatat
gaaaggttaacttttcttccttgcatgacagcaggaccagctaaaggatg
aaactgtgggagcttctcattcagaaatgctttatcatttcaagatgaca
gccatacacccaaattaagtgtgggacctttcccaactcgaggacttgtg
tgtcttctcaggtcccagaaaaacgtgcctggtaaaattgagcagctcta
caaatgactgagatggagaacagccaagagattcccaaaggaagaccttt
gaaatgggcttaacaaagctcatagccttaggcta
gaattccatcccccatccatggtctcctgactttgcatatatgcggcagc
atgatgtggcaggaggtagtgccttagctggcccacgctgaggcatccac
cctctaccctgaggttccagccatatgacagataggtctagtataaaatg
aagtgtattgagggcatgggaaggggctgtgggaaagaagggtcagagag
ggacagaaaaagagagaagagagaaaaaagggaagaggttggttgagagc
acaggaagaggttgggtaggaacacgtgtgtgtgtgtgggggggggagac
agagacagagacagagagactctcgaatagtctttttatagtgagccagg
cttatatttggctgtttctaggtaactgttgggtggagcctagaagaaag
gggaccacccaagcctttgtaaaatacaaaataaaacttgcaacatatga
acttagcattttatgagtatttctttggaaagacttgataatctaccctc
ttgtattgaagagttaaatctttctgttagaaaaaatgtcatttcttaca
gagaaacacaagtttgtcttatatctacatatcaacctttataatccatt
ccatgaatagataaacatttaaatatattaaactcagtaaggtagaaaaa
atatttgaaaggaattgggtatggattcataatttttaaaaaaattaccc
ccaaagtcttaaaacatcagaaatgggggaggaagtaccatgatatggct
agaacatagaaaaatctaaagaagtcattattttttatatgtgttaacct
aatacaaaatgttacaatcaacatagtctatgaggctaaccctgaatgtc

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_160070268_160071404
seq2: B6Ng01-042B22.b_41_1175 (reverse)

seq1  TAGCCTA--GCTATGAGCTTTGTTAAAGCCCATTTCAAA-GTCTTCCTTT  47
      |||||||  ||||||||||||||| |||||||||||||| ||||||||||
seq2  TAGCCTAAGGCTATGAGCTTTGTT-AAGCCCATTTCAAAGGTCTTCCTTT  49

seq1  GGGAATCCTTCTTGTGCTGTTCT-CATCTCAGTCATTTGTAGAGCTGCTC  96
      |||||||  ||||| |||||||| ||||||||||||||||||||||||||
seq2  GGGAATC--TCTTG-GCTGTTCTCCATCTCAGTCATTTGTAGAGCTGCTC  96

seq1  AATTTTA-CAGGCACGTGTTTCTGGGGACCTGAGGAGACACACAAGTCCT  145
      ||||||| ||||||||| ||||| |||||||||| |||||||||||||||
seq2  AATTTTACCAGGCACGTTTTTCT-GGGACCTGAGAAGACACACAAGTCCT  145

seq1  CGAGTTGGGAAAGGTCCCACACTTAATTTTGGGTTGTATGGCTGTCATCT  195
      |||||||||||||||||||||||||||||  || ||||||||||||||||
seq2  CGAGTTGGGAAAGGTCCCACACTTAATTT--GGGTGTATGGCTGTCATCT  193

seq1  TGAAATGATAAAGCATTTCTGAATGAGAAGCTCCCACAGTTTCATCCTTT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGATAAAGCATTTCTGAATGAGAAGCTCCCACAGTTTCATCCTTT  243

seq1  AGCTGGTCCTGCTGTCATGCAAGGAAGAAAAGTTAACCTTTCATATTACA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGTCCTGCTGTCATGCAAGGAAGAAAAGTTAACCTTTCATATTACA  293

seq1  CTTGCTACAGGTTCGAGCTGAATAAAACATTTGACAGTAAGAAAACATAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTACAGGTTCGAGCTGAATAAAACATTTGACAGTAAGAAAACATAA  343

seq1  GTGACCTTTCTTCCACTATGTTCCTCCAAGAAATGTTTCCTGTGTCCTTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCTTTCTTCCACTATGTTCCTCCAAGAAATGTTTCCTGTGTCCTTT  393

seq1  CATCTCTTGAGGCTGATTGGCTTGAAGAGAATTCAAAAAGAAAACCTATT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTTGAGGCTGATTGGCTTGAAGAGAATTCAAAAAGAAAACCTATT  443

seq1  TTAAAGTATGTTAGGTTTATTGACCTCCCAATTGCAAGAAATAAAATAGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTATGTTAGGTTTATTGACCTCCCAATTGCAAGAAATAAAATAGT  493

seq1  TGAATTATGGGTCCTTTAATATAAATATTAGAGTATGGTTGTACTCTTGC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTATGGGTCCTTTAATATAAATATTAGAGTATGGTTGTACTCTTGC  543

seq1  TAGAATAATAACAGTTCTAATGTTGTCAAAATATTAGGATTTTATTACCA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATAATAACAGTTCTAATGTTGTCAAAATATTAGGATTTTATTACCA  593

seq1  AGTCACAATTATATAGTCTTCATAGTTGTAAATAAATAATTTAGTTACAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACAATTATATAGTCTTCATAGTTGTAAATAAATAATTTAGTTACAT  643

seq1  TGTGATTAAAATATAAATATATAGTATAGAATACTAAATTAAACACTTCC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTAAAATATAAATATATAGTATAGAATACTAAATTAAACACTTCC  693

seq1  TAGGAATTCTTCTTGCTATTTACACAGAAAGCCAGGGTATAATGGTTTGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAATTCTTCTTGCTATTTACACAGAAAGCCAGGGTATAATGGTTTGA  743

seq1  ATGTTTCAGAACTCAACTAATGCTGTCTGATACAAAGGAGAATCCATCAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCAGAACTCAACTAATGCTGTCTGATACAAAGGAGAATCCATCAA  793

seq1  TAGTGTATGCCTGGAAAGTCAGTGTGGATTCTGACTGATTGGCTATATCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTATGCCTGGAAAGTCAGTGTGGATTCTGACTGATTGGCTATATCT  843

seq1  TAGAGGAGGGAAGAACTATTAGTGATCTGCCTTTGATTTTCTAAATCTTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGAGGGAAGAACTATTAGTGATCTGCCTTTGATTTTCTAAATCTTA  893

seq1  TTGATCAATATTCAGGGCCTTCCTTACTTAAAAGTGAGCGAGAGCCAATG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCAATATTCAGGGCCTTCCTTACTTAAAAGTGAGCGAGAGCCAATG  943

seq1  AGCTAGCCCATCAGGTAAACACACCCGCTGTGCAAGCCAGAGGAGAACCT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGCCCATCAGGTAAACACACCCGCTGTGCAAGCCAGAGGAGAACCT  993

seq1  GAGCTGGATTCCCCAGAACCTATGCAAAAGTGAAAGGGTCAACTCAGACC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGATTCCCCAGAACCTATGCAAAAGTGAAAGGGTCAACTCAGACC  1043

seq1  ATCACATGCCTAGATGCCTTTCCCCCACCCACACAGTAACAATAACAATA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATGCCTAGATGCCTTTCCCCCACCCACACAGTAACAATAACAATA  1093

seq1  TATATAGTGTAGAATACTAAATTAAACACTTCCTAGGAATTC  1137
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGTGTAGAATACTAAATTAAACACTTCCTAGGAATTC  1135

seq1: chrX_159919377_159920211
seq2: B6Ng01-042B22.g_62_911

seq1  GAATTCCATCCCCCATCCATGGTCTCCTGACTTTGCATATATGCGGCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCCCCCATCCATGGTCTCCTGACTTTGCATATATGCGGCAGC  50

seq1  ATGATGTGGCAGGAGGTAGTGCCTTAGCTGGCCCACGCTGAGGCATCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTGGCAGGAGGTAGTGCCTTAGCTGGCCCACGCTGAGGCATCCAC  100

seq1  CCTCTACCCTGAGGTTCCAGCCATATGACAGATAGGTCTAGTATAAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACCCTGAGGTTCCAGCCATATGACAGATAGGTCTAGTATAAAATG  150

seq1  AAGTGTATTGAGGGCATGGGAAGGGGCTGTGGGAAAGAAGGGTCAGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTATTGAGGGCATGGGAAGGGGCTGTGGGAAAGAAGGGTCAGAGAG  200

seq1  GGACAGAAAAAGAGAGAAGAGAGAAAAAAGGGAAGAGGTTGGTTGAGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGAAAAAGAGAGAAGAGAGAAAAAAGGGAAGAGGTTGGTTGAGAGC  250

seq1  ACAGGAAGAGGTTGGGTAGGAACACGTGTGTGTGTGTGGGGGGGGGAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAGAGGTTGGGTAGGAACACGTGTGTGTGTGTGGGGGGGGGAGAC  300

seq1  AGAGACAGAGACAGAGAGACTCTCGAATAGTCTTTTTATAGTGAGCCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGAGACAGAGAGACTCTCGAATAGTCTTTTTATAGTGAGCCAGG  350

seq1  CTTATATTTGGCTGTTTCTAGGTAACTGTTGGGTGGAGCCTAGAAGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTTATATTTGGCTGTTTCTAGGTAACTGTTGGGTGGAGCCTAGAAGAAAG  400

seq1  GCTACCACCCAAGCCTTTGTAAAATACAAAATAAAACTTGCAACAAATGA  450
      |  |||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGGACCACCCAAGCCTTTGTAAAATACAAAATAAAACTTGCAACATATGA  450

seq1  ACTTAGCATTTTATGAGTA-TTCTT--GGAAGACTTGATAATCTA-CCTC  496
      ||||||||||||||||||| |||||  | |||||||||||||||| ||||
seq2  ACTTAGCATTTTATGAGTATTTCTTTGGAAAGACTTGATAATCTACCCTC  500

seq1  TTGTATTGAAGAGTTAAATC-TTCTGTTAG-AAAAATGTCATTTCTTACA  544
      |||||||||||||||||||| ||||||||| |||||||||||||||||||
seq2  TTGTATTGAAGAGTTAAATCTTTCTGTTAGAAAAAATGTCATTTCTTACA  550

seq1  GAGAAACACAAGTTTGTCTTAGTATCTACATATCAACCATTATAATCCAT  594
      ||||||||||||||||||||| |||||||||||||||| |||||||||||
seq2  GAGAAACACAAGTTTGTCTTA-TATCTACATATCAACCTTTATAATCCAT  599

seq1  TCCATGAATAGATAAACATTTAAATATATT-AACTCAGTAAGGTAG-AAA  642
      |||||||||||||||||||||||||||||| ||||||||||||||| |||
seq2  TCCATGAATAGATAAACATTTAAATATATTAAACTCAGTAAGGTAGAAAA  649

seq1  AATATTTGAAAGGAATT-GGTAT-GATTCATAATTTT---AAAAATTACC  687
      ||||||||||||||||| ||||| |||||||||||||   ||||||||||
seq2  AATATTTGAAAGGAATTGGGTATGGATTCATAATTTTTAAAAAAATTACC  699

seq1  CCCAAAGTCTTAAAACATCAGAA--TGGGGAGGAAGTACCATGATATGGC  735
      |||||||||||||||||||||||   ||||||||||||||||||||||||
seq2  CCCAAAGTCTTAAAACATCAGAAATGGGGGAGGAAGTACCATGATATGGC  749

seq1  TAGAACATAGAAAAATCTAAAGTAGTCATTATTTTTTATATGTGTTAACC  785
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TAGAACATAGAAAAATCTAAAGAAGTCATTATTTTTTATATGTGTTAACC  799

seq1  TAATACAAAAAGTTACAATAAACATAGTCTATGAGGCT-AGCCTGAATGT  834
      |||||||||| |||||||| |||||||||||||||||| | |||||||||
seq2  TAATACAAAATGTTACAATCAACATAGTCTATGAGGCTAACCCTGAATGT  849

seq1  C  835
      |
seq2  C  850