BAC Information

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BAC

Clone NameB6Ng01-042K12
ChromosomeX (Build37)
Map Location 143,672,006 - 143,672,612
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666730, EG245663, Htr2c
Downstream geneIl13ra2, V1rb10, Lrch2, LOC100039462, LOC666789, LOC434863, EG623995, EG624023, LOC666184, LOC100039511, LOC666812, LOC100039519, LOC434864, EG624096
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042K12.bB6Ng01-042K12.g
ACCDH868964DH868965
length1,2131,134
definitionDH868964|Mus musculus domesticus DNA, BAC clone: B6Ng01-042K12, 5' end.DH868965|Mus musculus domesticus DNA, BAC clone: B6Ng01-042K12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaaaacttttatcatgaatgggtgttgaatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatactagattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcaagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgaat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgcgctttttttggctgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgactcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtataaccttttgtagaaggttctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggctgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttacttttttctagagc
ttttagatgtgttgtcaagctgctagtatgtgctttctcccgtttcttct
tggaggcaatcagagctatgagttccctctagaaatgctttcattgtgtc
ccaaaggtttgggtacgttgtggcttcattttcattaaactataaaaagt
ctttaatttcttctttaatctttctttgaccaggtatcattgagaagatg
tttgttcagttcaccgtgaaatggtggctccatattatgtgtattgagag
atcagcctaggcatggtggttgatagtacatggacaaatccaattttgat
cctgtggagctgt
gaattcttcaaagacatggaaagagcaattctcaaattcatctggaaagg
caaaataaataaataaataaataaaacacaaacaaacaaacaaacagaat
agtgaaaacagctggggtaatcaccatccctgacctcaagctttactatg
aagcaattgtgataaaactgcatggtattggtacagagacagacacattg
atcaatggaatagaattgaagacccagaaataaaaccacatacatatggt
ttacttgatctttgacaaagaagccaaaaatatacaatggaaaaaagaaa
gcaccttcaataaatggtgctggtctaactggatatctgtacgtagaaga
aggaaaatcgacccattgttgggagctactaagacaacactattgtcctg
atctatgaattgggcctcccctcccccctccccagaagaaaagggggtca
aaagcaggtcactgacacaccgctcctagaacaaccacagattgttccag
ccctaagtcagcgccagatgtcctgacctcaagatgtaccctgaccacca
agttcctgcttccccgtgtagtcaccaaaagaaaaatttctgctgcccca
ttcctcctgctgagaagtacttccccttttgcttgtgcatttaagccttg
agccttgctaatacagtgacaccttgatgcttcagaatggttccgtgtag
ttcctctcacttggtgctcgtcttttctctccccacatttggttcttagg
agaaggtcccctcaagaccctcgaataactggacctactggacaggtcaa
cccatatttgtcacctcgtacaaagctcaagtccaggttgatcaagtacc
tcaacataaaaccagatacactgaatctagtagaagagacagtgggaaaa
agccttgaactcattggcacaggaagaatttcctaaacagaaccccaatg
gctcatgctctaagattaagaactgataaatgggacctcatgaaacagga
aagcttctgcaaggcaagggatagtaaagtatgctcagcatcttgcacta
cagcacagcaattaacaattgaaaaatacagggacacatcttcacagcca
gttgaatcaatatgcgtgggggagagggtggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_143672006_143672612
seq2: B6Ng01-042K12.g_594_1201

seq1  CCTCAAGATGTACCCTGACCACCAAGTTCCTGCTTCCCCGTGTAGTCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAGATGTACCCTGACCACCAAGTTCCTGCTTCCCCGTGTAGTCACC  50

seq1  AAAAGAAAAATTTCTGCTGCCCCATTCCTCCTGCTGAGAAGTACTTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAATTTCTGCTGCCCCATTCCTCCTGCTGAGAAGTACTTCCCC  100

seq1  TTTTGCTTGTGCATTTAAGCCTTGAGCCTTGCTAATACAGTGACACCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTTGTGCATTTAAGCCTTGAGCCTTGCTAATACAGTGACACCTTG  150

seq1  ATGCTTCAGAATGGTTCCGTGTAGTTCCTCTCACTTGGTGCTCGTCTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTCAGAATGGTTCCGTGTAGTTCCTCTCACTTGGTGCTCGTCTTTT  200

seq1  CTCTCCCCACATTTGGTTCTTAGGAGAAGGTCCCCTCAAGACCCTCGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCCACATTTGGTTCTTAGGAGAAGGTCCCCTCAAGACCCTCGAAT  250

seq1  AACTGGACCTACTGGACAGGTCAACCCATATTTGTCACCTCGTACAAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGACCTACTGGACAGGTCAACCCATATTTGTCACCTCGTACAAAGC  300

seq1  TCAAGTCCAGGTTGATCAAGTACCTCAACATAAAACCAGATACACTGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTCCAGGTTGATCAAGTACCTCAACATAAAACCAGATACACTGAAT  350

seq1  CTAGTAGAAGAGACAGTGGGAAAAAGCCTTGAACTCATTGGCACAGGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAGAAGAGACAGTGGGAAAAAGCCTTGAACTCATTGGCACAGGAAG  400

seq1  AAATTTCCTAAACAGAACCCCAATGGCTCATGCTCTAAGATTAAGAACTG  450
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AATTTCCTAAACAGAACCCCAATGGCTCATGCTCTAAGATTAAGAACTG  449

seq1  ATAAATGGGACCTCATGAAACAGGAAAGCTTCTGCAAGGCAAGGGATAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGGGACCTCATGAAACAGGAAAGCTTCTGCAAGGCAAGGGATAGT  499

seq1  AAAGTATGCTCAGCATCTTGCACTACCAGCACAGCAATTAACAATTG-AG  549
      ||||||||||||||||||||||||| ||||||||||||||||||||| | 
seq2  AAAGTATGCTCAGCATCTTGCACTA-CAGCACAGCAATTAACAATTGAAA  548

seq1  AATACAGGGACACATCTTCACAGCCAGTTGATACAATATGGCGTGGG---  596
      |||||||||||||||||||||||||||||||  |||||| |||||||   
seq2  AATACAGGGACACATCTTCACAGCCAGTTGAATCAATAT-GCGTGGGGGA  597

seq1  GAGGGTGGGGT  607
      |||||||||||
seq2  GAGGGTGGGGT  608