BAC Information

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BAC

Clone NameB6Ng01-044N03
ChromosomeX (Build37)
Map Location 120,158,896 - 120,258,997
singlet/doubletdoublet
Overlap gene3110007F17Rik
Upstream geneLOC100039544, Nap1l3
Downstream geneLOC100039751, LOC100039763, LOC665281, EG625591, LOC665325, EG382265, LOC665364, EG546368, LOC100038940, LOC100038941, EG625699, LOC100038942
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044N03.bB6Ng01-044N03.g
ACCDH870464DH870465
length1,061514
definitionDH870464|Mus musculus domesticus DNA, BAC clone: B6Ng01-044N03, 5' end.DH870465|Mus musculus domesticus DNA, BAC clone: B6Ng01-044N03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,257,936 - 120,258,997)(120,158,896 - 120,159,415)
sequence
gaattcagagtgagcaaatagacatagtagttcaaactctctaaaatcct
ttctgctaattagaaacacatcaaccaatgacctcatggaatgctaatat
tccattgctacaaacagggaccacatggagatgaaacttttagttgggga
aaccattcagcttaagtgaaattaagtcttctcctcaaggatctaccaac
aattgtatcaaaccttgtatcagtaagaggcaggtactataagacaccta
tatattaacattcagtacaaagaacatggcatcacccagaaagtacattt
tctaaagagctcaaccagagttagttaactgagaagacattgattaaatt
tgttcagcaaaccaaaattattaaaatgtcatgggtaataggcagatggg
gacactacacaaatgtgtgtggtgtgtgtttgtgtttgtgtgtatgatgt
gtacaagtgtgaattataatcctaagaggcagattgtgcaaattagatgc
aaataaaattaaatgatattttctggggtaataacatttccgggaattta
attttaaatgaataattctttctttttagatattttctttatttacattt
caaatgttagcccctttcttagtttcccctccaaaaatcccctattccct
ccccaatccccctactccccaacccacccactctgattcctactcctggc
attcccctgtactgggggcatagagccttcccaagaccaagggcctctcc
ttcctttgatgactgattaggccatcatctgctacatatatagctagagc
cacaagttcaaccatatgttttctttgattgttggtatggttccaaggag
cttgggggtactgattagttcatattgatgttccacctataggggcttca
gacccctcagctcaatgagtatttctctggctccttcattgggacccatg
tgctctgtccatggataattgtgagcatccacttctgtattgccaggcat
tagcagagcctcacaagagacagctatatgaggctcttctcaccagcctc
ctaatggcatc
taggacaaccagggatacacagagaaacacagtcttaaaaaacaaaaaaa
aaaaacaaaaaaaaaacaaaaaaaaaaaaacaaaaagaaacaaaaaaaaa
aaacaaaacaaaacaaaacaaaacaaaacagaaagaaaagtattagagaa
attttggcttcttgtgtattatttttagatgtctataggtttttggaagg
gtttgtagagttttttgaagagtgttttagagtttttttggtttaatgtc
ttcctgtgtatttttagtgttttttcttgttttttggtttgtttgtttgt
ttgttttaagcatcttagtatattttatggtttgggggtttaatttaggc
tttattttaccttttagcattttactgtatttcttagggtttttttggta
gttgttgatcttgattttttttaaaacaattttaggattttatgtttgag
gtttaatttttttatggttgccagacaatgatggcccttgcctttaatcc
cagaatttgggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_120257936_120258997
seq2: B6Ng01-044N03.b_43_1103 (reverse)

seq1  GATGCCAATAAGAGGCTGCTGAGAGGAGCCTCATATAGCTGTCTCTTGTG  50
      ||||||| || ||||||| ||||| |||||||||||||||||||||||||
seq2  GATGCCATTAGGAGGCTGGTGAGAAGAGCCTCATATAGCTGTCTCTTGTG  50

seq1  AGGCTCTGCTAGTGCCTGGCAAATACAGAAGTGGATGCTCACAATTATCC  100
      ||||||||||| |||||||| |||||||||||||||||||||||||||||
seq2  AGGCTCTGCTAATGCCTGGC-AATACAGAAGTGGATGCTCACAATTATCC  99

seq1  ATTGGACAGAGCACATGGGTCCCAATGAAGGAGCCAGAGAAATACTCATT  150
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-TGGACAGAGCACATGGGTCCCAATGAAGGAGCCAGAGAAATACTCATT  148

seq1  GAGCTGGAGGGGTCTGAAG-CCCTATAGGTGGAACATCAATATGAACTAA  199
      ||||| ||||||||||||| ||||||||||||||||||||||||||||||
seq2  GAGCT-GAGGGGTCTGAAGCCCCTATAGGTGGAACATCAATATGAACTAA  197

seq1  TCAGTACCCCCAAGCTCCTTGGAACCATACCAACAATCAAAGAAAACATA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTACCCCCAAGCTCCTTGGAACCATACCAACAATCAAAGAAAACATA  247

seq1  TGGTTGAACTTGTGGCTCTAGCTATATATGTAGCAGATGATGGCCTAATC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGAACTTGTGGCTCTAGCTATATATGTAGCAGATGATGGCCTAATC  297

seq1  AGTCATCAAAGGAAGGAGAGGCCCTTGGTCTTGGGAAGGCTCTATG-CCC  348
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGTCATCAAAGGAAGGAGAGGCCCTTGGTCTTGGGAAGGCTCTATGCCCC  347

seq1  CAGTACAGGGGAATGCCAGGAGTAGGAATCAGAGTGGGTGGGTTGGGGAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACAGGGGAATGCCAGGAGTAGGAATCAGAGTGGGTGGGTTGGGGAG  397

seq1  TAGGGGGATTGGGGAGGGAATAGGGGATTTTTGGAGGGGAAACTAAGAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGGATTGGGGAGGGAATAGGGGATTTTTGGAGGGGAAACTAAGAAA  447

seq1  GGGGCTAACATTTGAAATGTAAATAAAGAAAATATCTAAAAAGAAAGAAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTAACATTTGAAATGTAAATAAAGAAAATATCTAAAAAGAAAGAAT  497

seq1  TATTCATTTAAAATTAAATTCCCGGAAATGTTATTACCCCAGAAAATATC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATTTAAAATTAAATTCCCGGAAATGTTATTACCCCAGAAAATATC  547

seq1  ATTTAATTTTATTTGCATCTAATTTGCACAATCTGCCTCTTAGGATTATA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTTTATTTGCATCTAATTTGCACAATCTGCCTCTTAGGATTATA  597

seq1  ATTCACACTTGTACACATCATACACACAAACACAAACACACACCACACAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACACTTGTACACATCATACACACAAACACAAACACACACCACACAC  647

seq1  ATTTGTGTAGTGTCCCCATCTGCCTATTACCCATGACATTTTAATAATTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGTAGTGTCCCCATCTGCCTATTACCCATGACATTTTAATAATTT  697

seq1  TGGTTTGCTGAACAAATTTAATCAATGTCTTCTCAGTTAACTAACTCTGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGCTGAACAAATTTAATCAATGTCTTCTCAGTTAACTAACTCTGG  747

seq1  TTGAGCTCTTTAGAAAATGTACTTTCTGGGTGATGCCATGTTCTTTGTAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTCTTTAGAAAATGTACTTTCTGGGTGATGCCATGTTCTTTGTAC  797

seq1  TGAATGTTAATATATAGGTGTCTTATAGTACCTGCCTCTTACTGATACAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTTAATATATAGGTGTCTTATAGTACCTGCCTCTTACTGATACAA  847

seq1  GGTTTGATACAATTGTTGGTAGATCCTTGAGGAGAAGACTTAATTTCACT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGATACAATTGTTGGTAGATCCTTGAGGAGAAGACTTAATTTCACT  897

seq1  TAAGCTGAATGGTTTCCCCAACTAAAAGTTTCATCTCCATGTGGTCCCTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGAATGGTTTCCCCAACTAAAAGTTTCATCTCCATGTGGTCCCTG  947

seq1  TTTGTAGCAATGGAATATTAGCATTCCATGAGGTCATTGGTTGATGTGTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGCAATGGAATATTAGCATTCCATGAGGTCATTGGTTGATGTGTT  997

seq1  TCTAATTAGCAGAAAGGATTTTAGAGAGTTTGAACTACTATGTCTATTTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTAGCAGAAAGGATTTTAGAGAGTTTGAACTACTATGTCTATTTG  1047

seq1  CTCACTCTGAATTC  1062
      ||||||||||||||
seq2  CTCACTCTGAATTC  1061

seq1: chrX_120158896_120159415
seq2: B6Ng01-044N03.g_67_586

seq1  GAATTCTAGGACAACCAGGGATACACAGAGAAACACAGTCTTAAAAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGACAACCAGGGATACACAGAGAAACACAGTCTTAAAAAACA  50

seq1  AAAAAAAAAAACAAAAAAAAAACAAAAAAAAAAAAACAAAAAGAAACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAACAAAAAAAAAACAAAAAAAAAAAAACAAAAAGAAACAAA  100

seq1  AAAAAAAAACAAAACAAAACAAAACAAAACAAAACAGAAAGAAAAGTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAACAAAACAAAACAAAACAAAACAAAACAGAAAGAAAAGTATT  150

seq1  AGAGAAATTTTGGCTTCTTGTGTATTATTTTTAGATGTCTATAGGTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAATTTTGGCTTCTTGTGTATTATTTTTAGATGTCTATAGGTTTTT  200

seq1  GGAAGGGTTTGTAGAGTTTTTTGAAGAGTGTTTTAGAGTTTTTTTGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGTTTGTAGAGTTTTTTGAAGAGTGTTTTAGAGTTTTTTTGGTTT  250

seq1  AATGTCTTCCTGTGTATTTTTAGTGTTTTTTCTTGTTTTTTGGTTTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTTCCTGTGTATTTTTAGTGTTTTTTCTTGTTTTTTGGTTTGTTT  300

seq1  GTTTGTTTGTTTTAAGCATCTTAGTATATTTTATGGTTTGGGGGTTTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGTTTTAAGCATCTTAGTATATTTTATGGTTTGGGGGTTTAAT  350

seq1  TTAGGCTTTATTTTACCTTTTAGCATTTTACTGTATTTCTTAGGGTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCTTTATTTTACCTTTTAGCATTTTACTGTATTTCTTAGGGTTTTT  400

seq1  TTGGTAGTTGTTGATCTTGATTTTTTTTAAAACAATTTTAGGATTTTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAGTTGTTGATCTTGATTTTTTTTAAAACAATTTTAGGATTTTATG  450

seq1  TTTGAGGTTTAATTGTTTTATGGTTGCCAGACAATGATGGCCCTTGCCTT  500
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTTGAGGTTTAATTTTTTTATGGTTGCCAGACAATGATGGCCCTTGCCTT  500

seq1  TAATCCCAGAACTTGGGAGG  520
      ||||||||||| ||||||||
seq2  TAATCCCAGAATTTGGGAGG  520