BAC Information

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BAC

Clone NameB6Ng01-044P12
ChromosomeX (Build37)
Map Location 81,330,608 - 81,331,615
singlet/doubletsinglet
Overlap geneDmd
Upstream geneTsga8
Downstream geneLOC100042306, LOC100042296
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044P12.bB6Ng01-044P12.g
ACCDH870567DH870568
length7271,027
definitionDH870567|Mus musculus domesticus DNA, BAC clone: B6Ng01-044P12, 5' end.DH870568|Mus musculus domesticus DNA, BAC clone: B6Ng01-044P12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgcttgcatattaactaaagtttaaagcaaaattgctacact
acaacactcaattaggtgctaaacacttttcccagaagggtcagcatcca
tagtcaaagaaaaaaattctatttacttttcaaatgtgattttgccgcta
ttttttgtttcctttaatggcacttgaagtggaaacttaaggcttctttg
gaaagtcagttgtgttggatggtggtttgttgaagcacacaggtgaagga
acattttattaaagtgaacacaggtgtgaaagactaaggccgactcgtga
agtatttgtaaatggatttaactatgctacctgctaacctgtgaattgct
gatttccaggcaacacagatgggatttgctccaaagaacctttctaaaca
agtccatttccccgtatcctttcttttccaccatctctggtgggtggtgg
ctaaaggggggttaaagcatttaagaaccatcatttgctatatatgcagc
tggagtcataagtccctccatgtgtactctttggttggtggtttaatccc
tggtagctctgggggtactggttggatcatattgttgttcttccaatggg
gccgcaggctccttcagccccttcggtcctttctctagctcctccattgg
ggttggtcctgagaaatctcgatgccccagtttaggtgaatcccaagaca
gagaagtgggagtgggtgggttggtga
gaattcattcccaaattctctaagtatgtaatatcacttaagctatttaa
agtaagagagacatatgttcacagttaatgaagtgacagtggaatatgct
acagagcaagacaagtggggattttaatcataatgataaagaaagtaata
atgatgatgatgatgatgataaaataggagcaggagatgttgttgttact
cttcataacagaaaaggtgatgcaaactattttatttggggtttaatggt
tcttggcattcagttcatattcagtgattgttttagttcatcttaacatc
ccttttgaggtgtagatgccatcatgatgaaaagagttctttttaacagc
aagccttctgaggtgtagatatcactatgatgtgcagaataaggcctgga
aagatttatagcaactcgaattgaccatgattggtattgtatctggtttc
catgcttgtttcagagattgtccagctctaaggcatgggcagtacttgat
gtcttatatttctttcatttgtatgcttgggatgccacatatcatacaat
attattttcacaattatttagcttgcagtgaataaaacatcaatgctttt
aaacatgaaagatgtgcaacttcattaccagactgtgtgaaatatagatg
taaaactacatgtgtcagactgtgaaatagtaaaatcacaagtatagtaa
gataattaatactattatattacaatgtgccttgattagttaacttatta
ctcatagaatttccataaattgagtactatttctatcctatttatgtatt
taataaaaatgaaggcagcaaatttgaataattctcaaaatatgacatgt
atacctatatctataaatggctatgtgtatgtctacttgtacatccttcc
aaccatctaaacagttctctcagtgtgtgtgtctctctctgccctctctc
tttctctctttgcccttccttccctccctccctcctccctccctctgtct
ctcatctcttagtcctccctatctttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_81330608_81331615
seq2: B6Ng01-044P12.g_69_1075

seq1  GAATTCATTCCCAAATTCTCTAAGTATGTAATATCACTTAAGCTATTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCCCAAATTCTCTAAGTATGTAATATCACTTAAGCTATTTAA  50

seq1  AGTAAGAGAGACATATGTTCACAGTTAATGAAGTGACAGTGGAATATGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGAGAGACATATGTTCACAGTTAATGAAGTGACAGTGGAATATGCT  100

seq1  ACAGAGCAAGACAAGTGGGGATTTTAATCATAATGATAAAGAAAGTAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCAAGACAAGTGGGGATTTTAATCATAATGATAAAGAAAGTAATA  150

seq1  ATGATGATGATGATGATGATAAAATAGGAGCAGGAGATGTTGTTGTTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGATGATGATGATGATAAAATAGGAGCAGGAGATGTTGTTGTTACT  200

seq1  CTTCATAACAGAAAAGGTGATGCAAACTATTTTATTTGGGGTTTAATGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAACAGAAAAGGTGATGCAAACTATTTTATTTGGGGTTTAATGGT  250

seq1  TCTTGGCATTCAGTTCATATTCAGTGATTGTTTTAGTTCATCTTAACATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGCATTCAGTTCATATTCAGTGATTGTTTTAGTTCATCTTAACATC  300

seq1  CCTTTTGAGGTGTAGATGCCATCATGATGAAAAGAGTTCTTTTTAACAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTGAGGTGTAGATGCCATCATGATGAAAAGAGTTCTTTTTAACAGC  350

seq1  AAGCCTTCTGAGGTGTAGATATCACTATGATGTGCAGAATAAGGCCTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTCTGAGGTGTAGATATCACTATGATGTGCAGAATAAGGCCTGGA  400

seq1  AAGATTTATAGCAACTCGAATTGACCATGATTGGTATTGTATCTGGTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTATAGCAACTCGAATTGACCATGATTGGTATTGTATCTGGTTTC  450

seq1  CATGCTTGTTTCAGAGATTGTCCAGCTCTAAGGCATGGGCAGTACTTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTGTTTCAGAGATTGTCCAGCTCTAAGGCATGGGCAGTACTTGAT  500

seq1  GTCTTATATTTCTTTCATTTGTATGCTTGGGATGCCACATATCATACAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTATATTTCTTTCATTTGTATGCTTGGGATGCCACATATCATACAAT  550

seq1  ATTATTTTCACAATTATTTAGCTTGCAGTGAATAAAACATCAATGCTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTCACAATTATTTAGCTTGCAGTGAATAAAACATCAATGCTTTT  600

seq1  AAACATGAAAGATGTGCAACTTCATTACCAGACTGTGTGAAATATAGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGAAAGATGTGCAACTTCATTACCAGACTGTGTGAAATATAGATG  650

seq1  TAAAACTACATGTGTCAGACTGTGAAATAGTAAAATCACAAGTATAGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTACATGTGTCAGACTGTGAAATAGTAAAATCACAAGTATAGTAA  700

seq1  GATAATTAATACTATTATATTACAATGTGCCTTGATTAGTTAACTTATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTAATACTATTATATTACAATGTGCCTTGATTAGTTAACTTATTA  750

seq1  CTCATAGAATTTCCATAAATTGAGTACTATTTCTATCCTA-TTATGTATT  799
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTCATAGAATTTCCATAAATTGAGTACTATTTCTATCCTATTTATGTATT  800

seq1  TAATAAAAATGAAGGCAGCAAATTTGAATAATTCTCAAAATATGACATGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAAATGAAGGCAGCAAATTTGAATAATTCTCAAAATATGACATGT  850

seq1  ATACCTATATCTATAAATGGCTATGTGTATGTCTACTTGTACATCCTTCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTATATCTATAAATGGCTATGTGTATGTCTACTTGTACATCCTTCC  900

seq1  AACCATCTAAACAGTTCTCTCAGTGTGTGTGTCTCTCTCTGCCCCTCTCT  949
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AACCATCTAAACAGTTCTCTCAGTGTGTGTGTCTCTCTCTG-CCCTCTCT  949

seq1  CTTTCTCTCTTTGCCCTTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTGT  999
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTTTCTCTCTTTGCCCTTCCTTCCCTCCCTCCCT-CCTCCCTCCCTCTGT  998

seq1  CTCTCATCT  1008
      |||||||||
seq2  CTCTCATCT  1007