MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-046G10
Chromosome	X (Build37)
Map Location	142,780,601 - 142,781,636
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Lhfpl1, Amot, EG434860, LOC100039313, LOC623697, LOC623731, LOC237096, LOC100039558
Downstream gene	EG666730, EG245663, Htr2c
Link	Open Mouse BAC browser

Click to get alignment info.

name	Lhfpl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237091 MGI:1891214
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Amot (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27494 MGI:108440
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG434860 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434860 MGI:3646381
definition	note : predicted gene, EG434860 pseudo : _no_value

name	LOC100039313 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039313
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC623697 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623697
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	LOC623731 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623731
definition	note : ribosomal RNA processing 15 homolog (S. cerevisiae) pseudogene pseudo : _no_value

name	LOC237096 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:237096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC100039558 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039558
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 293 ESTs, 27 Proteins pseudo : _no_value

name	EG666730 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666730 MGI:3647364
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 86 ESTs, 4 Proteins pseudo : _no_value

name	EG245663 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245663 MGI:3646769
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins pseudo : _no_value

name	Htr2c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15560 MGI:96281
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lhfpl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328432 GeneID:237091 MGI:1891214
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lipoma HMGIC fusion partner-like 1 transcript_id : NM_178358.3

name	Amot (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125346195 GeneID:27494 MGI:108440
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : angiomotin transcript_id : NM_153319.2

name	Htr2c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373665 GeneID:15560 MGI:96281
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5-hydroxytryptamine (serotonin) receptor 2C transcript_id : NM_008312.3

name	Amot (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125346196 GeneID:27494 MGI:108440
definition	GO_component : GO:0005884 - actin filament [Evidence ISS]; GO:0031410 - cytoplasmic vesicle [Evidence ISS]; GO:0030139 - endocytic vesicle [Evidence ISS]; GO:0009897 - external side of plasma membrane [Evidence ISS]; GO:0030027 - lamellipodium [Evidence ISS] [Evidence IDA]; GO:0001726 - ruffle [Evidence ISS] GO_function : GO:0043532 - angiostatin binding [Evidence ISS]; GO:0004872 - receptor activity [Evidence ISS] GO_process : GO:0042074 - cell migration involved in gastrulation [Evidence IMP]; GO:0006935 - chemotaxis [Evidence IMP]; GO:0001701 - embryonic development (sensu Mammalia) [Evidence IMP]; GO:0010003 - gastrulation (sensu Mammalia) [Evidence IMP]; GO:0016525 - negative regulation of angiogenesis [Evidence ISS]; GO:0045766 - positive regulation of angiogenesis [Evidence ISS]; GO:0043536 - positive regulation of blood vessel endothelial cell migration [Evidence ISS]; GO:0040019 - positive regulation of embryonic development [Evidence IMP]; GO:0030334 - regulation of cell migration [Evidence ISS]; GO:0001570 - vasculogenesis [Evidence IMP] codon_start : 1 product : angiomotin protein_id : NP_695231.2

name	Htr2c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542977 CCDS:CCDS30459.1 GeneID:15560 MGI:96281
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004993 - serotonin receptor activity [Evidence ISS]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0048016 - inositol phosphate-mediated signaling [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : 5-HT2C receptor; snoRNA MBI-36 product : 5-hydroxytryptamine (serotonin) receptor 2C protein_id : NP_032338.2

name	LOC100039313 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039313
definition	number : 1 pseudo : _no_value

name	LOC100039313 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039313
definition	number : 2 pseudo : _no_value

name	LOC100039313 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039313
definition	number : 3 pseudo : _no_value

name	LOC623697 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623697
definition	number : 1 pseudo : _no_value

name	LOC237096 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:237096
definition	number : 1 pseudo : _no_value

name	EG245663 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:245663
definition	number : 1 pseudo : _no_value

name	EG245663 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:245663
definition	number : 2 pseudo : _no_value

name	LOC100039558 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272428 GeneID:100039558
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 293 ESTs, 27 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_030948.1

name	EG666730 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149272429 GeneID:666730 MGI:3647364
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 86 ESTs, 4 Proteins product : predicted gene, EG666730 pseudo : _no_value transcript_id : XR_001912.2

clone name	MSMg01-370N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082F03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-081I18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-542I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159E17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-360F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157L09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-366B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080M22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-209C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175M06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-090H04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-081E04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-328P16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-350H24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-356A02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-361E24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-416F21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-346B20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-506I17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-527N13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-509F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329I24
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-046G10.b	B6Ng01-046G10.g
ACC	DH871578	DH871579
length	964	1,105
definition	DH871578\|Mus musculus domesticus DNA, BAC clone: B6Ng01-046G10, 5' end.	DH871579\|Mus musculus domesticus DNA, BAC clone: B6Ng01-046G10, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcactatgtattatcaagtaacctgaagctttactgtgttccaaac ataggacttactctgtttggacctactccatattagactttttaaattca atttttaaaattaataaaatcataatacattttctgcataatcaccatcc ttccaaatagagattagtagagtcactgtaggcagatttcaaaaaaatga tgaaacaaatacaaaatactagaaatattttgcaagtcaacattgtttgg tgagcgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctgtctgtctgtctg tctttctatgtctgcatgcgtgtgttttacctaaaatataagtcaaataa ttgcacttaacatcttgtctataatttttgcaatagcactatttgtttga cagtggcttatttctagaaatcttttttctttctttttctttttttcatt ttttcatttttttattagatattttctttatatacatttcaaattttaaa tgctatcccgaaagttccctatacactcccctcgccatgctcccctaccc acccactcctgcttcttggacctggtattccgctgtactggggtatataa agtttgcaataccaaggggcctctcttcccagtgatggtcgactaggcca tcttctgctacatatgcagctagagacacgagttctgggggtactggtaa gtccatattgttgttccacctatgggttgcagacccctttagctccttgg gtgctttctctagcttctccactgaggggcctgggttccatccaatgggt gtctgtgagcatccacttctgtatttgccaggaactggcatagcctcaca gtgaagctatatcaggtcctttcagcataatcttgctggcatatgcaata gtgtctgtgtttgtggctgattagggatggatctcaaagaggcaatccta gatggtccatcctc	gaattcctaaattcatacaagtaatttttgaggcctttatagtgtgaaag ctgtaattagggctctgcaaactttcatgtgtcacaggctaattgcatta ggataagaaagcaggcttggaacaaatttaggatgagggaaaccattcct tctaagctggctgtgaaaccattatctgataactaaaggttataaactgt ggaaaggcaatttatggtagatggaaggtcaaaaaataaaataattgact ggattcacctatacaaaacttcaaaactaataagacacatagtagataat tccccatttgacaaaaccatgctgacttgtaacataaaaattattgcttt aaagttttaatgagcttatagagctagaaaacaaatgatcaatgtttagt taggtactgatcttaatgaaaacacatgtaaacatttctgctgtaactca tttgatttatgatttgaatttatgtatcaaacttgctataaactcttaga atgtaatgatgcttggaaaaccatatgatatttatcctgagaaagtataa gaactaagaatgacaataaaagagagggttttttttttctttcaataata aagaggaagaatttttttctttctttcaccaatagagagtcggggctttt gtctaccttaggggccttttattactttcagcaataaaaagatttttctg ggtatttctctggtcaataaaggttggagcttctttttcattcagaatga atgagttctttctgttctggcccttgctcaatggaaatttttcatgagtg cttttgcaccattcactaaatgtgtacttgtatgtatatgtgtatatgta tgcatatatgtatgcatatgcttatggcttatataagtatagtgtgtata catataactatgtatggacacttgtagatttgatgagacaggttgtaggg catgaccagaatgtgttgtgattttgtgcatattgtctgtgtaaaaaatc attttttttctttactctttagctcccaagaaggtatgagtttctgcctt tgattggcagcataagtccttactgagagatagatcagttctatttaagg cacaa
quality values	Open. Hide. 47 41 22 30 57 26 22 57 61 61 42 42 61 61 37 61 61 43 31 37 47 47 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 49 40 61 61 61 61 61 61 59 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 55 55 61 61 61 61 61 59 59 61 55 55 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 52 61 61 61 55 61 61 61 61 61 61 61 61 61 55 61 61 61 61 52 49 61 61 61 61 61 61 61 61 50 61 61 55 61 61 55 61 61 61 50 61 61 61 61 61 61 61 61 50 61 61 61 50 61 61 61 61 61 50 61 61 61 61 61 61 55 49 61 61 61 61 61 61 61 35 61 61 61 61 61 61 61 61 47 53 61 43 61 45 61 52 61 61 61 52 53 61 61 53 50 52 53 53 61 50 61 61 61 43 39 61 61 45 61 61 47 53 61 61 50 61 47 53 53 50 45 61 61 50 61 61 61 45 45 61 31 61 61 53 61 53 53 47 53 61 53 45 47 47 57 57 52 45 50 52 45 53 57 42 53 45 47 38 57 47 50 45 57 53 40 45 57 53 42 52 57 42 47 47 57 50 53 52 34 38 53 57 53 47 16 47 52 53 57 42 45 40 47 30 44 38 38 53 53 45 45 33 52 53 57 57 57 38 52 36 40 45 36 47 47 45 34 57 57 52 37 42 53 37 50 27 47 28 53 9 57 46 43 45 50 37 45 40 52 50 33 23 21 19 17 12 24 53 38 28 53 53 23 50 38 50 36 40 33 14 34 31 47 37 40 33 29 57 39 38 42 35 38 38 37 34 50 52 52 50 36 38 22 37 40 33 37 53 35 37 36 27 36 33 52 23 14 23 35 36 40 39 37 37 31 29 23 17 30 52 52 40 57 53 33 41 37 34 33 29 30 30 27 30 11 24 33 22 35 37 31 20 40 41 33 33 25 33 57 53 22 29 29 29 24 16 47 24 33 39 32 27 46 43 30 15 34 29 35 48 13 44 30 30 40 27 23 29 36 51 48 43 32 30 32 48 28 44 29 29 48 29 23 30 29 27 29 29 18 18 37 47 29 29 29 25 29 45 45 20 31 35 35 22 39 28 33 24 26 29 29 31 29 29 31 15 29 29 36 21 27 43 19 38 34 31 35 30 18 29 29 33 35 20 41 23 35 31 38 33 23 29 24 23 16 28 29 24 28 28 43 29 26 25 26 31 13 30 23 28 29 20 14 9 13 17 13 15 13 7 20 29 29 29 17 17 22 7 11 14 10 20 18 16 36 23 28 24 19 30 15 14 30 32 20 25 13 32 18 14 41 31 34 24 22 21 20 11 9 11 22 14 17 23 5 5 18 10 9 10 14 6 8 10 38 18 32 8 34 30 12 22 20 29 17 8 8 7 12 8 7 5 38 12 25 12 16 23 11 4 5 24 9 20 11 17 8 12 6 7 5 5 8 8 25 32 8 17 27 12 14 14 7 10 22 10 7 5	Open. Hide. 61 47 43 47 61 61 50 49 43 49 43 34 52 43 37 52 52 61 55 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 34 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 55 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 53 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 43 61 61 61 53 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 57 53 53 52 53 53 47 57 53 57 53 57 50 57 52 57 57 57 53 57 57 53 53 57 47 47 57 57 57 53 57 57 53 53 57 57 57 57 47 57 57 57 57 57 47 57 57 45 53 57 53 40 57 57 53 53 57 53 57 53 47 53 57 53 53 53 53 45 37 57 53 53 57 57 57 53 53 50 52 57 57 57 53 53 45 53 53 36 57 57 39 52 33 53 53 47 57 52 37 57 50 53 57 57 47 57 57 43 35 37 57 50 53 50 52 43 46 33 50 50 57 46 52 50 43 43 45 53 57 30 52 57 57 38 41 43 53 38 57 50 57 37 46 50 50 57 37 57 46 36 57 52 39 20 38 38 24 42 42 57 37 57 37 53 38 57 47 21 57 57 57 41 57 57 57 57 57 42 42 57 53 33 14 43 33 37 40 40 37 57 52 29 52 32 33 37 34 20 57 31 28 57 57 57 57 57 37 37 29 57 47 42 33 57 40 37 26 37 35 12 47 44 48 37 53 35 53 30 40 43 22 44 57 53 31 35 53 57 53 53 33 37 33 33 30 21 32 41 40 15 57 53 33 26 35 28 47 57 37 24 21 29 30 30 29 46 31 30 29 27 40 30 29 30 36 51 51 51 47 29 29 16 51 51 51 30 44 34 46 46 45 29 29 30 51 32 35 38 32 32 30 45 23 33 28 36 30 29 51 29 24 29 12 31 37 29 48 26 29 28 39 41 31 51 46 51 29 35 29 28 29 37 28 11 43 29 27 29 27 29 32 33 43 23 30 32 33 32 51 28 33 29 30 23 28 38 28 36 29 16 39 36 29 28 30 28 35 35 20 32 20 37 29 39 51 29 29 51 46 46 27 28 29 28 28 38 20 29 29 25 27 46 46 32 20 28 18 26 28 27 34 41 28 17 33 34 35 51 29 29 34 12 19 17 23 31 21 21 23 18 29 23 35 28 28 19 18 20 29 20 31 19 35 27 24 19 28 21 15 10 21 34 23 22 22 21 21 18 29 22 28 23 23 34 19 29 22 16 25 28 21 17 14 13 18 20 22 31 14 26 13 17 18 15 30 15 24 27 25 11 8 9 29 15 22 13 21 19 20 34 21 31 34 21 6 28 24 27 28 15 21 20 11 6 16 18 25 17 10 18 22 19 32 14 17 13 34 16 35 28 26 30 13 15 32 8 10 12 12 15 16 20 13 33 15 26 15 42 27 19 20 17 31 31 16 16 12 15 22 30 12 15 7 16 6 6 17 19 15 22 7 6 5 5 12 7 16 13 9 14 14 12 10 16 8 10 8 10 7 6 15 23 42 36 36 42 22 7 7 20 30 37 42 36 36 42 42 14 5 4 17 19 8 10 13 9 4 4 6 11 4 9 7 9 4 6 6 4 6 23 23 9 7 15 4 4 6 16 10 20 18 5 5 24 10 11 6 7 6 4 9 11 4 3 2 3 15 6 11 19 10 3 4 8 27 9 9 6 7 9 2 5 23 23 9 5 7 8 24 19 3 4 4 4 5 4 4 6 5 5 4 8 6 14 10 5 8 12 15 13 5 8 15 15

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_142780601_142781636
seq2: B6Ng01-046G10.g_146_1168

seq1  CACAGGCTAATTGCATTAGGATAAGAAAGCAGGCTTGGAACAAATTTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGCTAATTGCATTAGGATAAGAAAGCAGGCTTGGAACAAATTTAGG  50

seq1  ATGAGGGAAACCATTCCTTCTAAGCTGGCTGTGAAACCATTATCTGATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGGAAACCATTCCTTCTAAGCTGGCTGTGAAACCATTATCTGATAA  100

seq1  CTAAAGGTTATAAACTGTGGAAAGGCAATTTATGGTAGATGGAAGGTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGGTTATAAACTGTGGAAAGGCAATTTATGGTAGATGGAAGGTCAA  150

seq1  AAAATAAAATAATTGACTGGATTCACCTATACAAAACTTCAAAACTAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAATAATTGACTGGATTCACCTATACAAAACTTCAAAACTAATA  200

seq1  AGACACATAGTAGATAATTCCCCATTTGACAAAACCATGCTGACTTGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACATAGTAGATAATTCCCCATTTGACAAAACCATGCTGACTTGTAA  250

seq1  CATAAAAATTATTGCTTTAAAGTTTTAATGAGCTTATAGAGCTAGAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAAATTATTGCTTTAAAGTTTTAATGAGCTTATAGAGCTAGAAAAC  300

seq1  AAATGATCAATGTTTAGTTAGGTACTGATCTTAATGAAAACACATGTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATCAATGTTTAGTTAGGTACTGATCTTAATGAAAACACATGTAAA  350

seq1  CATTTCTGCTGTAACTCATTTGATTTATGATTTGAATTTATGTATCAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTGCTGTAACTCATTTGATTTATGATTTGAATTTATGTATCAAAC  400

seq1  TTGCTATAAACTCTTAGAATGTAATGATGCTTGGAAAACCATATGATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATAAACTCTTAGAATGTAATGATGCTTGGAAAACCATATGATATT  450

seq1  TATCCTGAGAAAGTATAAGAACTAAGAATGACAATAAAAGAGAGGGTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGAGAAAGTATAAGAACTAAGAATGACAATAAAAGAGAGGGTTTT  500

seq1  TTTTTTCTTTCAATAATAAAGAGGAAGAATTTTTTTCTTTCTTTCACCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTTCAATAATAAAGAGGAAGAATTTTTTTCTTTCTTTCACCAA  550

seq1  TAGAGAGTCGGGGCTTTTGTCTACCTTAGGGGCCTTTTATTACTTTCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAGTCGGGGCTTTTGTCTACCTTAGGGGCCTTTTATTACTTTCAGC  600

seq1  AATAAAAAGATTTTTCTGGGTATTTCTCTGGTCAATAAAGGTTGGAGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAAGATTTTTCTGGGTATTTCTCTGGTCAATAAAGGTTGGAGCTT  650

seq1  CTTTTTCATTCAGAATGAATGAGTTCTTTCTGTTCTGGCCCTTGCTCAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCATTCAGAATGAATGAGTTCTTTCTGTTCTGGCCCTTGCTCAAT  700

seq1  GGAAATTTTTCATGAGTGCTTTTGCACCATTCACTAAATGTGTACTTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTTTTCATGAGTGCTTTTGCACCATTCACTAAATGTGTACTTGTA  750

seq1  TGTATATGTGTATATGTATGCATATATGTATGCATATGCTTATGGCTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATGTGTATATGTATGCATATATGTATGCATATGCTTATGGCTTAT  800

seq1  ATAAGTATAGGTGTGTATACATATAACTATGTATGGACACTTGTAGATTT  850
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTATA-GTGTGTATACATATAACTATGTATGGACACTTGTAGATTT  849

seq1  GATGAGACAGGTTGTAGGGCATGACCAGAATGTG-TGTGAATCTGTGCAT  899
      |||||||||||||||||||||||||||||||||| ||||| | |||||||
seq2  GATGAGACAGGTTGTAGGGCATGACCAGAATGTGTTGTGATTTTGTGCAT  899

seq1  ATTGTCTGTGTAAAAAAATTCATTTTTTTTCTTTACTCTCTAGCTCACAA  949
      |||||||||||||||||  |||||||||||||||||||| |||||| |||
seq2  ATTGTCTGTGTAAAAAA--TCATTTTTTTTCTTTACTCTTTAGCTCCCAA  947

seq1  GAAGTTAATGAGTTTCTTGCCTCTGATCTGGCCAGCAATAGGTCTTTAAC  999
      |||| | ||||||||| ||||| |||| ||| |||| ||| ||| || ||
seq2  GAAGGT-ATGAGTTTC-TGCCTTTGAT-TGG-CAGC-ATAAGTCCTT-AC  991

seq1  TGAGAGATATAGGAAATCAGTACATATTAAGGCACAA  1036
      ||||||||     | |||||| |   |||||||||||
seq2  TGAGAGAT-----AGATCAGTTCTATTTAAGGCACAA  1023

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information