BAC Information

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BAC

Clone NameB6Ng01-046K11
ChromosomeX (Build37)
Map Location 102,146,040 - 102,265,538
singlet/doubletdoublet
Overlap geneLOC676331, 5530601H04Rik
Upstream geneRnf12, C77370, Vcp-ps, EG621542, Uprt, Zdhhc15, Magee2, LOC622098
Downstream gene2610029G23Rik, Magee1, LOC622159, LOC668454, E530001F21Rik, LOC622202, LOC100043213, LOC668458, Cypt2, EG633570, Fgf16, Atrx, 2610529C04Rik, Cox7b, Atp7a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046K11.bB6Ng01-046K11.g
ACCDH871750DH871751
length263816
definitionDH871750|Mus musculus domesticus DNA, BAC clone: B6Ng01-046K11, 5' end.DH871751|Mus musculus domesticus DNA, BAC clone: B6Ng01-046K11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,265,276 - 102,265,538)(102,146,040 - 102,146,851)
sequence
caattgattgacacctagtttcttcaaattagagtctggaaaccatggca
gcagcaggaagttccggctgttttaaagtcgcggttccggtgttcaggat
gccagggatgatgggaagcctgttcttgtttatcggtttgtacggaactt
cacccgcggtagagtacggcctgagaattttgttccagcaccggtgtgag
gtggctgcctttatcgatggaaatgaaacccggggctggggctgggggat
gaggggggagcgg
gaattcactgaaattgtgaatcaagatacagttttctttccataagttgt
ttgtttaatgggagggagtagagatgggggtatatatgggacgagctata
aggaatagtcagatgaatatgatgaaaatacattgtatgcatggtaatat
tcaaagactaaataagtttattaaaatgggtgaaaactccaataaagttg
tccaaagatatgtgaaatttgtatggagtaggctcaagaaaaactgggta
taaaaaataagagaaataaaaaaaatacacaattgttgataatctttagt
ataagagtaaacagaagggatgatatactagatgggggttttcaggtaac
attccatttttgttttgctttattttaatatgtgatgctttgtagaaagt
ttatgtaccagtgggaatcactcagaagagaagagtaactttgtggaaga
aaacagcaggatcactgctagggctatgcactgactggatttttttaaaa
ggttttggaataaactgatacaagtctgggttttgacaggagtatggata
gttatccaaagtgatgagaaggcaagcagagtatttactcagatgtaggt
aggcaggaagtttccttgacttctacgtcatcacaaaggatgaagcgttc
tgagtattggatgctttgtggagaacagatggatttgagatgtaatgtac
actgtgaatgagttgtctaatcaggaaatggtatgtaactattggacata
cactttaaagagtttatgtttgcttcacatattccggtgttgtgattttg
aagtggggggggtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_102265276_102265538
seq2: B6Ng01-046K11.b_53_315 (reverse)

seq1  CCGCTCCCCCCTCATCCCCCAGCCCCAGCCCCGGGTTTCATTTCCATCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTCCCCCCTCATCCCCCAGCCCCAGCCCCGGGTTTCATTTCCATCGA  50

seq1  TAAAGGCAGCCACCTCACACCGGTGCTGGAACAAAATTCTCAGGCCGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGCAGCCACCTCACACCGGTGCTGGAACAAAATTCTCAGGCCGTAC  100

seq1  TCTACCGCGGGTGAAGTTCCGTACAAACCGATAAACAAGAACAGGCTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCGCGGGTGAAGTTCCGTACAAACCGATAAACAAGAACAGGCTTCC  150

seq1  CATCATCCCTGGCATCCTGAACACCGGAACCGCGACTTTAAAACAGCCGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCCCTGGCATCCTGAACACCGGAACCGCGACTTTAAAACAGCCGG  200

seq1  AACTTCCTGCTGCTGCCATGGTTTCCAGACTCTAATTTGAAGAAACTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCCTGCTGCTGCCATGGTTTCCAGACTCTAATTTGAAGAAACTAGG  250

seq1  TGTCAATCAATTG  263
      |||||||||||||
seq2  TGTCAATCAATTG  263

seq1: chrX_102146040_102146851
seq2: B6Ng01-046K11.g_69_883

seq1  GAATTCACTGAAATTGTGAATCAAGATACAGTTTTCTTTCCATAAGTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGAAATTGTGAATCAAGATACAGTTTTCTTTCCATAAGTTGT  50

seq1  TTGTTTAATGGGAGGGAGTAGAGATGGGGGTATATATGGGACGAGCTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTAATGGGAGGGAGTAGAGATGGGGGTATATATGGGACGAGCTATA  100

seq1  AGGAATAGTCAGATGAATATGATGAAAATACATTGTATGCATGGTAATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATAGTCAGATGAATATGATGAAAATACATTGTATGCATGGTAATAT  150

seq1  TCAAAGACTAAATAAGTTTATTAAAATGGGTGAAAACTCCAATAAAGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGACTAAATAAGTTTATTAAAATGGGTGAAAACTCCAATAAAGTTG  200

seq1  TCCAAAGATATGTGAAATTTGTATGGAGTAGGCTCAAGAAAAACTGGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGATATGTGAAATTTGTATGGAGTAGGCTCAAGAAAAACTGGGTA  250

seq1  TAAAAAATAAGAGAAATAAAAAAAATACACAATTGTTGATAATCTTTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATAAGAGAAATAAAAAAAATACACAATTGTTGATAATCTTTAGT  300

seq1  ATAAGAGTAAACAGAAGGGATGATATACTAGATGGGGGTTTTCAGGTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAGTAAACAGAAGGGATGATATACTAGATGGGGGTTTTCAGGTAAC  350

seq1  ATTCCATTTTTGTTTTGCTTTATTTTAATATGTGATGCTTTGTAGAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATTTTTGTTTTGCTTTATTTTAATATGTGATGCTTTGTAGAAAGT  400

seq1  TTATGTACCAGTGGGAATCACTCAGAAGAGAAGAGTAACTTTGTGGAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTACCAGTGGGAATCACTCAGAAGAGAAGAGTAACTTTGTGGAAGA  450

seq1  AAACAGCAGGATCACTGCTAGGGCTATGCACTGACTGGA-TTTTTTAAAA  499
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAACAGCAGGATCACTGCTAGGGCTATGCACTGACTGGATTTTTTTAAAA  500

seq1  GG-TTTGGAATAAACTGATACAAGTCTGGGTTTTGACAGGAGTATGGATA  548
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGGAATAAACTGATACAAGTCTGGGTTTTGACAGGAGTATGGATA  550

seq1  GTTATCCAAAGTGATGAGAAGGCAAGCAGAGTATTTACTCAGATGTAGGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCCAAAGTGATGAGAAGGCAAGCAGAGTATTTACTCAGATGTAGGT  600

seq1  AGGCAGGAAGTTTCCTTGACTTCTACGTCATCAC-AAGGATGAAGCGTTC  647
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGGCAGGAAGTTTCCTTGACTTCTACGTCATCACAAAGGATGAAGCGTTC  650

seq1  TGAGTATTGGATGCTTTGTGGAGAACAGATGGAGTCTGAGATGTAATGTA  697
      ||||||||||||||||||||||||||||||||| | ||||||||||||||
seq2  TGAGTATTGGATGCTTTGTGGAGAACAGATGGA-TTTGAGATGTAATGTA  699

seq1  CACAGTGAATGAGTTGTCTTATCAGGAAATGGTATGTAACTA-TGGACAT  746
      ||| ||||||||||||||| |||||||||||||||||||||| |||||||
seq2  CACTGTGAATGAGTTGTCTAATCAGGAAATGGTATGTAACTATTGGACAT  749

seq1  ACACTTT-AAGAGTTTATGTTT-CTTCACATATTTCTGTGTTGATGATTT  794
      ||||||| |||||||||||||| ||||||||||| | |||||| ||||||
seq2  ACACTTTAAAGAGTTTATGTTTGCTTCACATATTCCGGTGTTG-TGATTT  798

seq1  GGAGTGGGGGGGGGGTTT  812
       ||  | |||||||||||
seq2  TGA-AGTGGGGGGGGTTT  815