BAC Information

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BAC

Clone NameB6Ng01-049M20
ChromosomeX (Build37)
Map Location 123,303,826 - 123,304,444
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665611, EG626048, LOC100040410, LOC100039903, LOC665679
Downstream gene4932411N23Rik, Gm381, LOC100040472, Gm382, 4921511C20Rik, 4930412D23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049M20.bB6Ng01-049M20.g
ACCDH873959DH873960
length1,198619
definitionDH873959|Mus musculus domesticus DNA, BAC clone: B6Ng01-049M20, 5' end.DH873960|Mus musculus domesticus DNA, BAC clone: B6Ng01-049M20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaatcacaatcaaagcaatatacagcaaacca
gtagccaagatcaaactaaatggagagaagctggagacaatccaactaaa
atcagggactagaaaaggctacccactttttccctacctattcaatatag
tacttgaagtcctagccagagcaattatacagcaaaaggaggtcaagggg
atacaaattgaaaggaagaaattaaaatatcactatttgaagatgatgtg
atagtatatataagtgaccctaaaaatcccaacagagaactcctaatcgt
gataaatagcttcagtccagtagctggatataaatttatctcaaacaaat
cagtggcctttctctacagaagggaaaaacaggatgagagaggaattagg
gaaacaacacctgtcacaatagtcgcaaataatataaaataccttggtgt
gactctaactaaggaagtgaaagatctgtatgataagaacttctagtctc
tgaagaaagaaatcaaagaagatatcagaagatggaaagatctcccatgc
tcatggttttgtaggatcaatatagtaaaaagggctatcttgccaaagca
atctacagtttccatgcaatccccatcaaaagtccaactcaatttttcac
caagttagaaaggaatatttgcaaattcatctggaataacaaaaaaccta
ggatagcaaaaactattctcaatgattaaaagaacctctggtggaatcac
catgcctgacctcaagctgcattacagagcaattgtgattaaaaactgca
tggtacttgtacagtgacagacaggtagaccaatgtaatggaattgacga
cccagatatgaaaccacacatctatggtcacttgatctttgacagggagc
aaaaccatccagtgaaaaagacatcatctcacaatgtgctgcagactgcg
tatcatgtagagatgcaaatgatcattctatctcctgtaaaactcagtct
agtggatcaggattccacctaaatcagagaacaaacttataaggaaaggg
gaaactgaagaattggtacagggaagatctgaaagaacacatgcttgtcc
ggatcggatattatgactctaaactgtcgtagtaacactgcatagacagg
ctcaatgaagacttttcaatctaatacatacatggcttagctcaccat
gaattctttggaaaacactactggtagaaaggaatgcgtattaaacatat
ttttctaataggagaaaattgagagaaacattatttgatgaaattcgaga
tgttctaatacattatttctgataaaaatgtaagaaaactacaggaaaaa
atgtggttaaaatggatgaaattgatggaaaaacaggctgttcaaatgga
aaacttagaaaattcatgttcactattttcaaaactatagatcatcatat
tacgataaaataaaagattatattcgaatgtatttgtgacaaaattgaaa
aaaaatattttaaaaacgtgttaaaatggaaataatagattgaaaaatca
ccgggtaaagaggaaaacgtagaaaacatattctttttcattagagaaaa
aggagagaaacattttctgataaatttcgagatgttcttatacactattt
ctgataaaagtgaaaactgtacagaaaaatgtggttaaaatggaggaaat
tgattgaaaaacgattggtcaaatcgaaaatggagaaaactcatgttcac
tatgagagacagctgatgtgatcattgtaagataggggagtgcgagggag
ggtatgggggacttttggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_123303826_123304444
seq2: B6Ng01-049M20.g_66_684

seq1  GAATTCTTTGGAAAACACTACTGGTAGAAAGGAATGCGTATTAAACATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGAAAACACTACTGGTAGAAAGGAATGCGTATTAAACATAT  50

seq1  TTTTCTAATAGGAGAAAATTGAGAGAAACATTATTTGATGAAATTCGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAATAGGAGAAAATTGAGAGAAACATTATTTGATGAAATTCGAGA  100

seq1  TGTTCTAATACATTATTTCTGATAAAAATGTAAGAAAACTACAGGAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTAATACATTATTTCTGATAAAAATGTAAGAAAACTACAGGAAAAA  150

seq1  ATGTGGTTAAAATGGATGAAATTGATGGAAAAACAGGCTGTTCAAATGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTTAAAATGGATGAAATTGATGGAAAAACAGGCTGTTCAAATGGA  200

seq1  AAACTTAGAAAATTCATGTTCACTATTTTCAAAACTATAGATCATCATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAGAAAATTCATGTTCACTATTTTCAAAACTATAGATCATCATAT  250

seq1  TACGATAAAATAAAAGATTATATTCGAATGTATTTGTGACAAAATTGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGATAAAATAAAAGATTATATTCGAATGTATTTGTGACAAAATTGAAA  300

seq1  AAAAATATTTTAAAAACGTGTTAAAATGGAAATAATAGATTGAAAAATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATTTTAAAAACGTGTTAAAATGGAAATAATAGATTGAAAAATCA  350

seq1  CCGGGTAAAGAGGAAAACGTAGAAAACATATTCTTTTTCATTAGAGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGTAAAGAGGAAAACGTAGAAAACATATTCTTTTTCATTAGAGAAAA  400

seq1  AGGAGAGAAACATTTTCTGATAAATTTTGAGATGTTCTTATACACTATTT  450
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGGAGAGAAACATTTTCTGATAAATTTCGAGATGTTCTTATACACTATTT  450

seq1  CTGATAAAAGTGAAAACTGTACAGAAAAATGTGGTTAAAATGGAGGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAAAAGTGAAAACTGTACAGAAAAATGTGGTTAAAATGGAGGAAAT  500

seq1  TGATTGAAAAACGATTGGTCAAATCGAAAATGGAGAAAACTCATGTTCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGAAAAACGATTGGTCAAATCGAAAATGGAGAAAACTCATGTTCAC  550

seq1  TATGAGAGACAGCTGAGGTCATCATTGTAAGATAGGGGAGTGCGAGGGAG  600
      |||||||||||||||| || ||||||||||||||||||||||||||||||
seq2  TATGAGAGACAGCTGATGTGATCATTGTAAGATAGGGGAGTGCGAGGGAG  600

seq1  GGTATGGGGGACTTTTGGG  619
      |||||||||||||||||||
seq2  GGTATGGGGGACTTTTGGG  619