BAC Information

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BAC

Clone NameB6Ng01-052H07
ChromosomeX (Build37)
Map Location 164,357,722 - 164,478,718
singlet/doubletdoublet
Overlap geneFrmpd4
Upstream geneLOC667791, EG667794, LOC100040850, LOC627268, Tmsb4x, Tlr8, Tlr7, Prps2, EG627311
Downstream geneEG667822, EG637566, Msl31, Arhgap6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052H07.bB6Ng01-052H07.g
ACCDH875809DH875810
length4151,027
definitionDH875809|Mus musculus domesticus DNA, BAC clone: B6Ng01-052H07, 5' end.DH875810|Mus musculus domesticus DNA, BAC clone: B6Ng01-052H07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(164,357,722 - 164,358,142)(164,477,698 - 164,478,718)
sequence
tccagagatccttgtagtcagagggacactgaaggacctatagttcatcc
cacactgaccacttcagaatgtttgtggctatttgaaaaaacctctctag
gctatgacaatgtgtgctgtctaggaaaaccagtaggagaccattgtgag
acatatgacctgcatgggaaacagggcaggtcaccttatttccactgctg
ccctatttgataatgccaagggtcagtaaactggatgtataaaagaataa
atacttctgagtttcatagggcctcagggtctccatctcagctcctcaat
actgcttttgcagtatgggaaaatgaataaatgacaggccttgcaagact
gaggaccttggttcaatctccactcagtgcactttttttttttttagttt
ttcaagacagggttt
gaattcattatgtagctgaggatgaccttgaacccctgattttccctcct
ccctctacttctcaagtactgggattaccacaccttgtcactacatctgc
tcttcatttgacttttcaatgtagtaaaattaattactatgccttttgtg
tttttttttaaactagtatttaattcattcaagtcaaacagattcttctt
tcttttaatcacacataactttcaaagatagtgctctgaaatatttcatt
ctgtagatatacatttaatatattttcctttgacatagttccagtgacaa
gctagaacaccttaatgcgtgaacagacatgtatatctaccatcactcag
tattggtgtatattggcaaagggaagagtcttactacacatttgaggata
gcactgcctacatgggaaaagcatggtgcattaaattcccagacaagctc
tgtaaaatgtcttaaattctgtttaagctcatcaattttctttttctttt
cagcttaataacatgactaatatgtcaaagtgtattaaatccattacata
aagaagattattcataaacctaactcaaaatggctaggtctctgagtttg
tgtgtgtttttaaattgtttacataatgctaaacattcccaatattaagc
tatttaccactgtggtagaaatattctattcctctcgtatatctcttttt
ccttctaccaaaataggccttcccaatatttctctatataaggcaagata
gcaaatatttagcacctccatagagtccctgtcttttttagaggggtgga
aggtggtgtagtttttgagacaaggtctctttttgacaagtctgatcaat
atgttgatcagtgtgaccttgaactttcagagatatgcctgcctctcctc
tgagtactgaataaaagtttgttccaccacactagtataatattgtgact
ttactgtattttcattatgttttaatatttaaaaaataattggggtgtat
atgttttggactgcacaataattctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_164357722_164358142
seq2: B6Ng01-052H07.b_47_467

seq1  GAATTCTCCAGAGATCCTTGTAGTCAGAGGGACACTGAAGGACCTATAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAGAGATCCTTGTAGTCAGAGGGACACTGAAGGACCTATAGT  50

seq1  TCATCCCACACTGACCACTTCAGAATGTTTGTGGCTATTTGAAAAAACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCCACACTGACCACTTCAGAATGTTTGTGGCTATTTGAAAAAACCT  100

seq1  CTCTAGGCTATGACAATGTGTGCTGTCTAGGAAAACCAGTAGGAGACCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGCTATGACAATGTGTGCTGTCTAGGAAAACCAGTAGGAGACCAT  150

seq1  TGTGAGACATATGACCTGCATGGGAAACAGGGCAGGTCACCTTATTTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGACATATGACCTGCATGGGAAACAGGGCAGGTCACCTTATTTCCA  200

seq1  CTGCTGCCCTATTTGATAATGCCAAGGGTCAGTAAACTGGATGTATAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCCCTATTTGATAATGCCAAGGGTCAGTAAACTGGATGTATAAAA  250

seq1  GAATAAATACTTCTGAGTTTCATAGGGCCTCAGGGTCTCCATCTCAGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAATACTTCTGAGTTTCATAGGGCCTCAGGGTCTCCATCTCAGCTC  300

seq1  CTCAATACTGCTTTTGCAGTATGGGAAAATGAATAAATGACAGGCCTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATACTGCTTTTGCAGTATGGGAAAATGAATAAATGACAGGCCTTGC  350

seq1  AAGACTGAGGACCTTGGTTCAATCTCCACTCAGTGCACTTTTTTTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGAGGACCTTGGTTCAATCTCCACTCAGTGCACTTTTTTTTTTTT  400

seq1  TAGTTTTTCAAGACAGGGTTT  421
      |||||||||||||||||||||
seq2  TAGTTTTTCAAGACAGGGTTT  421

seq1: chrX_164477698_164478718
seq2: B6Ng01-052H07.g_67_1084 (reverse)

seq1  TTGTGCAGTCAAAAACATATACA-CACAATTATTTTTTAAAATATTAAAA  49
      |||||||||| |||||||||||| | |||||||||||| ||||||| |||
seq2  TTGTGCAGTCCAAAACATATACACCCCAATTATTTTTT-AAATATT-AAA  48

seq1  ACATAATGAAAATAACAGTAAAGTCACAATATTATACTAGTGTGGTGGAA  99
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACATAATGAAAAT-ACAGTAAAGTCACAATATTATACTAGTGTGGTGGAA  97

seq1  CAAACTTTTAATTCAGTACTCAGGAGGAGAGGCAGGCATATCTCTGAAAG  149
      ||||||||| |||||||||||| |||||||||||||||||||||||||||
seq2  CAAACTTTT-ATTCAGTACTCA-GAGGAGAGGCAGGCATATCTCTGAAAG  145

seq1  TTCAAGGTCACACTGATCAACATATTGATCAGACTTGTC-AAAAGAGACC  198
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTCAAGGTCACACTGATCAACATATTGATCAGACTTGTCAAAAAGAGACC  195

seq1  TTGTCTCAAAAACTACACCACCTTCCACCCCTCTAAAAAAGACAGGGACT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCAAAAACTACACCACCTTCCACCCCTCTAAAAAAGACAGGGACT  245

seq1  CTATGGAGGTGCTAAATATTTGCTATCTTGCCTTATATAGAGAAATATTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGAGGTGCTAAATATTTGCTATCTTGCCTTATATAGAGAAATATTG  295

seq1  GGAAGGCCTATTTTGGTAGAAGGAAAAAGAGATATACGAGAGGAATAGAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGCCTATTTTGGTAGAAGGAAAAAGAGATATACGAGAGGAATAGAA  345

seq1  TATTTCTACCACAGTGGTAAATAGCTTAATATTGGGAATGTTTAGCATTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTACCACAGTGGTAAATAGCTTAATATTGGGAATGTTTAGCATTA  395

seq1  TGTAAACAATTTAAAAACACACACAAACTCAGAGACCTAGCCATTTTGAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACAATTTAAAAACACACACAAACTCAGAGACCTAGCCATTTTGAG  445

seq1  TTAGGTTTATGAATAATCTTCTTTATGTAATGGATTTAATACACTTTGAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTTATGAATAATCTTCTTTATGTAATGGATTTAATACACTTTGAC  495

seq1  ATATTAGTCATGTTATTAAGCTGAAAAGAAAAAGAAAATTGATGAGCTTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAGTCATGTTATTAAGCTGAAAAGAAAAAGAAAATTGATGAGCTTA  545

seq1  AACAGAATTTAAGACATTTTACAGAGCTTGTCTGGGAATTTAATGCACCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAATTTAAGACATTTTACAGAGCTTGTCTGGGAATTTAATGCACCA  595

seq1  TGCTTTTCCCATGTAGGCAGTGCTATCCTCAAATGTGTAGTAAGACTCTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTCCCATGTAGGCAGTGCTATCCTCAAATGTGTAGTAAGACTCTT  645

seq1  CCCTTTGCCAATATACACCAATACTGAGTGATGGTAGATATACATGTCTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGCCAATATACACCAATACTGAGTGATGGTAGATATACATGTCTG  695

seq1  TTCACGCATTAAGGTGTTCTAGCTTGTCACTGGAACTATGTCAAAGGAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACGCATTAAGGTGTTCTAGCTTGTCACTGGAACTATGTCAAAGGAAA  745

seq1  ATATATTAAATGTATATCTACAGAATGAAATATTTCAGAGCACTATCTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTAAATGTATATCTACAGAATGAAATATTTCAGAGCACTATCTTT  795

seq1  GAAAGTTATGTGTGATTAAAAGAAAGAAGAATCTGTTTGACTTGAATGAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTATGTGTGATTAAAAGAAAGAAGAATCTGTTTGACTTGAATGAA  845

seq1  TTAAATACTAGTTTAAAAAAAAACACAAAAGGCATAGTAATTAATTTTAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATACTAGTTTAAAAAAAAACACAAAAGGCATAGTAATTAATTTTAC  895

seq1  TACATTGAAAAGTCAAATGAAGAGCAGATGTAGTGACAAGGTGTGGTAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGAAAAGTCAAATGAAGAGCAGATGTAGTGACAAGGTGTGGTAAT  945

seq1  CCCAGTACTTGAGAAGTAGAGGGAGGAGGGAAAATCAGGGGTTCAAGGTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTACTTGAGAAGTAGAGGGAGGAGGGAAAATCAGGGGTTCAAGGTC  995

seq1  ATCCTCAGCTACATAATGAATTC  1021
      |||||||||||||||||||||||
seq2  ATCCTCAGCTACATAATGAATTC  1018