BAC Information

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BAC

Clone NameB6Ng01-053B01
ChromosomeX (Build37)
Map Location 17,820,757 - 17,821,843
singlet/doubletsinglet
Overlap geneUtx
Upstream geneEfhc2, Fundc1, EG278181, EG668994, EG436196, EG331391, Dusp21, LOC100043951
Downstream geneLOC100043952, 4930578C19Rik, LOC100043098, EG628855, LOC385333, EG628871
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053B01.bB6Ng01-053B01.g
ACCDH876225DH876226
length1,2211,074
definitionDH876225|Mus musculus domesticus DNA, BAC clone: B6Ng01-053B01, 5' end.DH876226|Mus musculus domesticus DNA, BAC clone: B6Ng01-053B01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacataataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatgtagagaagctggaagcaatcccactaaa
atcagggactagacaaggttgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagctttggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaagttag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcggcg
tgactctaactaaggaagtaaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagggcaattgtgataaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggagaaagacagcattttcaacattggtgctggca
caactggttgttatcatgtagagaatgccaatcgatccatactatctcct
tgtactagtcaatctagtgatcagaacttcacataaatcagagacctgaa
acttatgagagaagtggggaaagcttgaagattgggtacaggaaattctg
acagaacgcaatgctgtcctgtagatcgaatgacaaattgaactatgact
cagttctgcagccagaaccgtcttagactagacccacgatgggaagactt
tactactcatatcgataaggc
gaattctagttttataagattagtttataatgaatcatatctagaattac
tgttttaaaatgcagtgatttttttttcagcttcattaagcagtatttca
tatttttttctttccctcagtgaactaattgtgtattctgaaccactgag
atatcttaaactttttcaggtagacattaaattttcctgacttctcaaac
aaggaataattatcacaatctaacttgttttatggttgaagatgatcatt
tcagacagtaattattcttcatctatcatagtattctaggtgtgttttaa
acttttgatgctttctcatagtcactaccatgtaatgctctgcttttatc
atgagaaatgcttatgaatagaaaatactttaaagtttgttttcctatct
ttgtcctttgcttttgttccaatttgatcttatttactgacctcttgtca
caaattctttttcagtataacagtttttgcaggtagtatttgaaacttgc
ttctctgctttgtcagtaaaattatctgattctgtcttatctatgatagt
aatgccttaggcctgttttctactgctctctaatggatgtgctgtgttct
ttcagctttttttcatatagataaatttcaaaggtagatttctatagagc
tattttaaattttgatgtttctctaatagccttacctcttactcatatac
tccaaatcagcttcataaaaccatcctctttttttgaggagaggggtcct
aggctaatatatcgtaaccaaatactttactactgctgttaagttatcct
tctagcttctcccttctccctttattactctcagacgatcatgaagtctg
ggctactcttttggtttttggttcgctccctttttcttttgcttttctgc
ttccattcctttcatctcagcttgactcattccaaaccagtgatataacc
attttttctgtgcatactttacttttagtctgtactataatgtggcagtg
aatttcttgtgcttttattccagcaaatcccatgttatggaaactgaatt
caagtttgtgggcgggggggggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_17820757_17821843
seq2: B6Ng01-053B01.g_66_1139

seq1  GAATTCTAGTTTTATAAGATTAGTTTATAATGAATCATATCTAGAATTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTTTTATAAGATTAGTTTATAATGAATCATATCTAGAATTAC  50

seq1  TGTTTTAAAATGCAGTGATTTTTTTTTCAGCTTCATTAAGCAGTATTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAAAATGCAGTGATTTTTTTTTCAGCTTCATTAAGCAGTATTTCA  100

seq1  TATTTTTTTCTTTCCCTCAGTGAACTAATTGTGTATTCTGAACCACTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTCTTTCCCTCAGTGAACTAATTGTGTATTCTGAACCACTGAG  150

seq1  ATATCTTAAACTTTTTCAGGTAGACATTAAATTTTCCTGACTTCTCAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTAAACTTTTTCAGGTAGACATTAAATTTTCCTGACTTCTCAAAC  200

seq1  AAGGAATAATTATCACAATCTAACTTGTTTTATGGTTGAAGATGATCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATAATTATCACAATCTAACTTGTTTTATGGTTGAAGATGATCATT  250

seq1  TCAGACAGTAATTATTCTTCATCTATCATAGTATTCTAGGTGTGTTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACAGTAATTATTCTTCATCTATCATAGTATTCTAGGTGTGTTTTAA  300

seq1  ACTTTTGATGCTTTCTCATAGTCACTACCATGTAATGCTCTGCTTTTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGATGCTTTCTCATAGTCACTACCATGTAATGCTCTGCTTTTATC  350

seq1  ATGAGAAATGCTTATGAATAGAAAATACTTTAAAGTTTGTTTTCCTATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAATGCTTATGAATAGAAAATACTTTAAAGTTTGTTTTCCTATCT  400

seq1  TTGTCCTTTGCTTTTGTTCCAATTTGATCTTATTTACTGACCTCTTGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTTTGCTTTTGTTCCAATTTGATCTTATTTACTGACCTCTTGTCA  450

seq1  CAAATTCTTTTTCAGTATAACAGTTTTTGCAGGTAGTATTTGAAACTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCTTTTTCAGTATAACAGTTTTTGCAGGTAGTATTTGAAACTTGC  500

seq1  TTCTCTGCTTTGTCAGTAAAATTATCTGATTCTGTCTTATCTATGATAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGCTTTGTCAGTAAAATTATCTGATTCTGTCTTATCTATGATAGT  550

seq1  AATGCCTTAGGCCTGTTTTCTACTGCTCTCTAATGGATGTGCTGTGTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCTTAGGCCTGTTTTCTACTGCTCTCTAATGGATGTGCTGTGTTCT  600

seq1  TTCAGCTTTTTTTCATATAGATAAATTTCAAAGGTAGATTTCTATAGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTTTTTTTCATATAGATAAATTTCAAAGGTAGATTTCTATAGAGC  650

seq1  TATTTTAAATTTTGATGTTTCTCTAATAGCCTTACCTCTTACTCATATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAAATTTTGATGTTTCTCTAATAGCCTTACCTCTTACTCATATAC  700

seq1  TCCAAATCAGCTTCATAAAACCATCCTCTTTTTTTGAGGAGAGGGGTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATCAGCTTCATAAAACCATCCTCTTTTTTTGAGGAGAGGGGTCCT  750

seq1  AGGCTAATATATCGTAACCAAATACTTTACTACTGCTGTTAAGTTATCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAATATATCGTAACCAAATACTTTACTACTGCTGTTAAGTTATCCT  800

seq1  TCTAGCTTCTCCCTTCTCCCTTTATTTACTCTCAGACGATCATGAAGTCT  850
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCTAGCTTCTCCCTTCTCCCTTTA-TTACTCTCAGACGATCATGAAGTCT  849

seq1  GGGCTACTCTTTTGGTTTTTGGTTCGCTCCCTTTTTCTTTTGCTTTTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGGCTACTCTTTTGGTTTTTGGTTCGCTCCCTTTTTCTTTTGC-TTTTCT  898

seq1  GCTTCCATTCCTTTCATCTCAGCTTTGACTCATTCCAAACCAGTGAATAT  950
      ||||||||||||||||||||||| ||||||||||||||||||||| ||||
seq2  GCTTCCATTCCTTTCATCTCAGC-TTGACTCATTCCAAACCAGTG-ATAT  946

seq1  AACCATTTTTTTCTGTGCATAACTTTACTTTTAGTCTGTACTATACATTG  1000
      ||||| |||||||||||||| |||||||||||||||||||||||| ||  
seq2  AACCA-TTTTTTCTGTGCAT-ACTTTACTTTTAGTCTGTACTATA-AT--  991

seq1  TTGGCAGGTGAATATTCTTGTGCTTTTATCACAGCCATTCCCATTGTTAT  1050
       ||||| |||||| |||||||||||||||  |||| | ||||| ||||||
seq2  GTGGCA-GTGAAT-TTCTTGTGCTTTTATTCCAGCAAATCCCA-TGTTAT  1038

seq1  GGAAACTGATTTCAAAGTTTTGTGGTGGGGGTGGGAT  1087
      ||||||||| ||| ||||||   || ||||| |||||
seq2  GGAAACTGAATTC-AAGTTTGTGGGCGGGGGGGGGAT  1074