BAC Information

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BAC

Clone NameB6Ng01-054G10
ChromosomeX (Build37)
Map Location 17,792,212 - 17,792,713
singlet/doubletsinglet
Overlap geneUtx
Upstream geneEfhc2, Fundc1, EG278181, EG668994, EG436196, EG331391, Dusp21, LOC100043951
Downstream geneLOC100043952, 4930578C19Rik, LOC100043098, EG628855, LOC385333, EG628871
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054G10.bB6Ng01-054G10.g
ACCDH877153DH877154
length1,238496
definitionDH877153|Mus musculus domesticus DNA, BAC clone: B6Ng01-054G10, 5' end.DH877154|Mus musculus domesticus DNA, BAC clone: B6Ng01-054G10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccccaaagattgaaaagatttggtgacagcaaaattggaagct
gatcctcagttacagtggcaaacatggttaaaagaggaagctctggccat
agaacaacaaaatagggctaaaggtgttatatttccaagggcagttacta
catgaatgttgctatgatgaattacaaaggcaggttgaatttggtaatcc
caccttgacatttagtagatttaaatacttgggataaggttgaagaatca
caaaagagatctgaatcatttactaaaaatatacaaagcccaatagaagc
cttcactaattttttgcaaagattgacttcggctataaatagaatagtat
cagattcaaaagtcaggcaactattaattgaatctttgccttttgaaaat
gctaatttggcataaaatgggtaattagacctttaaagctaagatcgaca
ccaatagatgaacagattataaatacagctgatattggatctcacattta
taatgctactctgttagggtgcaggagttgcctcacaaagcacatgaaca
tcaatctcatgtagatagggatggcctattgagccttcaccccaagactg
atcgatcagggcctcagaccaaactctggagctggctgtgacactgagac
agaatcttacagagctcttaaacctgaaattcttaaacatctgtaccaag
ttattctaccaatcaggatgtagacatagaggacttccttaggaacatgt
ctgttatatacttttcctgttcccattggttgtgatattcaattgtggtt
ggtgaattgcctttcctaacattcatgtctcaacctgcctaacaggatgt
cagttatacatgtacatgtttctttctgccaagtagaatgtcaagtacca
gggtggaggaacttaaacattactctacccctactaaaatggaagtccta
ttccaaatggtgtctatatgtgtacatgactttctatgttgggacatatc
ccaggttcactatatcacagtacagagtctgctggggggtgtcagacact
tattgtattactaacaagtagttctaagtgactatgtgatagtttccaga
acccaagatagaacatacgaatttggctcattcatgcaagaagtcctgta
caggcaatgaagtctttcaacgtacgctaagtgctagctcacggagccaa
cctacctatttctgacatgtagaaaatgttactgagct
tatgtgacttctaaaaacattgaaaaacatttaagcacattgtaaaatct
aataatgtggtaatttactttcattatatcctcattaaccccaattttct
aagtgagaacattatatgtaactaagggattcacaaaattgaagagttaa
gaaggtctcaacatccattttgaaaattgatatttaattttctttaattt
agttagaactgttttttaatcaaaatcattcatttcctattccatcctct
gaaagaatctgaacaatactgatgagattgtgcaaaactgactgaactaa
aatgtatttctccaactctcaaataaaaaatgtaatatatgacatagcag
aaaaggtactccaaacacaagagaaattgagtcatgaaatatatcaccta
taaagtcaagacttgaaaaacaactactttctctgaagaaggaaatacag
attgaatcacaacaaacaactctgtgtgtgtgtgtggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_17792212_17792713
seq2: B6Ng01-054G10.g_67_568 (reverse)

seq1  CCCCCCCCCCCACACACACACACAGAGTTGTTTGTTGTGATTCAATCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCACACACACACACAGAGTTGTTTGTTGTGATTCAATCTGT  50

seq1  ATTTCCTTCTTCAGAGAAAGTAGTTGTTTTTCAAGTCTTGACTTTATAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTTCTTCAGAGAAAGTAGTTGTTTTTCAAGTCTTGACTTTATAGG  100

seq1  TGATATATTTCATGACTCAATTTCTCTTGTGTTTGGAGTACCTTTTCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATATTTCATGACTCAATTTCTCTTGTGTTTGGAGTACCTTTTCTGC  150

seq1  TATGTCATATATTACATTTTTTATTTGAGAGTTGGAGAAATACATTTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCATATATTACATTTTTTATTTGAGAGTTGGAGAAATACATTTTAG  200

seq1  TTCAGTCAGTTTTGCACAATCTCATCAGTATTGTTCAGATTCTTTCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCAGTTTTGCACAATCTCATCAGTATTGTTCAGATTCTTTCAGAG  250

seq1  GATGGAATAGGAAATGAATGATTTTGATTAAAAAACAGTTCTAACTAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAATAGGAAATGAATGATTTTGATTAAAAAACAGTTCTAACTAAAT  300

seq1  TAAAGAAAATTAAATATCAATTTTCAAAATGGATGTTGAGACCTTCTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAAATTAAATATCAATTTTCAAAATGGATGTTGAGACCTTCTTAA  350

seq1  CTCTTCAATTTTGTGAATCCCTTAGTTACATATAATGTTCTCACTTAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCAATTTTGTGAATCCCTTAGTTACATATAATGTTCTCACTTAGAA  400

seq1  AATTGGGGTTAATGAGGATATAATGAAAGTAAATTACCACATTATTAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGGGTTAATGAGGATATAATGAAAGTAAATTACCACATTATTAGAT  450

seq1  TTTACAATGTGCTTAAATGTTTTTCAATGTTTTTAGAAGTCACATAGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAATGTGCTTAAATGTTTTTCAATGTTTTTAGAAGTCACATAGAAT  500

seq1  TC  502
      ||
seq2  TC  502