BAC Information

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BAC

Clone NameB6Ng01-054M01
ChromosomeX (Build37)
Map Location 128,120,516 - 128,121,714
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665799, LOC670449
Downstream geneLOC245600, EG631264
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054M01.bB6Ng01-054M01.g
ACCDH877411DH877412
length1,2301,181
definitionDH877411|Mus musculus domesticus DNA, BAC clone: B6Ng01-054M01, 5' end.DH877412|Mus musculus domesticus DNA, BAC clone: B6Ng01-054M01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttaactgaggaatactgatgactaaggaacattaaaaaatgttc
aggttcctgtatacctcagagactagtcagtacaggtgagagtgggatta
cagaagctaacagcttatgggacaggcagaagcaacacagctttgggggt
agatcccgtttcgggatccagacatccaggaaccttccctgacagagaag
aggtttcctccccacttgggaaggctttggagtgcacctgggggagccat
cttggttcctggatccctcaagagactagtctgcaaaggtgagagtgtgg
actacagaagctaacagattctgggacagagagaagacacacaacttctg
gggcagaacccatttcgggttccagacatctgagcaccttccctgccaga
ggagaggtgtctgccctgcctgggagggctttgctagagcacctggggga
gccatcttggttcctggatccctgagagactagtctgcacaggtgagagt
gtggactacagaagctaacagattctaggactggcagaagtgacacagct
tctaggacaggccctgttttgggccttcatcttctgccaggaggcaagtc
tgaacgccaaatatctgcaccttccctgcaagaggagagcttgcctgaag
agagtactctgaccactgaaactcaggagagagctagtctcccagttctg
ctaatagaggctaacagaatcacaaaaggaacaagctctaaccagaaaca
actataacaactaactccagagattaccagatggctaaaggcaaacataa
gaatcttactaacagaaaccgagaccactcaccatcatcagaaccaagca
ctctcacctcagccagtcctggatatgccaacacacctgaaaagctagac
ctggatttaaaagcatatctcattataatggtagaggacatcaagaagga
ctttaatgaatcacttaaagaaatataggagaacactgttaagagtacca
gttcttaaggaaaacaggaaaatcacccaacaggtgatggattgacaact
attagacttaaaggaagtgaccataaaaaccatgtctacctggaatgaac
atgagaatctgacccgatgcagctcgcacgaatcacgggaaggatctcag
gtgagatctagaactgccacattagatgcagtcagtcaccggaatcgcca
tgagacacttgcatgattggatgaattcct
gaattccagtttatagccagctggccaaaaacatgtgactgacatctgat
gtggaagacaatctaatgacatggtgcccttagactatgggaccttacag
tttctcggagtagagagttttcaaatggaattgacctagctggtgttcag
tggtggacttcctgatgtgtgggggaaattgcatacacagttggtgtcag
aaatgttgttctgaacaagaggagatcaagaggtggaaaaatactgttgt
tttctccctatttcaaacagttataaatcaggacttctttaaaacatctg
tttgttagaggacaaactgcatggattgaaccagtcattgctgaatcctt
tagtgagtcattacttggttgtacattttcatggggactggtagaggggc
ataacctctttggtaagatgatttccatctttgggtaattcctcagagaa
gactgccactgtgagccataagtaaccagtgatggggtcagctagagatg
ggaaatgcaaccatgtaaaagattaacagcatctcagttacagtctgctt
ccctttgcagcaagagaagcaggaggaatacattcacaaaggtcctgcaa
atgatgagagaagaaatggctcagataacagtgaaggcaaatttgtggag
gacaggtgttcttccaaaagatagaaagtcatgtacagaggcttcacatc
ctctcaacctcacttgtcattccagcctctgccacacttagctgttcata
ctgaagctatgctctcagggcctccaagtacacctcacagttcttagggc
atgaatgggtactgttctttctatgccatactatctgagattaaattatg
atgaccttattaaaaaacatggtgccatttgagcatacagaacccagttg
tgtttgatggccaattctcaacttctgaagactgtctattcctttcttta
caaagtggatgattctgagattcatttcacagtgcatttcagatggtctt
ctttagaacaaggcattgtccttgtaatggtgggcacactgcccctcttc
agattgcctcacattcagactcaagcattgcttcattattcaggagtttg
caactgaagacaatccaatgtttctatggcatattaacgatcgaagagac
aaaaggcagccaacgaatcattgtttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_128120516_128121714
seq2: B6Ng01-054M01.g_66_1246

seq1  GAATTCCAGTTTATAGCCAGCTGGCCAAAAACATGTGACTGACATCTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTTTATAGCCAGCTGGCCAAAAACATGTGACTGACATCTGAT  50

seq1  GTGGAAGACAATCTAATGACATGGTGCCCTTAGACTATGGGACCTTACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGACAATCTAATGACATGGTGCCCTTAGACTATGGGACCTTACAG  100

seq1  TTTCTCGGAGTAGAGAGTTTTCAAATGGAATTGACCTAGCTGGTGTTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCGGAGTAGAGAGTTTTCAAATGGAATTGACCTAGCTGGTGTTCAG  150

seq1  TGGTGGACTTCCTGATGTGTGGGGGAAATTGCATACACAGTTGGTGTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGACTTCCTGATGTGTGGGGGAAATTGCATACACAGTTGGTGTCAG  200

seq1  AAATGTTGTTCTGAACAAGAGGAGATCAAGAGGTGGAAAAATACTGTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTGTTCTGAACAAGAGGAGATCAAGAGGTGGAAAAATACTGTTGT  250

seq1  TTTCTCCCTATTTCAAACAGTTATAAATCAGGACTTCTTTAAAACATCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCCTATTTCAAACAGTTATAAATCAGGACTTCTTTAAAACATCTG  300

seq1  TTTGTTAGAGGACAAACTGCATGGATTGAACCAGTCATTGCTGAATCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTAGAGGACAAACTGCATGGATTGAACCAGTCATTGCTGAATCCTT  350

seq1  TAGTGAGTCATTACTTGGTTGTACATTTTCATGGGGACTGGTAGAGGGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAGTCATTACTTGGTTGTACATTTTCATGGGGACTGGTAGAGGGGC  400

seq1  ATAACCTCTTTGGTAAGATGATTTCCATCTTTGGGTAATTCCTCAGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCTCTTTGGTAAGATGATTTCCATCTTTGGGTAATTCCTCAGAGAA  450

seq1  GACTGCCACTGTGAGCCATAAGTAACCAGTGATGGGGTCAGCTAGAGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCCACTGTGAGCCATAAGTAACCAGTGATGGGGTCAGCTAGAGATG  500

seq1  GGAAATGCAACCATGTAAAAGATTAACAGCATCTCAGTTACAGTCTGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGCAACCATGTAAAAGATTAACAGCATCTCAGTTACAGTCTGCTT  550

seq1  CCCTTTGCAGCAAGAGAAGCAGGAGGAATACATTCACAAAGGTCCTGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGCAGCAAGAGAAGCAGGAGGAATACATTCACAAAGGTCCTGCAA  600

seq1  ATGATGAGAGAAGAAATGGCTCAGATAACAGTGAAGGCAAATTTGTGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGAGAGAAGAAATGGCTCAGATAACAGTGAAGGCAAATTTGTGGAG  650

seq1  GACAGGTGTTCTTCCAAAAGATAGAAAGTCATGTACAGAGGCTTCACATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGTGTTCTTCCAAAAGATAGAAAGTCATGTACAGAGGCTTCACATC  700

seq1  CTCTCAACCTCACTTGTCATTCCAGCCTCTGCCACACTTAGCTGTTCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAACCTCACTTGTCATTCCAGCCTCTGCCACACTTAGCTGTTCATA  750

seq1  CTGAAGCTATGCTCTCAGGGCCTCCAAGTACACCTCACAGTTCTTAGGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCTATGCTCTCAGGGCCTCCAAGTACACCTCACAGTTCTTAGGGC  800

seq1  ATGAATGGGTACTGTTCTTTCTATGCCATACTATCTGAGATTAAATTATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGGGTACTGTTCTTTCTATGCCATACTATCTGAGATTAAATTATG  850

seq1  ATGACCTTATTAAAAAACATGGTGCCATTTGAGCATACAGAACCCAGTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCTTATTAAAAAACATGGTGCCATTTGAGCATACAGAACCCAGTTG  900

seq1  TGTTTGATGGCCAATTCTCAACTTCTGAAGACTGTCTATTCCTTTCTTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGATGGCCAATTCTCAACTTCTGAAGACTGTCTATTCCTTTCTTTA  950

seq1  CCAAGGTGGATGATTCTGAGATTCATTTCACAGTGCATTTCAGATGGTCT  1000
       ||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  -CAAAGTGGATGATTCTGAGATTCATTTCACAGTGCATTTCAGATGGTCT  999

seq1  CTTTAAGAACAAGGCATTGTCCCTGTAATGGTGGGGAACACTGCCCACTC  1050
        || ||||||||||||||||| ||||||||| ||| ||||||||| |||
seq2  TCTTTAGAACAAGGCATTGTCCTTGTAATGGT-GGGCACACTGCCC-CTC  1047

seq1  TCCAAAGATTTGCTCACATTCAGACTTCAAAGCAATGGCTTCATTATTCA  1100
      | |  |||||  ||||||||||||||   |||| || |||||||||||||
seq2  TTC--AGATTGCCTCACATTCAGACT--CAAGC-ATTGCTTCATTATTCA  1092

seq1  GGAAGTTGCAACTGGAAGACAAATCAAATGTTTCTATGGGCATAAATTCA  1150
      |||  |||||||| |||||| |||| ||||||||||| |||||  ||| |
seq2  GGAGTTTGCAACT-GAAGAC-AATCCAATGTTTCTAT-GGCAT--ATTAA  1137

seq1  CGGATTCAGAAGAGACAAAAAGCAGCAACAGAAATCAATTGTTTTTTTT  1199
      | |||   |||||||||||| ||||| | |  |||| ||||||||||||
seq2  C-GAT--CGAAGAGACAAAAGGCAGCCA-ACGAATC-ATTGTTTTTTTT  1181