BAC Information

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BAC

Clone NameB6Ng01-055G18
ChromosomeX (Build37)
Map Location 78,349,968 - 78,351,142
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC654474, LOC629153, LOC546338, LOC100042229, LOC667776, EG629182, Tmem47
Downstream geneLOC100041462, LOC100041474, 4930595M18Rik, EG667799
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055G18.bB6Ng01-055G18.g
ACCDH877874DH877875
length1,1631,107
definitionDH877874|Mus musculus domesticus DNA, BAC clone: B6Ng01-055G18, 5' end.DH877875|Mus musculus domesticus DNA, BAC clone: B6Ng01-055G18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattattcttgacatcttattaatactttattgtgtaaatgtatc
acattttgattattcatctaccagttgatgaatgggtaaacctttccatg
tcttggcttttatgaatagagcagcaatgaacaaggatgagcaagtgtct
ctgtaaggatcatgtcatatatagatagtcctttggatatatgatctgtg
tttcactattttgtaggcatttactaatcaaatcaaattgacaatcaaaa
tttagcaccataccatccttccatgcagttttaataaagttttctttcct
attgtcccactaaatgttacagacatttgtaccttaataatataggctac
tgacaatagaaatttactttttttcttaattgaaaacatttagtttaaat
tggagacaaaagtgatatgggttcctgcatgaattgtttatattagccac
aaaatttattgcccaatatcttactctatattttaatacactatattatt
aataacagtgcaaggctattatattagcaattttactttgaaatcttaat
tcacttcacagtataagatagagttataactatgctctcatccaatatta
taagacccatggactctgagcttacatctttatcaacatctagtaccaca
gatacagacacagttttgtgttcatgtctagaaataatagaactgaatga
tgggtaaattttaaaagtatgtgaaacacttaggaagcagaaatgtctgc
aaatcagtgtgtgtgtgtacatatatgcatgaacatgtgtccatttgaat
caaagagaaagactaacatctggaacacaggaacaaggacagcttgagga
ttgttcatcatcatgaaaatatgttggccttgacagaatttggtattatg
gatgagtatttgggagaaattgagtactctgtctacaatgcttgctcaac
agattaagttcatggatttactggtaataaaagaagtctctggaccatgt
aagggattgcagaagcatagcttttgttgctggctattttatacattaat
gcatcttcaaacaaattattttctgctctgcttggagaggagatttttct
tgtcatgagtgaatggagatactgacttgctgactttcctcacgtggata
aagatgacttatt
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaaaagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctctcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgttgccgcctcagaagctctgtggctcttgccgggaaggtggc
tggttgtctggagctgaagatggtgccgccccagaatctctgtgactctc
tcacccgtcccagaaacggctggcactctgtattccacacggtcacccgt
gcagcctgccctccgcggagtcccggagccaagaaggctcccgccggcgc
ctgtgccacaaacctctcaggccaggcagacccccgtgctctcaccagga
aggtggccggctgtctggagctgaagatggcgccgcccagaagctctgca
actctctcgcccgtcccagaaacggctggcactctgtattcccacacggt
cacccgtgcagcctgccctccgcggagtcccggagccaagaaaggctccc
gcccgcgcctgtgccacaaactctccagccaggcagacccccgtgctctc
acaagaaagtgccggctgtctggagctgatgatggcgccgcccagagctc
tgcgattctctcgcccgtccagaaacggctggcacttgtattcacacggt
ccccgtgcacttgccctcgcggagttccggagccaagaaggctcccgttg
ctcctgtccacaatctcttcaggcaggaagaccccgttcctataccagga
aagtgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_78349968_78351142
seq2: B6Ng01-055G18.b_47_1209 (reverse)

seq1  AATAAGTCATCTTTTATCACAGTGAGGAAAGGTCAGCAAGTCAGTAATCC  50
      ||||||||||| ||||||   ||||||||| |||||||||||||||   |
seq2  AATAAGTCATC-TTTATCCACGTGAGGAAA-GTCAGCAAGTCAGTA--TC  46

seq1  TCCATTCACTCACTGAC-AGAAATATCCTCCTTCCTTCCAAAGCAGAGCA  99
      |||||||||||| |||| ||||| |||     ||||  | ||||||||||
seq2  TCCATTCACTCA-TGACAAGAAAAATC-----TCCTCTCCAAGCAGAGCA  90

seq1  GAAAAATGATTTGTTTG-AGATTGGCATTAATGTATAAAATAGCCAGGCA  148
      | ||||| ||||||||| ||||  |||||||||||||||||||||||  |
seq2  G-AAAATAATTTGTTTGAAGAT--GCATTAATGTATAAAATAGCCAGCAA  137

seq1  C-ATAGCTATGCTTCTGCTATCCCTTACATGGTCCAGAGACTTCTTTTAT  197
      | | |||||||||||||| |||||||||||||||||||||||||||||||
seq2  CAAAAGCTATGCTTCTGCAATCCCTTACATGGTCCAGAGACTTCTTTTAT  187

seq1  TACCAGTTAAATCCATGAACTTAATCTGTTGGAGCAAGCATTGTAGACAG  247
      |||||| ||||||||||||||||||||||| |||||||||||||||||||
seq2  TACCAG-TAAATCCATGAACTTAATCTGTT-GAGCAAGCATTGTAGACAG  235

seq1  AGTACTCAATTTCTCCCAAATACTCATCCATAATACCAAATTCTGTCAAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTCAATTTCTCCCAAATACTCATCCATAATACCAAATTCTGTCAAG  285

seq1  GCCAACATATTTTCATGATGATGAACAATCCTCAAGCTGTCCTTGTTCCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACATATTTTCATGATGATGAACAATCCTCAAGCTGTCCTTGTTCCT  335

seq1  GTGTTCCAGATGTTAGTCTTTCTCTTTGATTCAAATGGACACATGTTCAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCCAGATGTTAGTCTTTCTCTTTGATTCAAATGGACACATGTTCAT  385

seq1  GCATATATGTACACACACACACTGATTTGCAGACATTTCTGCTTCCTAAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATATGTACACACACACACTGATTTGCAGACATTTCTGCTTCCTAAG  435

seq1  TGTTTCACATACTTTTAAAATTTACCCATCATTCAGTTCTATTATTTCTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCACATACTTTTAAAATTTACCCATCATTCAGTTCTATTATTTCTA  485

seq1  GACATGAACACAAAACTGTGTCTGTATCTGTGGTACTAGATGTTGATAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGAACACAAAACTGTGTCTGTATCTGTGGTACTAGATGTTGATAAA  535

seq1  GATGTAAGCTCAGAGTCCATGGGTCTTATAATATTGGATGAGAGCATAGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAAGCTCAGAGTCCATGGGTCTTATAATATTGGATGAGAGCATAGT  585

seq1  TATAACTCTATCTTATACTGTGAAGTGAATTAAGATTTCAAAGTAAAATT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTCTATCTTATACTGTGAAGTGAATTAAGATTTCAAAGTAAAATT  635

seq1  GCTAATATAATAGCCTTGCACTGTTATTAATAATATAGTGTATTAAAATA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATATAATAGCCTTGCACTGTTATTAATAATATAGTGTATTAAAATA  685

seq1  TAGAGTAAGATATTGGGCAATAAATTTTGTGGCTAATATAAACAATTCAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTAAGATATTGGGCAATAAATTTTGTGGCTAATATAAACAATTCAT  735

seq1  GCAGGAACCCATATCACTTTTGTCTCCAATTTAAACTAAATGTTTTCAAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAACCCATATCACTTTTGTCTCCAATTTAAACTAAATGTTTTCAAT  785

seq1  TAAGAAAAAAAGTAAATTTCTATTGTCAGTAGCCTATATTATTAAGGTAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAAAAAGTAAATTTCTATTGTCAGTAGCCTATATTATTAAGGTAC  835

seq1  AAATGTCTGTAACATTTAGTGGGACAATAGGAAAGAAAACTTTATTAAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCTGTAACATTTAGTGGGACAATAGGAAAGAAAACTTTATTAAAA  885

seq1  CTGCATGGAAGGATGGTATGGTGCTAAATTTTGATTGTCAATTTGATTTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGGAAGGATGGTATGGTGCTAAATTTTGATTGTCAATTTGATTTG  935

seq1  ATTAGTAAATGCCTACAAAATAGTGAAACACAGATCATATATCCAAAGGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTAAATGCCTACAAAATAGTGAAACACAGATCATATATCCAAAGGA  985

seq1  CTATCTATATATGACATGATCCTTACAGAGACACTTGCTCATCCTTGTTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTATATATGACATGATCCTTACAGAGACACTTGCTCATCCTTGTTC  1035

seq1  ATTGCTGCTCTATTCATAAAAGCCAAGACATGGAAAGGTTTACCCATTCA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGCTCTATTCATAAAAGCCAAGACATGGAAAGGTTTACCCATTCA  1085

seq1  TCAACTGGTAGATGAATAATCAAAATGTGATACATTTACACAATAAAGTA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTGGTAGATGAATAATCAAAATGTGATACATTTACACAATAAAGTA  1135

seq1  TTAATAAGATGTCAAGAATAATGAATTC  1175
      ||||||||||||||||||||||||||||
seq2  TTAATAAGATGTCAAGAATAATGAATTC  1163