BAC Information

Click to search

BAC

Clone NameB6Ng01-055M06
ChromosomeX (Build37)
Map Location 152,481,261 - 152,482,188
singlet/doubletsinglet
Overlap genenone
Upstream geneMagea5, Magea1, 1700042B14Rik, LOC245676, Amd-ps1, LOC667369, Sat1, Acot9, LOC667383, Prdx4, LOC667394, Ptchd1
Downstream gene4930503H13Rik, LOC640803, LOC434885
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055M06.bB6Ng01-055M06.g
ACCDH878121DH878122
length1,0221,075
definitionDH878121|Mus musculus domesticus DNA, BAC clone: B6Ng01-055M06, 5' end.DH878122|Mus musculus domesticus DNA, BAC clone: B6Ng01-055M06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttggattgttgtctcatttcttgaattcttatatattttggat
attatcttcctggtagatgtggggttggacaaaatattttcccattctgt
taactgctgttttgtttgtccttcatcttgtagaaacttttcagtttcat
gaggtcccatatgactgcgttagtacctgcactattagcattctgttcag
gaagttgtctcctgtggcaatgtgttcaatgctattccccactttctctt
gaatcaggttcagtgtatctgatttcatgttatgatatttgatccacttt
gacttaatttttgtgtgagttgatagatatagttctattttcattcttct
acatgccaatatccagtcagaccatttgttgatgtgattttcttttttct
atggtacttttttggcttttctgtcaaaaatcacgtacccataggtgtgt
agatttgtgtttagatcatcaatgtgattcctttaatcgacctgtttgtt
ttatgccaatacaatatgcttttattactattattctaaagtacagcttg
aaatcaggatggtaatactgccagaatctattccattacacagtattatt
aaaaatattaaattccattttcctttggaatgactctttgagacgaatta
tttattagtaaatgcctaggccatagcattgtgccatttcctgactagct
tgtaacttatttaacccattcaaatttttctgtgtttacaatgtgcttag
tttctcccttcagtcccagccctcttctcccttcatgtctcttctagatc
ttctgctggtttatgtccatcttcttagtctatcccttggtctgtctctc
ctgtggctctccagtttctccctgcatctctcttttatctcttcctattt
cccaaatcctctctcattctgctaatgttccaagtcccctttctacctga
gatcattgatcactggctgtattgacagtgatgtttaaagaattctctct
acacatgatggtttatttatct
gaattctttgtttagcactgtaccctattttttaaaaagggttatttggt
tctctggagtctaacctcttgagttctttatatattttggatattagtac
tctattggatatagggttggtaagatgttttcccaatctgttgcttgctg
ttttctcctaatgacagtgtcctttgctttacagaagctttgcaatttta
tgaggtcccatttgtcaaccttagagcctaagccattggtgttctgttca
gaaaatttccccctgttcagatgtgttggaggctctttatcattttctct
tctattagattcagtgtatctggttttatttggaggtccttaatccactt
ggatttgagctttgtgcaaggatataagaatagatccatttgcattcttc
tacatgccatccaccactagagccagcaccatttgtagaatatgctgtca
tttttccactggatgattttttgtttttgttttttgttttattttgttgt
caaagatcaggtgaccatagatgtatgcttttaattctgggtcctcaatt
ctattccatcagtctacctatctgtccctgtaccaataccatgcagtttt
tattactactgctctgtagtacagcttgaggtcagagatggtgattaccc
aagaagttctcctgttgttgagaatagttttccctaccctgttttttgtt
gttgtttgtttgtttgtttgttttgatagtcccaatgaatttgaaaattg
ctcttttctatctctgtgaagaattgagtccaaattttgatagggattgc
actgaatctatagattgttttgtcaagatgaccatttttactatattaat
cctgccaatccataagcatgggagatctttcatcttctgaagattttctt
cagtttctttattcagagacttgaagttcttgtcacacataacctttcac
ttgcttggtagagtcacaccaaggtgttttaattattgtgactattgtga
agggtgtctgtggacatgaaagcagcatatagtttctggtggatctaggt
ttaaatcttctgctgagaaatggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_152481261_152482188
seq2: B6Ng01-055M06.b_153_1072

seq1  ACTGCTGTTTTGTTTGTCCTTCATCTTGTAGAAACTTTTCAGTTTCATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTGTTTTGTTTGTCCTTCATCTTGTAGAAACTTTTCAGTTTCATGA  50

seq1  GGTCCCATATGACTGCGTTAGTACCTGCACTATTAGCATTCTGTTCAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCATATGACTGCGTTAGTACCTGCACTATTAGCATTCTGTTCAGGA  100

seq1  AGTTGTCTCCTGTGGCAATGTGTTCAATGCTATTCCCCACTTTCTCTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTCTCCTGTGGCAATGTGTTCAATGCTATTCCCCACTTTCTCTTGA  150

seq1  ATCAGGTTCAGTGTATCTGATTTCATGTTATGATATTTGATCCACTTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGTTCAGTGTATCTGATTTCATGTTATGATATTTGATCCACTTTGA  200

seq1  CTTAATTTTTGTGTGAGTTGATAGATATAGTTCTATTTTCATTCTTCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTTTTGTGTGAGTTGATAGATATAGTTCTATTTTCATTCTTCTAC  250

seq1  ATGCCAATATCCAGTCAGACCATTTGTTGATGTGATTTTCTTTTTTCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAATATCCAGTCAGACCATTTGTTGATGTGATTTTCTTTTTTCTAT  300

seq1  GGTACTTTTTTGGCTTTTCTGTCAAAAATCACGTACCCATAGGTGTGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTTTTTTGGCTTTTCTGTCAAAAATCACGTACCCATAGGTGTGTAG  350

seq1  ATTTGTGTTTAGATCATCAATGTGATTCCTTTAATCGACCTGTTTGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGTTTAGATCATCAATGTGATTCCTTTAATCGACCTGTTTGTTTT  400

seq1  ATGCCAATACAATATGCTTTTATTACTATTATTCTAAAGTACAGCTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAATACAATATGCTTTTATTACTATTATTCTAAAGTACAGCTTGAA  450

seq1  ATCAGGATGGTAATACTGCCAGAATCTATTCCATTACACAGTATTATTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGATGGTAATACTGCCAGAATCTATTCCATTACACAGTATTATTAA  500

seq1  AAATATTAAATTCCATTTTCCTTTGGAATGACTCTTTGAGACGAATTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTAAATTCCATTTTCCTTTGGAATGACTCTTTGAGACGAATTATT  550

seq1  TATTAGTAAATGCCTAGGCCATAGCATTGTGCCATTTCCTGACTAGCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGTAAATGCCTAGGCCATAGCATTGTGCCATTTCCTGACTAGCTTG  600

seq1  TAACTTATTTAACCCATTCAAATTTTTCTGTGTTTACAATGTGCTTAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTATTTAACCCATTCAAATTTTTCTGTGTTTACAATGTGCTTAGTT  650

seq1  TCTCCCTTCAGTCCCAGCCCTCTTCTCCCTTCATGTCTCTTCTAGATCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTTCAGTCCCAGCCCTCTTCTCCCTTCATGTCTCTTCTAGATCTT  700

seq1  CTGCTGGTTTATGTCCATCTTCTTAGTCTATCCCTTGGTCTGTCTCTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGTTTATGTCCATCTTCTTAGTCTATCCCTTGGTCTGTCTCTCCT  750

seq1  GTGGCTCTCCAGTTTCTCCCTGCATCTCTCTTTTATCTCTTCCTATTTCC  800
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTGGCTCTCCAGTTTCTCCCTGCATCTCTCTTTTATCTCTTCCTATTT-C  799

seq1  CCAAATCCTCTCTCATTCTGCTAATGTTCCAAGTCCCCTTTCCTACCTGA  850
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCAAATCCTCTCTCATTCTGCTAATGTTCCAAGTCCCCTTT-CTACCTGA  848

seq1  GATCATTGATCACTGGCTGTTAATTGACAGGTGATGTTTAAAAGAAATTC  900
      ||||||||||||||||||||  ||||||| ||||||||||||   |||||
seq2  GATCATTGATCACTGGCTGT--ATTGACA-GTGATGTTTAAA--GAATTC  893

seq1  TCTCTACACATGATTGTTTTATTTATCT  928
      ||||||||||||| || |||||||||||
seq2  TCTCTACACATGA-TGGTTTATTTATCT  920