BAC Information

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BAC

Clone NameB6Ng01-057E01
ChromosomeX (Build37)
Map Location 160,748,634 - 160,749,658
singlet/doubletsinglet
Overlap genePir
Upstream geneEG637051, Grpr, 1700045I19Rik, Ap1s2, Zrsr2, Car5b, Siah1b, Tmem27, Ace2, Bmx
Downstream geneFigf, Piga, Asb11, Asb9, Mospd2, Fancb, LOC627045, Glra2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057E01.bB6Ng01-057E01.g
ACCDH879178DH879179
length4851,019
definitionDH879178|Mus musculus domesticus DNA, BAC clone: B6Ng01-057E01, 5' end.DH879179|Mus musculus domesticus DNA, BAC clone: B6Ng01-057E01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttcttctactcttactcttgtacctctttttctattgttaccttgttta
tttggagtctactgatcttaactagggttgctggcataagcatagtccag
aattttatttggcaaccaggaatttgggttccttttcttttaagatgctt
atggtttatcttgtagatgctatgaacgttgttattaaacatctctctct
gtctctgtccactctcatctctctcatctcactcttagaagtaaagtaga
aaaaaaaagaaaattcttttcttcttggagcttatatcaggagagagaga
gagagagagagagagatgtgtgtaaacagcgtgtgtggtgtatacgagag
agacaatgagtgtgtatagagagggggggggcacatttgggggggggcga
aaaaatagtggggggtgcgtgtgcgcgcgccccgcgtggagaggtgggga
gacaccctaaaagggggggggggagaaagagaggg
gaattctctatagttttctaaccaaaacattctcctccttctaaaaatac
agtagcaatttcatgccttacagcacatttcagttagaattttaagctat
ttgtattacttattccctatcattagtaatagattatttttaagattaat
tgagatataaacaacatatcattaaagtctaatgcttcaagcaaaaatca
ttatatctggcactgatctgactaatcacatttaatataagtttatcaaa
caattaagaatgtgctccggtcaagatgaagtgctgtatttatagctatt
tccttagcatgttatcatgtcatgagcctcagattttaatgcctcatgca
ggagtctgaagacacattgtgaagctgccctttatttttgcctttagtta
aaatatatttaatatgttcctgaggaaagactcattacattttaaaaatg
caagtcttggcagccatccgagtgagggcaatgaaatgctaacttgcctt
tacaaaacgtaataccttggttcttgatagcttgcattagcattttagtc
taaatttccctgaaaattcgtaagcgtcaccagtaaggccaaggctatat
gaatgctatagaatatatatatagaaggctatatgaatgctatagaatgt
aacttctgactttaaatgcccctatccgttcttctgttgttggcaggcta
gggcttgtcagaaaagatggaatgtacttcctaggtgattaggcagcagg
gacatcttgaagaaataagaacatctggcacccttagtgtacaccgacaa
tggtatttctggggtgatcgggctgccctgggcaagagtaaccttttgta
cagctgatttgaacagatcttgaccactgtttaatttgaacattcctaac
tccaaatgaagtgcaactatggctgctaccataggtcaagctctttgagt
tgttgggtgcatatctttgttgtcttctttttactaaaaatactggcagc
taatttactatctcaacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_160748634_160749658
seq2: B6Ng01-057E01.g_69_1087 (reverse)

seq1  GTGTTGAGAATAGGTAAAATTAGGCTGCCAGTATTTTTAGTAAAAAGAGG  50
      |||||||| ||||   |||||| ||||||||||||||||||||||||| |
seq2  GTGTTGAG-ATAG--TAAATTA-GCTGCCAGTATTTTTAGTAAAAAGAAG  46

seq1  ACACCAAAGATATGCACCCAACAACTTCAAAGAGCTTGACCTATGGTAGG  100
      ||| ||||||||||||||||||||| |||||||||||||||||||||| |
seq2  ACAACAAAGATATGCACCCAACAAC-TCAAAGAGCTTGACCTATGGTA-G  94

seq1  CAGCCATAGTTGGCACTTCATTTGGAGTTAGGAATGTTCAAA-TAAACAG  149
      ||||||||||| |||||||||||||||||||||||||||||| |||||||
seq2  CAGCCATAGTT-GCACTTCATTTGGAGTTAGGAATGTTCAAATTAAACAG  143

seq1  TGGTCAAGATCTGTTCAAATCAGCTGTACAAAAGGTTACTCTTGCCCAGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAAGATCTGTTCAAATCAGCTGTACAAAAGGTTACTCTTGCCCAGG  193

seq1  GCAGCCCGATCACCCCAGAAATACCATTGTCGGTGTACACTAAGGGTGCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCCGATCACCCCAGAAATACCATTGTCGGTGTACACTAAGGGTGCC  243

seq1  AGATGTTCTTATTTCTTCAAGATGTCCCTGCTGCCTAATCACCTAGGAAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTCTTATTTCTTCAAGATGTCCCTGCTGCCTAATCACCTAGGAAG  293

seq1  TACATTCCATCTTTTCTGACAAGCCCTAGCCTGCCAACAACAGAAGAACG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTCCATCTTTTCTGACAAGCCCTAGCCTGCCAACAACAGAAGAACG  343

seq1  GATAGGGGCATTTAAAGTCAGAAGTTACATTCTATAGCATTCATATAGCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGGGCATTTAAAGTCAGAAGTTACATTCTATAGCATTCATATAGCC  393

seq1  TTCTATATATATATTCTATAGCATTCATATAGCCTTGGCCTTACTGGTGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATATATATATTCTATAGCATTCATATAGCCTTGGCCTTACTGGTGA  443

seq1  CGCTTACGAATTTTCAGGGAAATTTAGACTAAAATGCTAATGCAAGCTAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTACGAATTTTCAGGGAAATTTAGACTAAAATGCTAATGCAAGCTAT  493

seq1  CAAGAACCAAGGTATTACGTTTTGTAAAGGCAAGTTAGCATTTCATTGCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACCAAGGTATTACGTTTTGTAAAGGCAAGTTAGCATTTCATTGCC  543

seq1  CTCACTCGGATGGCTGCCAAGACTTGCATTTTTAAAATGTAATGAGTCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCGGATGGCTGCCAAGACTTGCATTTTTAAAATGTAATGAGTCTT  593

seq1  TCCTCAGGAACATATTAAATATATTTTAACTAAAGGCAAAAATAAAGGGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGGAACATATTAAATATATTTTAACTAAAGGCAAAAATAAAGGGC  643

seq1  AGCTTCACAATGTGTCTTCAGACTCCTGCATGAGGCATTAAAATCTGAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCACAATGTGTCTTCAGACTCCTGCATGAGGCATTAAAATCTGAGG  693

seq1  CTCATGACATGATAACATGCTAAGGAAATAGCTATAAATACAGCACTTCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGACATGATAACATGCTAAGGAAATAGCTATAAATACAGCACTTCA  743

seq1  TCTTGACCGGAGCACATTCTTAATTGTTTGATAAACTTATATTAAATGTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGACCGGAGCACATTCTTAATTGTTTGATAAACTTATATTAAATGTG  793

seq1  ATTAGTCAGATCAGTGCCAGATATAATGATTTTTGCTTGAAGCATTAGAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTCAGATCAGTGCCAGATATAATGATTTTTGCTTGAAGCATTAGAC  843

seq1  TTTAATGATATGTTGTTTATATCTCAATTAATCTTAAAAATAATCTATTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGATATGTTGTTTATATCTCAATTAATCTTAAAAATAATCTATTA  893

seq1  CTAATGATAGGGAATAAGTAATACAAATAGCTTAAAATTCTAACTGAAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGATAGGGAATAAGTAATACAAATAGCTTAAAATTCTAACTGAAAT  943

seq1  GTGCTGTAAGGCATGAAATTGCTACTGTATTTTTAGAAGGAGGAGAATGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTAAGGCATGAAATTGCTACTGTATTTTTAGAAGGAGGAGAATGT  993

seq1  TTTGGTTAGAAAACTATAGAGAATTC  1025
      ||||||||||||||||||||||||||
seq2  TTTGGTTAGAAAACTATAGAGAATTC  1019