BAC Information

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BAC

Clone NameB6Ng01-058L08
ChromosomeX (Build37)
Map Location 112,426,720 - 112,558,291
singlet/doubletdoublet
Overlap geneLOC100039255, LOC623913
Upstream geneLOC100039201, Klhl4, Gm1866, EG546361, EG237009, 4930524E20Rik, LOC237008, EG664969, EG546362
Downstream geneLOC546363, LOC100039277
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058L08.bB6Ng01-058L08.g
ACCDH880212DH880213
length1,154784
definitionDH880212|Mus musculus domesticus DNA, BAC clone: B6Ng01-058L08, 5' end.DH880213|Mus musculus domesticus DNA, BAC clone: B6Ng01-058L08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,557,116 - 112,558,291)(112,426,720 - 112,427,502)
sequence
gaattcttgtagctagatatctatagctgccctgaattatttcattataa
aagattgtttggttattgttatatttgatccccgaagtgactcccaaact
atgataataaattccattgggtttggaactgtagataaatcaactccctg
ttacttgctatcaaaaatatattgataatgatggtggtggcagtgatgat
gatgatgatgatatgcccatagtttagaattagggtaaagcactgaattt
cctgcctaaaaataaattcaaaggatggttgaatgatatttcaatgcttt
cttttgcatcaaatgaggatttgtcaatttactaatttgcctgtattttg
ttttgttttgtttttgccttaggcttgaaatttctgtttgtggtcttcaa
tgtttacccattaatgtaagccagtaaaatacttgtaaacaaatattaag
gctttcctggttttgaaaaaaagaactttgcacctaggaaaaataccatc
cttcatataaattgtttttaaaatttggcgtctggctcccactctcacag
ctattgcagtatattgagctctatagagacagcgccagggcaagcaagac
ctgaacggttactgggcaactctgtgccgcgaggaggttaatcaactaaa
catgggcaaaggagatcctaagaagcctagaggcaaaatgttctcatatg
tattctttgtgcaaacctgccaggaggagcacaagaaaaagcacccggat
gcttctgtcaacttcttagagttctccaagaagtgctcagagaggtggaa
gaccatgtcagctaaagaaaagaggaaatttgaagacatggcaaagtctg
acaaggctcattatgaaagaaaaatgaaaacctacatcctgcccccaaag
gggagaccaaaagaagttcaaggaccccatgcacccaaaggcctccttca
gcctctctgtatgttcttaggtgccacctcaaatcaaagtgaccatcctg
gcttatccattggtggtgtttgcaaagaacaagagaatgtgggacacact
ggctgtggatgacaagcagccccatgaaaagaaactgccaagtgggaaga
tgaagggaatgctgctacagctaaaggaaacctgatgcacgaaagtgggg
tgtg
gaattctatgagagaaatccaggaggaggagatatctggcatgtaaataa
attaaattaataattactggaaaagaaaagaaggaaatatttaaatgttt
catttttttcttatctaagtgtgtgcttttgcatttttctgtggatattt
tcatataagtgaaggacagaagaaggtataagattccctggagttggaga
tatggagagttggagtcatttggaatgggtgctgggaaaaaatccaggtt
ctgtgaaagagttgtaactgttctgaacttctgagttataatttaatttt
tgcccatgagcatgggcaatctttccattttctgatatctttttcaattt
ctttcttcagagacttgaagttgtttcactttcttggttagagttactcc
aagatatattatattatttgtgactattgtgaagcttgttgtttctctac
attttttctaaacctgtatattatttgtataaaggaaggctactattttt
gtttgtttgttgttgttgttgttgttgttgttgagttaattttacatcca
tccactttgcttaaagtgtttgttagctctgatagattatttgggatcac
ttatgtatactttcctctatcatcagtgaaaagctcatgtctccttcttc
agcatgttcttactttgcatgcacccccacacccagcctcccattgaata
tgaggaatcatctcagaatgggtcaaaaaaaattaagagtcagagggagt
gtacctctgcaactaaataatttccagatacgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_112557116_112558291
seq2: B6Ng01-058L08.b_43_1196 (reverse)

seq1  CACACCCACCTTTTTCGCTGCATCAGGTTTTCCTTTAGCTCTGTAGGCAG  50
      ||||||  ||  ||||| ||||||||| ||||||||||  ||||| ||||
seq2  CACACC--CCACTTTCG-TGCATCAGG-TTTCCTTTAG--CTGTA-GCAG  43

seq1  CAATATCCTTCTACTTCTCCAACTTGGCAGTTTTCTTCTCATAGGGCTGC  100
      | ||  |||||  ||  ||| ||||||||| |||||| |||| |||||||
seq2  C-ATTCCCTTCATCT--TCCCACTTGGCAG-TTTCTTTTCATGGGGCTGC  89

seq1  TTGTCATCCACAG-CAGTGTTGTTCCACA-TCTCTTCTAGTTTCTTTGC-  147
      ||||||||||||| ||||| ||| ||||| ||||||     |||||||| 
seq2  TTGTCATCCACAGCCAGTG-TGTCCCACATTCTCTT----GTTCTTTGCA  134

seq1  AACATCACCAATGGATAAGCCAGGATGGTCACCTTTGATTTTGGGGTGGC  197
      |||| |||||||||||||||||||||||||| |||||| |||| ||||||
seq2  AACACCACCAATGGATAAGCCAGGATGGTCA-CTTTGA-TTTGAGGTGGC  182

seq1  A-CTAAGAACATAACAAGAAGAAGGCTGAAGGAGGCCTTTTGGGTGCAAT  246
      | |||||||||||   ||    ||||||||||||||| ||||||||| ||
seq2  ACCTAAGAACATACAGAG----AGGCTGAAGGAGGCC-TTTGGGTGC-AT  226

seq1  GGGGTCCTTGAACTTCTTTTTGGTCTCCCCTTTGGGGGGCAGGATGTAGG  296
      |||||||||||||||| |||||||||||||||| ||||||||||||||||
seq2  GGGGTCCTTGAACTTC-TTTTGGTCTCCCCTTT-GGGGGCAGGATGTAGG  274

seq1  TTTTCATTTTTCTTTCATAATGAGCCTTGTCAGACTTTGCCATGTCTTCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTTTTCTTTCATAATGAGCCTTGTCAGACTTTGCCATGTCTTCA  324

seq1  AATTTCCTCTTTTCTTTAGCTGACATGGTCTTCCACCTCTCTGAGCACTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCTCTTTTCTTTAGCTGACATGGTCTTCCACCTCTCTGAGCACTT  374

seq1  CTTGGAGAACTCTAAGAAGTTGACAGAAGCATCCGGGTGCTTTTTCTTGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGAACTCTAAGAAGTTGACAGAAGCATCCGGGTGCTTTTTCTTGT  424

seq1  GCTCCTCCTGGCAGGTTTGCACAAAGAATACATATGAGAACATTTTGCCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTCCTGGCAGGTTTGCACAAAGAATACATATGAGAACATTTTGCCT  474

seq1  CTAGGCTTCTTAGGATCTCCTTTGCCCATGTTTAGTTGATTAACCTCCTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCTTCTTAGGATCTCCTTTGCCCATGTTTAGTTGATTAACCTCCTC  524

seq1  GCGGCACAGAGTTGCCCAGTAACCGTTCAGGTCTTGCTTGCCCTGGCGCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCACAGAGTTGCCCAGTAACCGTTCAGGTCTTGCTTGCCCTGGCGCT  574

seq1  GTCTCTATAGAGCTCAATATACTGCAATAGCTGTGAGAGTGGGAGCCAGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTATAGAGCTCAATATACTGCAATAGCTGTGAGAGTGGGAGCCAGA  624

seq1  CGCCAAATTTTAAAAACAATTTATATGAAGGATGGTATTTTTCCTAGGTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCAAATTTTAAAAACAATTTATATGAAGGATGGTATTTTTCCTAGGTG  674

seq1  CAAAGTTCTTTTTTTCAAAACCAGGAAAGCCTTAATATTTGTTTACAAGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTCTTTTTTTCAAAACCAGGAAAGCCTTAATATTTGTTTACAAGT  724

seq1  ATTTTACTGGCTTACATTAATGGGTAAACATTGAAGACCACAAACAGAAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACTGGCTTACATTAATGGGTAAACATTGAAGACCACAAACAGAAA  774

seq1  TTTCAAGCCTAAGGCAAAAACAAAACAAAACAAAATACAGGCAAATTAGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGCCTAAGGCAAAAACAAAACAAAACAAAATACAGGCAAATTAGT  824

seq1  AAATTGACAAATCCTCATTTGATGCAAAAGAAAGCATTGAAATATCATTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGACAAATCCTCATTTGATGCAAAAGAAAGCATTGAAATATCATTC  874

seq1  AACCATCCTTTGAATTTATTTTTAGGCAGGAAATTCAGTGCTTTACCCTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCCTTTGAATTTATTTTTAGGCAGGAAATTCAGTGCTTTACCCTA  924

seq1  ATTCTAAACTATGGGCATATCATCATCATCATCATCACTGCCACCACCAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAAACTATGGGCATATCATCATCATCATCATCACTGCCACCACCAT  974

seq1  CATTATCAATATATTTTTGATAGCAAGTAACAGGGAGTTGATTTATCTAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATCAATATATTTTTGATAGCAAGTAACAGGGAGTTGATTTATCTAC  1024

seq1  AGTTCCAAACCCAATGGAATTTATTATCATAGTTTGGGAGTCACTTCGGG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAAACCCAATGGAATTTATTATCATAGTTTGGGAGTCACTTCGGG  1074

seq1  GATCAAATATAACAATAACCAAACAATCTTTTATAATGAAATAATTCAGG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAATATAACAATAACCAAACAATCTTTTATAATGAAATAATTCAGG  1124

seq1  GCAGCTATAGATATCTAGCTACAAGAATTC  1176
      ||||||||||||||||||||||||||||||
seq2  GCAGCTATAGATATCTAGCTACAAGAATTC  1154

seq1: chrX_112426720_112427502
seq2: B6Ng01-058L08.g_68_851

seq1  GAATTCTATGAGAGAAATCCAGGAGGAGGAGATATCTGGCATGTAAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGAGAGAAATCCAGGAGGAGGAGATATCTGGCATGTAAATAA  50

seq1  ATTAAATTAATAATTACTGGAAAAGAAAAGAAGGAAATATTTAAATGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATTAATAATTACTGGAAAAGAAAAGAAGGAAATATTTAAATGTTT  100

seq1  CATTTTTTTCTTATCTAAGTGTGTGCTTTTGCATTTTTCTGTGGATATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTTCTTATCTAAGTGTGTGCTTTTGCATTTTTCTGTGGATATTT  150

seq1  TCATATAAGTGAAGGACAGAAGAAGGTATAAGATTCCCTGGAGTTGGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAAGTGAAGGACAGAAGAAGGTATAAGATTCCCTGGAGTTGGAGA  200

seq1  TATGGAGAGTTGGAGTCATTTGGAATGGGTGCTGGGAAAAAATCCAGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAGAGTTGGAGTCATTTGGAATGGGTGCTGGGAAAAAATCCAGGTT  250

seq1  CTGTGAAAGAGTTGTAACTGTTCTGAACTTCTGAGTTATAATTTAATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAAAGAGTTGTAACTGTTCTGAACTTCTGAGTTATAATTTAATTTT  300

seq1  TGCCCATGAGCATGGGCAATCTTTCCATTTTCTGATATCTTTTTCAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATGAGCATGGGCAATCTTTCCATTTTCTGATATCTTTTTCAATTT  350

seq1  CTTTCTTCAGAGACTTGAAGTTGTTTCACTTTCTTGGTTAGAGTTACTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTCAGAGACTTGAAGTTGTTTCACTTTCTTGGTTAGAGTTACTCC  400

seq1  AAGATATATTATATTATTTGTGACTATTGTGAAGCTTGTTGTTTCTCTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATATTATATTATTTGTGACTATTGTGAAGCTTGTTGTTTCTCTAC  450

seq1  ATTTTTTCTAAACCTGTATATTATTTGTATAAAGGAAGGCTACTATTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTCTAAACCTGTATATTATTTGTATAAAGGAAGGCTACTATTTTT  500

seq1  GTTTGTTTGTTGTTGTTGTTGTTGTTGTTGTTGAGTTAATTTTACATCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGTTGTTGTTGTTGTTGTTGTTGTTGAGTTAATTTTACATCCA  550

seq1  TCCACTTTGCTTAAAGTGTTTGTTAGCTCTGATAGATTATTTGGGATCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTTGCTTAAAGTGTTTGTTAGCTCTGATAGATTATTTGGGATCAC  600

seq1  TTATGTATAC-TTCCTCTATCATCAGTGAAAAGCTCATGTCTCCTTCTTC  649
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTATGTATACTTTCCTCTATCATCAGTGAAAAGCTCATGTCTCCTTCTTC  650

seq1  AGCATGTTC-TAC-TTGCATGCACCCCCACACCCAGCCTCCCATTGAATA  697
      ||||||||| ||| ||||||||||||||||||||||||||||||||||||
seq2  AGCATGTTCTTACTTTGCATGCACCCCCACACCCAGCCTCCCATTGAATA  700

seq1  TGAGGAATCATCTCAGAAATGGGTCAAAAAAAAATTAAGAGTCAGAGGTA  747
      |||||||||||||||| |||||||| |||||||||||||||||||||| |
seq2  TGAGGAATCATCTCAG-AATGGGTC-AAAAAAAATTAAGAGTCAGAGGGA  748

seq1  GTGTACCTCTGCAACTAAATATTTCCTAGATACGAC  783
      ||||||||||||||||||||| || | |||||||||
seq2  GTGTACCTCTGCAACTAAATAATTTCCAGATACGAC  784