BAC Information

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BAC

Clone NameB6Ng01-059F17
ChromosomeX (Build37)
Map Location 38,373,888 - 38,494,454
singlet/doubletdoublet
Overlap genenone
Upstream geneEG245391, LOC100039769
Downstream geneLOC385344, Gria3, LOC100039802, LOC676077, Thoc2, LOC665488, EG333830, LOC100039838, Birc4
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059F17.bB6Ng01-059F17.g
ACCDH880665DH880666
length5231,089
definitionDH880665|Mus musculus domesticus DNA, BAC clone: B6Ng01-059F17, 5' end.DH880666|Mus musculus domesticus DNA, BAC clone: B6Ng01-059F17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,493,926 - 38,494,454)(38,373,888 - 38,375,000)
sequence
ttagcatagtagcttttctttaataaagtagacttactgcttcataaatt
aaaggtgatctaggcttgaattctgccttcttgttcagctacttgactct
agaaaagttatacactatctctgagacagcttttctttcagcaaaatgga
gataatagtacctgttgacatggtgatcttgttgcaaaatgatgctatat
tagtccagtagctgaaagaatatctgacactcactgtatgttgttcttag
taatagtaactacaataaaataatacttgtaagacatttaattgtattac
ttttaatttccatgttgtcctatgaattactgattattgattacctactt
aataatgttatataatcaacaaatattctgaaagattcccctttgtttct
agaagtttatcaggaagtacacagaaagaaattgacacatctctaaattt
gctttcaatatggttaggaagttaaaatatttgggtatatagtgatggag
gaagggtctgggaggaattggga
gaattctctatactcaggtgcttacacttgtagaaatgatgagtttcatt
gtaatattcatttattatctctatatgtggtagtctggatgagaatagta
tccaaaggctcatatgcttagatgcttgatccccagttgttagagcattt
ggggaaggatcagaaggaatgtctttattggaggaggtatgtcacgggat
gcaagacttgagatttcaaaatctcatgtcactcaaaattagtctcgtgt
tcattctgtagatcagaatgtaagctctcaactacttttccaccacaatg
cctggctgtgtacttcctgctcttcactgtgatacacatggaatctaacc
ctcttaaatcatgaactatatggttatagtgttttaacacatcagtatag
aaataactaagagaggagttggcactacaagtgggttatttcttaggctt
gaccatgctctttattgcatgaatgtggaagactttgggactctatacta
ggaaagcagttaaaacattgcaaggcttaatgggcgattctactagaaac
ttggaagacaagagtgctaagaacaatctgggatattgaggcccaacaca
agaacatttgctggggaatattggaacccgggctagaccattcttgtcat
attttggcaaacaatgtgtctgctttttgtgcttctcttaagactttact
tgatgctaaattgaatcattttggaccaattttactggcagaggagattt
caaggcagcctaatattgactatgttgcaaggttatttagtagtaatctc
tcttattcaaatccacagtgaaaaataccaagtagagtaaaaaagaaata
taaaaatataaacttctaggtgaaatgttccagaaaattaaatgctagat
tcaaaggttgtactgaaagacaagagagacttgatgagaaatgaataagg
gagttgtagctcccctggtattcagactatcagcttcacaggtagactaa
actcacttatacccagcataccagatcctgtgaccagagcagatttcagc
cagctgggagctgccttctgttccactgtggctgggaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_38493926_38494454
seq2: B6Ng01-059F17.b_47_575 (reverse)

seq1  TCCCAATTCCTCCCAGACCCTTCCTCCATCACTATATACCCAAATATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATTCCTCCCAGACCCTTCCTCCATCACTATATACCCAAATATTTT  50

seq1  AACTTCCTAACCATATTGAAAGCAAATTTAGAGATGTGTCAATTTCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCCTAACCATATTGAAAGCAAATTTAGAGATGTGTCAATTTCTTTC  100

seq1  TGTGTACTTCCTGATAAACTTCTAGAAACAAAGGGGAATCTTTCAGAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACTTCCTGATAAACTTCTAGAAACAAAGGGGAATCTTTCAGAATA  150

seq1  TTTGTTGATTATATAACATTATTAAGTAGGTAATCAATAATCAGTAATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGATTATATAACATTATTAAGTAGGTAATCAATAATCAGTAATTC  200

seq1  ATAGGACAACATGGAAATTAAAAGTAATACAATTAAATGTCTTACAAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGACAACATGGAAATTAAAAGTAATACAATTAAATGTCTTACAAGTA  250

seq1  TTATTTTATTGTAGTTACTATTACTAAGAACAACATACAGTGAGTGTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATTGTAGTTACTATTACTAAGAACAACATACAGTGAGTGTCAG  300

seq1  ATATTCTTTCAGCTACTGGACTAATATAGCATCATTTTGCAACAAGATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTTTCAGCTACTGGACTAATATAGCATCATTTTGCAACAAGATCA  350

seq1  CCATGTCAACAGGTACTATTATCTCCATTTTGCTGAAAGAAAAGCTGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTCAACAGGTACTATTATCTCCATTTTGCTGAAAGAAAAGCTGTCT  400

seq1  CAGAGATAGTGTATAACTTTTCTAGAGTCAAGTAGCTGAACAAGAAGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATAGTGTATAACTTTTCTAGAGTCAAGTAGCTGAACAAGAAGGCA  450

seq1  GAATTCAAGCCTAGATCACCTTTAATTTATGAAGCAGTAAGTCTACTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGCCTAGATCACCTTTAATTTATGAAGCAGTAAGTCTACTTTA  500

seq1  TTAAAGAAAAGCTACTATGCTAAGAATTC  529
      |||||||||||||||||||||||||||||
seq2  TTAAAGAAAAGCTACTATGCTAAGAATTC  529

seq1: chrX_38373888_38375000
seq2: B6Ng01-059F17.g_68_1156

seq1  GAATTCTCTATACTCAGGTGCTTACACTTGTAGAAATGATGAGTTTCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATACTCAGGTGCTTACACTTGTAGAAATGATGAGTTTCATT  50

seq1  GTAATATTCATTTATTATCTCTATATGTGGTAGTCTGGATGAGAATAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATATTCATTTATTATCTCTATATGTGGTAGTCTGGATGAGAATAGTA  100

seq1  TCCAAAGGCTCATATGCTTAGATGCTTGATCCCCAGTTGTTAGAGCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGGCTCATATGCTTAGATGCTTGATCCCCAGTTGTTAGAGCATTT  150

seq1  GGGGAAGGATCAGAAGGAATGTCTTTATTGGAGGAGGTATGTCACGGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGGATCAGAAGGAATGTCTTTATTGGAGGAGGTATGTCACGGGAT  200

seq1  GCAAGACTTGAGATTTCAAAATCTCATGTCACTCAAAATTAGTCTCGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGACTTGAGATTTCAAAATCTCATGTCACTCAAAATTAGTCTCGTGT  250

seq1  TCATTCTGTAGATCAGAATGTAAGCTCTCAACTACTTTTCCACCACAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTGTAGATCAGAATGTAAGCTCTCAACTACTTTTCCACCACAATG  300

seq1  CCTGGCTGTGTACTTCCTGCTCTTCACTGTGATACACATGGAATCTAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTGTGTACTTCCTGCTCTTCACTGTGATACACATGGAATCTAACC  350

seq1  CTCTTAAATCATGAACTATATGGTTATAGTGTTTTAACACATCAGTATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAAATCATGAACTATATGGTTATAGTGTTTTAACACATCAGTATAG  400

seq1  AAATAACTAAGAGAGGAGTTGGCACTACAAGTGGGTTATTTCTTAGGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACTAAGAGAGGAGTTGGCACTACAAGTGGGTTATTTCTTAGGCTT  450

seq1  GACCATGCTCTTTATTGCATGAATGTGGAAGACTTTGGGACTCTATACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATGCTCTTTATTGCATGAATGTGGAAGACTTTGGGACTCTATACTA  500

seq1  GGAAAGCAGTTAAAACATTGCAAGGCTTAATGGGCGATTCTACTAGAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGCAGTTAAAACATTGCAAGGCTTAATGGGCGATTCTACTAGAAAC  550

seq1  TTGGAAGACAAGAGTGCTAAGAACAATCTGGGATATTGAGGCCCAACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGACAAGAGTGCTAAGAACAATCTGGGATATTGAGGCCCAACACA  600

seq1  AGAACATTTGCTGGGGAATATTGGAACCCGGGCTAGACCATTCTTGTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATTTGCTGGGGAATATTGGAACCCGGGCTAGACCATTCTTGTCAT  650

seq1  ATTTTGGCAAACAATGTGTCTGCTTTTTGTGCTTCTCTTAAGACTTTACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGCAAACAATGTGTCTGCTTTTTGTGCTTCTCTTAAGACTTTACT  700

seq1  TGATGCTAAATTGAATCATTTTGGACCAATTTTACTGGCAGAGGAGATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCTAAATTGAATCATTTTGGACCAATTTTACTGGCAGAGGAGATTT  750

seq1  CAAGGCAGCCTAATATTGACTATGTTGCAAGGTTATTTAGTAGTAATCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAGCCTAATATTGACTATGTTGCAAGGTTATTTAGTAGTAATCTC  800

seq1  TCTTATTCAAATCCACAGTGAAAAATACCAAGTAGAGTAAAAAAGAAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTCAAATCCACAGTGAAAAATACCAAGTAGAGTAAAAAAGAAATA  850

seq1  TAAAAATATAAACTTCTAGGTGAAAAATGTTCCAGAAAATTAAATGCTAG  900
      ||||||||||||||||||||||  ||||||||||||||||||||||||||
seq2  TAAAAATATAAACTTCTAGGTG--AAATGTTCCAGAAAATTAAATGCTAG  898

seq1  ATTCAAAGGTTGTACTGAAAGACAAGGAGAGACCTGATGAGAAATTGAAT  950
      ||||||||||||||||||||||||| ||||||| |||||||||| |||||
seq2  ATTCAAAGGTTGTACTGAAAGACAA-GAGAGACTTGATGAGAAA-TGAAT  946

seq1  AAAGGGAGTTGTAGCTCCCCTGGTATTCAGACATATCCAGCTTCACAGGT  1000
       ||||||||||||||||||||||||||||||| ||| |||||||||||||
seq2  -AAGGGAGTTGTAGCTCCCCTGGTATTCAGAC-TAT-CAGCTTCACAGGT  993

seq1  AAGACCTAAAACCTCACCCTTATACCCAGCATACCAGGATCCCTGTGACC  1050
       ||| |||||  ||||  |||||||||||||||||| ||| |||||||||
seq2  -AGA-CTAAA--CTCA--CTTATACCCAGCATACCA-GAT-CCTGTGACC  1035

seq1  CAAGGAAGCAGATTTCCAGCCCAGCTGGAGACCTGCCTTCTGGTTCACAC  1100
        ||  ||||||||| ||| |||||||| || |||||||||| | ||   
seq2  --AG--AGCAGATTT-CAG-CCAGCTGG-GAGCTGCCTTCTGTTCCA---  1075

seq1  CTGT-GCTGGGAAC  1113
      |||| |||||||||
seq2  CTGTGGCTGGGAAC  1089