BAC Information

Click to search

BAC

Clone NameB6Ng01-061B02
ChromosomeX (Build37)
Map Location 77,809,221 - 77,810,350
singlet/doubletsinglet
Overlap genenone
Upstream gene2410003J06Rik, LOC667749, LOC211702, LOC667755, LOC211705, LOC654474, LOC629153, LOC546338, LOC100042229, LOC667776
Downstream geneEG629182, Tmem47, LOC100041462, LOC100041474, 4930595M18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061B02.bB6Ng01-061B02.g
ACCDH881855DH881856
length1,1201,023
definitionDH881855|Mus musculus domesticus DNA, BAC clone: B6Ng01-061B02, 5' end.DH881856|Mus musculus domesticus DNA, BAC clone: B6Ng01-061B02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttaaataaaggaatagtaacagttactttgagacctttttta
ttgttttgtgaatttatctcttttcagaatctggtaacaaggcaagtaaa
ctgtctcagctaggttcctagtagctctagataagtgagatctaaggcct
ggattttttatcatatgaagagaactgagaaggcagaaaaactaagaagg
cagttgaatccttggcagaggagctaggtgcttgatactgctaaagccag
tcagtcaatatcacctagaaagaataaattatagcaggaaatataatcta
atgttctatggcaaaggcttacttattacctagatggctctcctatgctc
ccatacatcatttgcttgtgtaataggagaagttgttaaaatctgcaaga
aattggaactaaagtgtggccatctttgaccattgacctatattgagacc
aagcaattttcagtaagacaatgaggctttaagaaaaattctcagtctga
gaaaggaattcaatccaaggagaaaagaagggtgggtcacaaaaagaaca
cttccattgggagactaatgcagctaagagacagagacaaggaggaacaa
gcagtaactccacccaattgagggttccaatatcacagaaaccacaaggg
cttagagaagcagcaggacatttcacatagatcttgggggtgaggagcaa
gaaatcctgcaacatgtgggcctaggacagtacaagaaaatgatagaaca
aatagctccaaggaaaaggggtcaatgaaaaagctacacactcaagagca
tgtaggcagctcctatagggaggtgagcaagttccatgaaggaactgaga
ggagtcatgaatgaccagagtggataaatgtcatggtaacaaaaatttca
atctagggcaacgataaacagattaagagattgtcattgagaaatgtctc
aaatcacagagcagaggacagtatgagggccagcatgatgagaagcttac
tggcatacagtatggctttgtaataagtagacaaagcagacagttgcata
gtgacacttagacagtaaagaggagagactatggatagatggaaaatacc
ttggagaggttcaaaggcaa
gaattccatgaccgtgggctccctgtcgcacttctctggctttgaaatga
gttccttggtcagaagcaatactgtgtggaataagatgatgatagataag
tcattctgtcagtccgtggatggtggttttagcagaggtattacatgcag
gaaaggcaaatcaataactagaataagtatatagtccagtaaaaacaaag
cactgtcctttcaacgaaggaagtggtccagtgtagtcaacctgccacca
ggttgctggctggacacctcgaggagtggtgccatatctggggctcagtg
ttggtttttcctgttggcagatctggcattcagcagcagctgtagccagg
tcaactttggtgagtggaagtccattttgctgagcccaagcataacctcc
atcttgaccaccatggccactttgttcatgtgcccattgagcaatgacag
ggatgtctgggaagagaggttgactgtccacagaaagggtcatcttatcc
acttgattattgaactcctcctcggctgaagtcaccttttggtgagcatt
tacatgggacacaaatatcttcacatcctttgcccatttggagagattta
tccaaatcttccccagatgtctttctcaccaattttccaattatgatctt
tccaagtccctgtccatccagccaatctattggctacagcccatgagtca
gtgaataatcatacatctggccatttcttcgtacaaacaaactgtaatac
cacgtgtactgctcgaagttctgcccactgtaaagatttcccttcacctg
tgtctttcagggttgtcccaaaaaggggttgtaaatgctgcagctgtcca
ctttctgggttggtaccttgtataatgttcagagcatcaataaaaccagg
ccctagtcttcttctcttcagtcagctgatcatagggaatatcccatgag
gctataagcacctgcttggcagcgaatggcattttgtaacagcggttaaa
acataaggcttttcagtaacttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_77809221_77810350
seq2: B6Ng01-061B02.b_47_1166 (reverse)

seq1  TTGCCTTTTGTACCTCTCC-AGGTATTTTCTCATCTATCCATTTGTCTCT  49
      ||||| |||| |||||||| |||||||||| |||||||||| | ||||||
seq2  TTGCC-TTTGAACCTCTCCAAGGTATTTTC-CATCTATCCA-TAGTCTCT  47

seq1  CCTCTTTTACTGTCTAAGTGTCACTATGCAACTGTCTGCTTTGTCTACTT  99
      |||| |||||||||||||||||||||||||||||||||||||||||||  
seq2  CCTC-TTTACTGTCTAAGTGTCACTATGCAACTGTCTGCTTTGTCTAC--  94

seq1  TTATTACAAAAGCCATACTGGTATGCCAGTAAGCTTCTCATCATGCTGGG  149
      ||||||| ||||||||||| ||||||||||||||||||||||||||| ||
seq2  TTATTAC-AAAGCCATACT-GTATGCCAGTAAGCTTCTCATCATGCT-GG  141

seq1  CCCTCATTACTTGTCCTCTGCTCTGTGATTTGAGACATTTCTCAATGACA  199
      |||||| ||| |||||||||||||||||||||||||||||||||||||| 
seq2  CCCTCA-TAC-TGTCCTCTGCTCTGTGATTTGAGACATTTCTCAATGAC-  188

seq1  AATCTCTTAATCTGTTTATCGTTGCCCTAGATTGAAATTTTTGTTACCAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTTAATCTGTTTATCGTTGCCCTAGATTGAAATTTTTGTTACCAT  238

seq1  GACATTTATCCACTCTGGTCATTCATGACTCCTCTCAGTTCCTTCATGGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTATCCACTCTGGTCATTCATGACTCCTCTCAGTTCCTTCATGGA  288

seq1  ACTTGCTCACCTCCCTATAGGAGCTGCCTACATGCTCTTGAGTGTGTAGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTCACCTCCCTATAGGAGCTGCCTACATGCTCTTGAGTGTGTAGC  338

seq1  TTTTTCATTGACCCCTTTTCCTTGGAGCTATTTGTTCTATCA-TTTCTTG  398
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTTTCATTGACCCCTTTTCCTTGGAGCTATTTGTTCTATCATTTTCTTG  388

seq1  TACTGTCCTAGGCCCACATGTTGCAGGATTTCTTGCTCCTCACCCCCAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTCCTAGGCCCACATGTTGCAGGATTTCTTGCTCCTCACCCCCAAG  438

seq1  ATCTATGTGAAATGTCCTGCTGCTTCTCTAAGCCCTTGTGGTTTCTGTGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATGTGAAATGTCCTGCTGCTTCTCTAAGCCCTTGTGGTTTCTGTGA  488

seq1  TATTGGAACCCTCAATTGGGTGGAGTTACTGCTTGTTCCTCCTTGTCTCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGAACCCTCAATTGGGTGGAGTTACTGCTTGTTCCTCCTTGTCTCT  538

seq1  GTCTCTTAGCTGCATTAGTCTCCCAATGGAAGTGTTCTTTTTGTGACCCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTAGCTGCATTAGTCTCCCAATGGAAGTGTTCTTTTTGTGACCCA  588

seq1  CCCTTCTTTTCTCCTTGGATTGAATTCCTTTCTCAGACTGAGAATTTTTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTTTTCTCCTTGGATTGAATTCCTTTCTCAGACTGAGAATTTTTC  638

seq1  TTAAAGCCTCATTGTCTTACTGAAAATTGCTTGGTCTCAATATAGGTCAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCCTCATTGTCTTACTGAAAATTGCTTGGTCTCAATATAGGTCAA  688

seq1  TGGTCAAAGATGGCCACACTTTAGTTCCAATTTCTTGCAGATTTTAACAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAAAGATGGCCACACTTTAGTTCCAATTTCTTGCAGATTTTAACAA  738

seq1  CTTCTCCTATTACACAAGCAAATGATGTATGGGAGCATAGGAGAGCCATC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCTATTACACAAGCAAATGATGTATGGGAGCATAGGAGAGCCATC  788

seq1  TAGGTAATAAGTAAGCCTTTGCCATAGAACATTAGATTATATTTCCTGCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAATAAGTAAGCCTTTGCCATAGAACATTAGATTATATTTCCTGCT  838

seq1  ATAATTTATTCTTTCTAGGTGATATTGACTGACTGGCTTTAGCAGTATCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTATTCTTTCTAGGTGATATTGACTGACTGGCTTTAGCAGTATCA  888

seq1  AGCACCTAGCTCCTCTGCCAAGGATTCAACTGCCTTCTTAGTTTTTCTGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTAGCTCCTCTGCCAAGGATTCAACTGCCTTCTTAGTTTTTCTGC  938

seq1  CTTCTCAGTTCTCTTCATATGATAAAAAATCCAGGCCTTAGATCTCACTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCAGTTCTCTTCATATGATAAAAAATCCAGGCCTTAGATCTCACTT  988

seq1  ATCTAGAGCTACTAGGAACCTAGCTGAGACAGTTTACTTGCCTTGTTACC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGAGCTACTAGGAACCTAGCTGAGACAGTTTACTTGCCTTGTTACC  1038

seq1  AGATTCTGAAAAGAGATAAATTCACAAAACAATAAAAAAGGTCTCAAAGT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCTGAAAAGAGATAAATTCACAAAACAATAAAAAAGGTCTCAAAGT  1088

seq1  AACTGTTACTATTCCTTTATTTAAAAGAATTC  1130
      ||||||||||||||||||||||||||||||||
seq2  AACTGTTACTATTCCTTTATTTAAAAGAATTC  1120