BAC Information

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BAC

Clone NameB6Ng01-064N16
ChromosomeX (Build37)
Map Location 135,245,629 - 135,246,684
singlet/doubletsinglet
Overlap geneIl1rapl2
Upstream gene1700025D03Rik
Downstream geneNrk, Serpina7, 4930513O06Rik, 4933428M09Rik, Mum1l1, LOC675062, Trap1a, C330013F16Rik, EG666359, D330045A20Rik, Rnf128, LOC622432, Tbc1d8b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064N16.bB6Ng01-064N16.g
ACCDH884518DH884519
length9071,033
definitionDH884518|Mus musculus domesticus DNA, BAC clone: B6Ng01-064N16, 5' end.DH884519|Mus musculus domesticus DNA, BAC clone: B6Ng01-064N16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaagaatattgaatagctgagaagcacctaaagaaatg
ttcaacctcctgaatcatcagggaaatgcaaatcaaatcaacactgaaat
tccagctcacacctgtcagaatgtgtaaaatcaaaagctcaggtgacagc
agatgctggggaagatgtagagaaagaagaacactcctccattgcttgtg
ggattgcaaggtggtacaaaccctctggaaatcagtatggcagttcctca
gaaaattagacataatctgcagacccactaataccactcctgggcatata
cccagaagatgctccaacatgtaataaggacacatgctccactatgttca
tagcagccatatttataatagccagaagctggaaagaacccagatgtcct
tcaacagaggaatggatacaaaaatgtggttcattggcacaatggcgtac
tactcagctattttcttaaatgacttcatgaaacttttaggcaaatgaat
ggaactagaaaatattatccagtgtgaggtaacccagccacaaaagaaca
cacactcactgataagtggatattagccccaaaagctcagaaaaaccatt
ggacagagcacaaggtccccagtggaggagttagagaaaggacagaagga
gttgaaggggtttgcaaccccataggaagaacaacaaatcaaccaaccag
acccccagagttcacagggactaaaccaccagccaaagagtacacattgc
tccaaagagtacctagagctccagccacatatgtagcagaggatggccat
gtcagacatcaatgggaggggaagcccttggtactgtgaatctcaatgcc
ctattgtacggaaattccagatatggaggcagaattgggtagtgagtgta
aggggcc

gaattccacttcgtctctgtttttttttttttcttatgtcaagttgttcc
tattctgaaatgtgttcaactccaagagcctgttaaggctgcctattatc
tctgctaatacatgcttaacctacctgtctttggacaacctaaggatttt
cagagaatttaagtaaagcactcctaaagcacctggaaattcagattaac
aaatgttgggagagattctgatacactgaatttatgtttctctttggagc
gattacccactgtagaatatgtgagtcactctaaacgtctatcggcagat
tcaacacttgacctgatgtttgagtctaggagatcacttattttggcttt
ttactgtttcaactcacctggagctttcttctctcaagcaatgccacagt
gagaaccaggaaatgaaagggatacaaacagaaaaagaagtcaaactata
cctattttcaaatgatatgctatcattcataacagaccccaaaatatcta
ctgaaagctcctagaaacaatgagcaatttcaggaatgtggcaggatata
gaagcaacttgtagaaatcaattgtttctctataaatcaacaacacagag
aaagtgatcacggatgcactttattcacagtaaggtaaaagtaaataaag
tatctaggaataaacccaaacaaagaggttaaagccatctacaatgaaaa
cttttaaatctctgaagaaagagacactagaaagtagaaagttatcttca
gctgaaacatttttccattctaccaaaagccctgttctttcctctgagat
caaaatatcctatactacagggaagctccttaagcaggaaggtaaacaac
tcaaataaggaagttcctgatctgaccagattctctaagcctctcccacg
agtcttgtcactctcagagtaaagaagtcaagctgctaagagtcacatag
cagcagctgtaagagactttgagaccagccaactgtctgaaagcagattc
agcatgctgctgaagagtgaagaagactgagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_135245629_135246684
seq2: B6Ng01-064N16.g_68_1100 (reverse)

seq1  GACTCAGTCTCTCTTCAACCTCCTTCAGGCAGCATGGCTGGAATCTGCTT  50
      |||||||||| ||||||  || ||||| ||||||| ||| ||||||||||
seq2  GACTCAGTCT-TCTTCA--CT-CTTCA-GCAGCAT-GCT-GAATCTGCTT  43

seq1  TTTCCAGACAGTTTGCCTGGTCTCAGAGTCTTCTTTACAGCTTGGCTTGC  100
      |   ||||||| ||| ||||||||| |||||   ||||||||  || |||
seq2  T---CAGACAG-TTGGCTGGTCTCAAAGTCT--CTTACAGCT--GC-TGC  84

seq1  TAATTGTGACTCTTAGCAGCTTGACTTCTTTACTCTTGAGAGTGAACAAG  150
      ||  ||||||||||||||||||||||||||||||| |||||||| |||| 
seq2  TA--TGTGACTCTTAGCAGCTTGACTTCTTTACTC-TGAGAGTG-ACAA-  129

seq1  GACTCGTGGGAGAGGCTTAGAGAATCTGGTCAGATTCAGGAACTTCCTTA  200
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GACTCGTGGGAGAGGCTTAGAGAATCTGGTCAGA-TCAGGAACTTCCTTA  178

seq1  TTTTGAGTTGTTTACCTTCCTGCTTAAGGAGCTTCCCTGTAGTATAGGAT  250
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTTGAGTTGTTTACCTTCCTGCTTAAGGAGCTTCCCTGTAGTATAGGAT  227

seq1  ATTTTGATCTCAGAGGAAAGAACAGGGCTTTTGGTAGAATGGAAAAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGATCTCAGAGGAAAGAACAGGGCTTTTGGTAGAATGGAAAAATGT  277

seq1  TTCAGCTGAAGATAACTTTCTACTTTCTAGTGTCTCTTTCTTCAGAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTGAAGATAACTTTCTACTTTCTAGTGTCTCTTTCTTCAGAGATT  327

seq1  TAAAAGTTTTCATTGTAGATGGCTTTAACCTCTTTGTTTGGGTTTATTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTTTTCATTGTAGATGGCTTTAACCTCTTTGTTTGGGTTTATTCC  377

seq1  TAGATACTTTATTTACTTTTACCTTACTGTGAATAAAGTGCATCCGTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATACTTTATTTACTTTTACCTTACTGTGAATAAAGTGCATCCGTGAT  427

seq1  CACTTTCTCTGTGTTGTTGATTTATAGAGAAACAATTGATTTCTACAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCTCTGTGTTGTTGATTTATAGAGAAACAATTGATTTCTACAAGT  477

seq1  TGCTTCTATATCCTGCCACATTCCTGAAATTGCTCATTGTTTCTAGGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTATATCCTGCCACATTCCTGAAATTGCTCATTGTTTCTAGGAGC  527

seq1  TTTCAGTAGATATTTTGGGGTCTGTTATGAATGATAGCATATCATTTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTAGATATTTTGGGGTCTGTTATGAATGATAGCATATCATTTGAA  577

seq1  AATAGGTATAGTTTGACTTCTTTTTCTGTTTGTATCCCTTTCATTTCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGTATAGTTTGACTTCTTTTTCTGTTTGTATCCCTTTCATTTCCTG  627

seq1  GTTCTCACTGTGGCATTGCTTGAGAGAAGAAAGCTCCAGGTGAGTTGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCACTGTGGCATTGCTTGAGAGAAGAAAGCTCCAGGTGAGTTGAAA  677

seq1  CAGTAAAAAGCCAAAATAAGTGATCTCCTAGACTCAAACATCAGGTCAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAAAGCCAAAATAAGTGATCTCCTAGACTCAAACATCAGGTCAAG  727

seq1  TGTTGAATCTGCCGATAGACGTTTAGAGTGACTCACATATTCTACAGTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAATCTGCCGATAGACGTTTAGAGTGACTCACATATTCTACAGTGG  777

seq1  GTAATCGCTCCAAAGAGAAACATAAATTCAGTGTATCAGAATCTCTCCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCGCTCCAAAGAGAAACATAAATTCAGTGTATCAGAATCTCTCCCA  827

seq1  ACATTTGTTAATCTGAATTTCCAGGTGCTTTAGGAGTGCTTTACTTAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGTTAATCTGAATTTCCAGGTGCTTTAGGAGTGCTTTACTTAAAT  877

seq1  TCTCTGAAAATCCTTAGGTTGTCCAAAGACAGGTAGGTTAAGCATGTATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAAAATCCTTAGGTTGTCCAAAGACAGGTAGGTTAAGCATGTATT  927

seq1  AGCAGAGATAATAGGCAGCCTTAACAGGCTCTTGGAGTTGAACACATTTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGATAATAGGCAGCCTTAACAGGCTCTTGGAGTTGAACACATTTC  977

seq1  AGAATAGGAACAACTTGACATAAGAAAAAAAAAAAAACAGAGACGAAGTG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGGAACAACTTGACATAAGAAAAAAAAAAAAACAGAGACGAAGTG  1027

seq1  GAATTC  1056
      ||||||
seq2  GAATTC  1033


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