BAC Information

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BAC

Clone NameB6Ng01-065D13
ChromosomeX (Build37)
Map Location 135,901,322 - 136,071,602
singlet/doubletdoublet
Overlap geneD330045A20Rik
Upstream geneIl1rapl2, Nrk, Serpina7, 4930513O06Rik, 4933428M09Rik, Mum1l1, LOC675062, Trap1a, C330013F16Rik, EG666359
Downstream geneRnf128, LOC622432, Tbc1d8b, Ripply1, Cldn2, Morc4, Rbm41, Gm719, E230019M04Rik, LOC622213, LOC100041446, EG245643, LOC666424, Prps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065D13.bB6Ng01-065D13.g
ACCDH884761DH884762
length1,059752
definitionDH884761|Mus musculus domesticus DNA, BAC clone: B6Ng01-065D13, 5' end.DH884762|Mus musculus domesticus DNA, BAC clone: B6Ng01-065D13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(136,070,527 - 136,071,602)(135,901,322 - 135,902,072)
sequence
gaattcaaatcacacatacatcatcttaggtaattgggagcaggctccct
ctgagtggcaaattcagaaaagacctgagaccttcaactttcacttcagg
ctgctccaaaggctctggggaggtccaggtaagcactgaaggatgggcac
agcacagagccaatcagccatggttgggagaagtggtatttcattgtaat
ttctgtagttcggggaaatgtctgtcaggacaatagagggacacaattaa
ggaacggagaattgtgtagctacatacaatgagtttctcccaaaaatttg
aggaagttactaggtagaaaaaagggacatttatagtttagggggaaaaa
ggagcaagccctttgaggaagaaaaagctgatttctatagtcactgaatc
ataatattctaaatgttcagttttctattaataagaagctaaaactttac
aagggagaaagtggatttatttgtttttatattttgctgtttgaataatt
ttcactttttccatgttttcatgacccacagtatttaatagcaccatatt
tcatattgttactgttttcagaagcagcgagatataaaaataatagcaat
ataggaaaacatcaaaattaaaccagagaaacagtacttgaaccaaagtc
aaaatatcaaagaggaagaactacaataataaaaatcaaacaaatgaacc
cgcaggggcgggagggggcggcaattgcagaaaaagagacttcagttgag
agctttaatggtatttttgcgaaagtagcaagagagtcagcaaaatggga
ggtccattaaaggagcacaaagggaactgagctaagaaaacctgggccta
gggaacaggtgcgtccacactaggctgaccagagttgatgttatcattat
aaaggaagggaagcaagggtgcttggggaaagaatggccctacgtttcac
atgagaccattagacaaatgggtgaaagcatgacaaacgaagaactcaaa
gcagcagacagcttgacagccaaatgtgcttacgcagattttcttaaata
aaaacaaaa
gaattctccatctggacagtactcccaagagtactttgacatttttcata
gtgctttttcgccccaagtgtacacccccaagacaaagcttggagaactg
tagagtaacttcagtgattatggtcaccccaagatgaaaccttatctttt
atccaggaagtgcaaaattgaagtgaaagttctttactaacactgtagag
ggggtgggaggaaggcaaaggtcaacagataggttcttcaagaaagtacc
tagcaaaccagggcattccaatggcctgctgttctagctccatcatgtgg
aaaggcctggcatttttatctgtcactgtaaaaaacatgctggaaaaaaa
aaagcccaacactttattatgaaccaacacaaaagaccatatgctctagg
aacacaaactcacattaagtacatgagctctagataaacatggtttcctc
tataaatggattacgcaagtcttttatagtctcaagaaggaaggagatga
agtcatcagggagataaactacaaaaccatgaggccatccttctcaaggt
tcaggtagcctctcctccccagttgttgggagaggaaggtcattctttat
gtaggatgtggctattggtaagtttcctgtactccagtggatggccccac
acccatgcacacatgggcagcgctacctatactgtatttattagaaaaaa
tgaaagcactcttgttgggggtatatagaagtagttgagggggcattggg
at
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_136070527_136071602
seq2: B6Ng01-065D13.b_49_1107 (reverse)

seq1  TTTTTTTTTTA---AAGAAAATTCTGCTGTAAAGCACATTTTTGTGCTGG  47
      |||| ||||||   ||||||| ||||| || ||||||||||    ||| |
seq2  TTTTGTTTTTATTTAAGAAAA-TCTGC-GT-AAGCACATTT---GGCT-G  43

seq1  TCAAGCTGGTTCTTGCTTGCTTTTGTGTTTCTTTCTTTTGTCATGCCTTT  97
      ||||||||  || ||| ||| |||| |||   ||| ||||||||| ||||
seq2  TCAAGCTG--TC-TGC-TGC-TTTGAGTT--CTTCGTTTGTCATG-CTTT  85

seq1  CACCCATTTTGTTCTAATGGGTCTCATTGTGAAACCTAGGGCCATTCTTT  147
      |||||||||   |||||| ||||||| |||||||| ||||||||||||||
seq2  CACCCATTT--GTCTAAT-GGTCTCA-TGTGAAACGTAGGGCCATTCTTT  131

seq1  CCCCAAGCACCCTTGCCTTCCCTTCCTTTATAACTGATAACATCAACTCT  197
      ||||||||||||||| ||||||||||||||||| ||||||||||||||||
seq2  CCCCAAGCACCCTTG-CTTCCCTTCCTTTATAA-TGATAACATCAACTCT  179

seq1  GGTCAGCCTAGTGTGGACGCACCTGTTCCCTAGGCCCAGGTTTTCTTAGC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGCCTAGTGTGGACGCACCTGTTCCCTAGGCCCAGGTTTTCTTAGC  229

seq1  TCAGTTCCCTTTGTGCTCC-TTAATGGACCTCCCATTTTGCTGACTCTCT  296
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCAGTTCCCTTTGTGCTCCTTTAATGGACCTCCCATTTTGCTGACTCTCT  279

seq1  TGCTACCTTCGCAAAAATACCATTAAAGCTCTCAACTGAAGTCTCTTTTT  346
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACTTTCGCAAAAATACCATTAAAGCTCTCAACTGAAGTCTCTTTTT  329

seq1  CTGCAATTGCCGCCCCCTCCCGCCCCTGCGGGTTCATTTGTTTGATTTTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAATTGCCGCCCCCTCCCGCCCCTGCGGGTTCATTTGTTTGATTTTT  379

seq1  ATTATTGTAGTTCTTCCTCTTTGATATTTTGACTTTGGTTCAAGTACTGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGTAGTTCTTCCTCTTTGATATTTTGACTTTGGTTCAAGTACTGT  429

seq1  TTCTCTGGTTTAATTTTGATGTTTTCCTATATTGCTATTATTTTTATATC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGGTTTAATTTTGATGTTTTCCTATATTGCTATTATTTTTATATC  479

seq1  TCGCTGCTTCTGAAAACAGTAACAATATGAAATATGGTGCTATTAAATAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTGCTTCTGAAAACAGTAACAATATGAAATATGGTGCTATTAAATAC  529

seq1  TGTGGGTCATGAAAACATGGAAAAAGTGAAAATTATTCAAACAGCAAAAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTCATGAAAACATGGAAAAAGTGAAAATTATTCAAACAGCAAAAT  579

seq1  ATAAAAACAAATAAATCCACTTTCTCCCTTGTAAAGTTTTAGCTTCTTAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAACAAATAAATCCACTTTCTCCCTTGTAAAGTTTTAGCTTCTTAT  629

seq1  TAATAGAAAACTGAACATTTAGAATATTATGATTCAGTGACTATAGAAAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGAAAACTGAACATTTAGAATATTATGATTCAGTGACTATAGAAAT  679

seq1  CAGCTTTTTCTTCCTCAAAGGGCTTGCTCCTTTTTCCCCCTAAACTATAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTTTCTTCCTCAAAGGGCTTGCTCCTTTTTCCCCCTAAACTATAA  729

seq1  ATGTCCCTTTTTTCTACCTAGTAACTTCCTCAAATTTTTGGGAGAAACTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCCTTTTTTCTACCTAGTAACTTCCTCAAATTTTTGGGAGAAACTC  779

seq1  ATTGTATGTAGCTACACAATTCTCCGTTCCTTAATTGTGTCCCTCTATTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATGTAGCTACACAATTCTCCGTTCCTTAATTGTGTCCCTCTATTG  829

seq1  TCCTGACAGACATTTCCCCGAACTACAGAAATTACAATGAAATACCACTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGACAGACATTTCCCCGAACTACAGAAATTACAATGAAATACCACTT  879

seq1  CTCCCAACCATGGCTGATTGGCTCTGTGCTGTGCCCATCCTTCAGTGCTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAACCATGGCTGATTGGCTCTGTGCTGTGCCCATCCTTCAGTGCTT  929

seq1  ACCTGGACCTCCCCAGAGCCTTTGGAGCAGCCTGAAGTGAAAGTTGAAGG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGACCTCCCCAGAGCCTTTGGAGCAGCCTGAAGTGAAAGTTGAAGG  979

seq1  TCTCAGGTCTTTTCTGAATTTGCCACTCAGAGGGAGCCTGCTCCCAATTA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGTCTTTTCTGAATTTGCCACTCAGAGGGAGCCTGCTCCCAATTA  1029

seq1  CCTAAGATGATGTATGTGTGATTTGAATTC  1076
      ||||||||||||||||||||||||||||||
seq2  CCTAAGATGATGTATGTGTGATTTGAATTC  1059

seq1: chrX_135901322_135902072
seq2: B6Ng01-065D13.g_68_819

seq1  GAATTCTCCATCTGGACAGTACTCCCAAGAGTACTTTGACATTTTTCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATCTGGACAGTACTCCCAAGAGTACTTTGACATTTTTCATA  50

seq1  GTGCTTTTTCGCCCCAAGTGTACACCCCCAAGACAAAGCTTGGAGAACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTTTTCGCCCCAAGTGTACACCCCCAAGACAAAGCTTGGAGAACTG  100

seq1  TAGAGTAACTTCAGTGATTATGGTCACCCCAAGATGAAACCTTATCTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTAACTTCAGTGATTATGGTCACCCCAAGATGAAACCTTATCTTTT  150

seq1  ATCCAGGAAGTGCAAAATTGAAGTGAAAGTTCTTTACTAACACTGTAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGGAAGTGCAAAATTGAAGTGAAAGTTCTTTACTAACACTGTAGAG  200

seq1  GGGGTGGGAGGAAGGCAAAGGTCAACAGATAGGTTCTTCAAGAAAGTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGGAGGAAGGCAAAGGTCAACAGATAGGTTCTTCAAGAAAGTACC  250

seq1  TAGCAAACCAGGGCATTCCAATGGCCTGCTGTTCTAGCTCCATCATGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAACCAGGGCATTCCAATGGCCTGCTGTTCTAGCTCCATCATGTGG  300

seq1  AAAGGCCTGGCATTTTTATCTGTCACTGTAAAAAACATGCTGGAAAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCCTGGCATTTTTATCTGTCACTGTAAAAAACATGCTGGAAAAAAA  350

seq1  AAAGCCCAACACTTTATTATGAACCAACACAAAAGACCATATGCTCTAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCAACACTTTATTATGAACCAACACAAAAGACCATATGCTCTAGG  400

seq1  AACACAAACTCACATTAAGTACATGAGCTCTAGATAAACATGGTTTCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAACTCACATTAAGTACATGAGCTCTAGATAAACATGGTTTCCTC  450

seq1  TATAAATGGATTACGCAAGTCTTTTATAGTCTCAAGAAGGAAGGAGATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATGGATTACGCAAGTCTTTTATAGTCTCAAGAAGGAAGGAGATGA  500

seq1  AGTCATCAGGGAGATAAACTACAAAACCATGAGGCCATCCTTCTCAAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATCAGGGAGATAAACTACAAAACCATGAGGCCATCCTTCTCAAGGT  550

seq1  TCAGGTAGCCTCTCCTCCCCAGTTGTTGGGAGAGGAAGGTCATTCTTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTAGCCTCTCCTCCCCAGTTGTTGGGAGAGGAAGGTCATTCTTTAT  600

seq1  GTAGGATGTGGCTATTGGTAAGTTTCCTGTACTCCAGTGGATGGCCCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGATGTGGCTATTGGTAAGTTTCCTGTACTCCAGTGGATGGCCCCAC  650

seq1  ACCCATGCACACATGGGCAGCGCTACCTATACTGTA-TTATTAGAAAAAA  699
      |||||||||||||||||||||||||||||||||||| ||||||| |||||
seq2  ACCCATGCACACATGGGCAGCGCTACCTATACTGTATTTATTAG-AAAAA  699

seq1  ATGAAAGCACTCTTGTTGGGGGTATATAGAAGTAGTTGAGGGGGCA-TGG  748
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATGAAAGCACTCTTGTTGGGGGTATATAGAAGTAGTTGAGGGGGCATTGG  749

seq1  GAT  751
      |||
seq2  GAT  752