BAC Information

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BAC

Clone NameB6Ng01-068D14
ChromosomeX (Build37)
Map Location 52,084,430 - 52,085,418
singlet/doubletsinglet
Overlap genenone
Upstream geneXlr, LOC100040719, LOC100040730, LOC100040260, LOC100040271, LOC100040765, LOC194788, LOC100040789, LOC666072, LOC100040317, LOC625476, LOC625508, LOC666096, LOC100040867, LOC100040894, LOC666122
Downstream geneLOC666135, LOC100038960, EG666151, EG666161, EG666199, 4930527E24Rik, LOC626274, LOC625210, LOC100039055, LOC100039066, LOC676623, EG626315
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068D14.bB6Ng01-068D14.g
ACCDH886876DH886877
length1,262989
definitionDH886876|Mus musculus domesticus DNA, BAC clone: B6Ng01-068D14, 5' end.DH886877|Mus musculus domesticus DNA, BAC clone: B6Ng01-068D14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagactctttgtgcagacaactgaattaatggctagtgctttat
tgttttatggaagtgcttaattagttacttaataggttaaactccttgct
gctatctggaatctaagaacactggaaaaggctttagctatgttagaata
caatcttaaaaggcatttactataaggtaatatttaatagagtacacgtg
aatctatacattagactaacttggtggaaatttgattattatgggttagg
ggaaaacgctaatactccgggaggggaatttccatggaactcttatcctc
gtgtacagcttccaggctcttcacctgtcaaactcacccaaactggagag
ctgactttcgtcagacttccaggaggagagtcctagaaattcatttctca
tgagcagctttttggcatttctgcctcagaagctgactccaccagagtgc
cctggcatctcaccctttttaatttttaatattttatctttatttctcag
ccaatgttccaggatgtaccactttgtcatagctacatatctcaggagca
ctctaaagatgtgaggaaacacaatgattactaataaagtaatgccaaaa
ataataacatgtaggattatatattgaacccaatcaagggggttcagtgc
acttaagttgtttttcaagtctctggccaattcatcaatgttccaaggtt
ccaaatggcttttactaatatctgaaatttttatttttaacacttctaag
tcataagaaatatcagtatctttccaaatcccctgtaaatgtgtttttgt
cttaagccactcagtagttgtactataaagtaagggagtgacacaaatgt
actgggaaaaagcatgacatttagtagctaacctggtcttgatattagca
atatcttgccttattgccagtactacttcttccagggcgttaacctttgc
ttccaatttttatctatgagattcaactctgacaggctacagagatattc
ttatgcatgccattagaaatgagtggtatgctgttgctgtctaaggctgg
ggtgatattgtaaggatttagactgtataggtgtattcttagatcagtgc
tactacatcctcttagtccataggtcattagtctttaaggttgaattaga
ttttaaccaaggatctttatctcacgcgacaagacatagcgacttacatc
tacggtgaatccttttaatgacctacaattgtgtatgtcagattactctg
agtatgtaggga
gaattcccactctgaaactatatgtctatggttgcacagacatttaaaaa
tatttacactggttgtcctaggttagagatagtatctttttgattatttg
tccttgatttaggggatggctctggtcttcttgtcattccactattggag
agcaatgtgtatcaaaacatagtgtctcccatgttggtagatgtagtagg
tgattttgttacacttgaaaagtggatgtggtaaataaagcagggtccac
gtaactccttggcccaactgagtcatacaaatacagtagataacagaata
atcaggctgggcccacaaagcagggccaggtcacacctagcaagtagtgg
ctatgtatcctatccatagaaggtaaagaaatgctgatagatactttcag
aacaggtccagttagctgcctatttactcctgatagggcaacagtgacag
agattgttctacctaagtaaattactttgtgaaacagtgagttggttttt
tgtttgtttttttttttgtgggaggggtcatttctttacaggaacaaggc
tgactataaatgcagctatatcacagagaaggaaccacatcatgagtgct
aactcatgtgaccttgggccccaggagctctcttctcaaccagcaggtag
atatatcaaagagataatctattcatcacagcaattgttttaatctttcc
cagccttttgtagggcccagcaaaccttatagctttctgagcttcctaaa
acttgcaagttttatttagttctgagttgtaggatcctccatcctcctta
ttggtaggaatgtgtgattaatttactaaaaaaaaaacacattaatatta
tatgagtaatatgagtacgttttttgttttgttttgttttgttttgtttt
aatctcatgtgtgggataagaggctgcttcatattttccccagatgcaga
ttctttatgtttaaaattctagggacttcttgagaggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_52084430_52085418
seq2: B6Ng01-068D14.g_69_1057 (reverse)

seq1  ATCCTCTCAAG-AGTCCCTAGAATTTTAAACATAAAGTATCTGCATCTGG  49
      ||||||||||| ||||||||||||||||||||||||| ||||||||||||
seq2  ATCCTCTCAAGAAGTCCCTAGAATTTTAAACATAAAGAATCTGCATCTGG  50

seq1  GGAAAATATGAAGCAGCCTCTTATCCCACACATGAGATTAAAACAAAACA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATATGAAGCAGCCTCTTATCCCACACATGAGATTAAAACAAAACA  100

seq1  AAACAAAACAAAACAAAAAACGTACTCATATTACTCATATAATATTAATG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACAAAACAAAAAACGTACTCATATTACTCATATAATATTAATG  150

seq1  TGTTTTTTTTTTTAGTAAATTAATCACACATTCCTACCAATAAGGAGGAT  199
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TG-TTTTTTTTTTAGTAAATTAATCACACATTCCTACCAATAAGGAGGAT  199

seq1  GGAGGATCCTACAACTCAGAACTAAATAAAACTTGCAAGTTTTAGGAAGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGATCCTACAACTCAGAACTAAATAAAACTTGCAAGTTTTAGGAAGC  249

seq1  TCAGAAAGCTATAAGGTTTGCTGGGCCCTACAAAAGGCTGGGAAAGATTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAGCTATAAGGTTTGCTGGGCCCTACAAAAGGCTGGGAAAGATTA  299

seq1  AAACAATTGCTGTGATGAATAGATTATCTCTTTGATATATCTACCTGCTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATTGCTGTGATGAATAGATTATCTCTTTGATATATCTACCTGCTG  349

seq1  GTTGAGAAGAGAGCTCCTGGGGCCCAAGGTCACATGAGTTAGCACTCATG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGAAGAGAGCTCCTGGGGCCCAAGGTCACATGAGTTAGCACTCATG  399

seq1  ATGTGGTTCCTTCTCTGTGATATAGCTGCATTTATAGTCAGCCTTGTTCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTTCCTTCTCTGTGATATAGCTGCATTTATAGTCAGCCTTGTTCC  449

seq1  TGTAAAGAAATGACCCCTCCCACAAAAAAAAAAACAAACAAAAAACCAAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGAAATGACCCCTCCCACAAAAAAAAAAACAAACAAAAAACCAAC  499

seq1  TCACTGTTTCACAAAGTAATTTACTTAGGTAGAACAATCTCTGTCACTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTTTCACAAAGTAATTTACTTAGGTAGAACAATCTCTGTCACTGT  549

seq1  TGCCCTATCAGGAGTAAATAGGCAGCTAACTGGACCTGTTCTGAAAGTAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTATCAGGAGTAAATAGGCAGCTAACTGGACCTGTTCTGAAAGTAT  599

seq1  CTATCAGCATTTCTTTACCTTCTATGGATAGGATACATAGCCACTACTTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAGCATTTCTTTACCTTCTATGGATAGGATACATAGCCACTACTTG  649

seq1  CTAGGTGTGACCTGGCCCTGCTTTGTGGGCCCAGCCTGATTATTCTGTTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTGTGACCTGGCCCTGCTTTGTGGGCCCAGCCTGATTATTCTGTTA  699

seq1  TCTACTGTATTTGTATGACTCAGTTGGGCCAAGGAGTTACGTGGACCCTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTGTATTTGTATGACTCAGTTGGGCCAAGGAGTTACGTGGACCCTG  749

seq1  CTTTATTTACCACATCCACTTTTCAAGTGTAACAAAATCACCTACTACAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTTACCACATCCACTTTTCAAGTGTAACAAAATCACCTACTACAT  799

seq1  CTACCAACATGGGAGACACTATGTTTTGATACACATTGCTCTCCAATAGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAACATGGGAGACACTATGTTTTGATACACATTGCTCTCCAATAGT  849

seq1  GGAATGACAAGAAGACCAGAGCCATCCCCTAAATCAAGGACAAATAATCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGACAAGAAGACCAGAGCCATCCCCTAAATCAAGGACAAATAATCA  899

seq1  AAAAGATACTATCTCTAACCTAGGACAACCAGTGTAAATATTTTTAAATG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATACTATCTCTAACCTAGGACAACCAGTGTAAATATTTTTAAATG  949

seq1  TCTGTGCAACCATAGACATATAGTTTCAGAGTGGGAATTC  989
      ||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCAACCATAGACATATAGTTTCAGAGTGGGAATTC  989