BAC Information

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BAC

Clone NameB6Ng01-069B08
Chromosome7 (Build37)X (Build37)
Map Location 94,594,580 - 94,595,505116,776,164 - 116,776,199
singlet/doubletsingletsinglet
Overlap geneTyr
Upstream geneOlfr299, Olfr298, Olfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477, Nox4
Downstream geneGrm5, Ctsc, LOC100039756, Rab38
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069B08.bB6Ng01-069B08.g
ACCDH887492DH887493
length933571
definitionDH887492|Mus musculus domesticus DNA, BAC clone: B6Ng01-069B08, 5' end.DH887493|Mus musculus domesticus DNA, BAC clone: B6Ng01-069B08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(94,594,580 - 94,595,505)(116,776,164 - 116,776,199)
sequence
gaattctcggtactgaattctgggtccctgtagtacaagaaggaaaactg
agtttcaattataaacacacacacacacacacacacacacacacacacac
acacacacacacatctttagccttgtattttacaattacgaattcatctc
ttttctgccatctgaaggttattttatgataaaaaatccatttctcgtgt
aagaattactgactgaagatgtctactttagacttttaacaccctacaca
tgcacaaataaaaaggttttctaccttttgacacaaaacattaaagtttt
gtttaactatctactttactttctaattgctaaggaatttcttgcatatt
accagaaaagtattaaacttaggtatagctgtacatcacagaatatgata
tgaaatcccagataattttagcacattctagttgagtgtacaatagtcag
tcttacacattacttcaatattttatctcaaaattccagagagattcctt
tacatttaatggagaattcatactatgatattaaatcttgtaatacattc
accacttttctagagttctatttgtttgagagtgaaaatcttttgcccag
aagcatgagacataatatgtaaagtcctatgtagcatctcaccattcagt
agttcttgtttctacacctcttcttttattttgttttttgtttttttttt
ggttttttgtttgtttgtttttgttttgttgttgttgtttgttgtttgta
tgtgtgtgttttctatatagggtttctcttgtataacccttggttgtcct
ggagcttactttttagaccaaggtggggctctaactcataaatctgcctc
ccaagtggtggggattaaagggtgtggcacaacatgcccagctctttctt
ctaatacatagatttccttcctgagaaatttaa
ctgatctgtattgtattttgtcaaatgctttttagcatctcatgagatga
tcatgtttttttttttctttttagtttattttatagtgtattatgttaag
ggaatttcatgtattgaactaaccttatattcctgggatgaagcctactt
gatcgtggtgaatgatggcttcaatgtgttcctggatttggtttactaga
atttttgagtatttttatatggatattcataagcgaaattggtctgaagt
tctttccttgttgagtctttgtgtgatttaggtacaagagtaattgtgcc
ctcataaaatgaattaggtagagttccttctgtttctatattatagaata
atttgaagagtgttggtgttagctctttttaaaggtctggtagaagtttt
cactaaagccatctgggcctgggttgttttgttttgttttgttttgtttt
gttttgttttgttttgtttttgaaggttttaattgatttctattttctta
ggggataggggctgcttagatagtatacttgctctttgatttaactttga
tatgtggtatctgtctagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_94594580_94595505
seq2: B6Ng01-069B08.b_46_978 (reverse)

seq1  TTAAATTTCTCAGAGAGGAAATCTATGTATAAGAAGAAAGAGCTGGGCAT  50
      |||||||||||||  ||||||||||||||| |||||||||||||||||||
seq2  TTAAATTTCTCAGGAAGGAAATCTATGTATTAGAAGAAAGAGCTGGGCAT  50

seq1  GTTAGTG-CACA-CCTTTAAT-CCCAGCACTTGGGAGGCAGATTTCTGAG  97
      ||| ||| |||| |||||||| |||| |||||||||||||||||| ||||
seq2  GTT-GTGCCACACCCTTTAATCCCCACCACTTGGGAGGCAGATTTATGAG  99

seq1  TTAGAG-GCCAGCCTGGTCTAAAAAGTGAGCTCCAGGACAACC-AGGGCT  145
      ||||||  ||| | ||||||||||||| ||||||||||||||| |||| |
seq2  TTAGAGCCCCACCTTGGTCTAAAAAGTAAGCTCCAGGACAACCAAGGGTT  149

seq1  ATAC-AGAGAAACCCTATCTCGAAAACACACACATACAAACAAC-AACAA  193
      |||| ||||||||||||| | ||||||||||||||||||||||| |||||
seq2  ATACAAGAGAAACCCTATATAGAAAACACACACATACAAACAACAAACAA  199

seq1  CAACAACAAAACAAAAACAAACAAACAAAAAACC-AAAAAAAAACAAAAA  242
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CAACAACAAAACAAAAACAAACAAACAAAAAACCAAAAAAAAAACAAAAA  249

seq1  ACAAAATAAAAGAAGAGGTGTAGAAACAAGAACTACTGAATGGTGAGATG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATAAAAGAAGAGGTGTAGAAACAAGAACTACTGAATGGTGAGATG  299

seq1  CTACATAGGACTTTACATATTATGTCTCATGCTTCTGGGCAAAAGATTTT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATAGGACTTTACATATTATGTCTCATGCTTCTGGGCAAAAGATTTT  349

seq1  CACTCTCAAACAAATAGAACTCTAGAAAAGTGGTGAATGTATTACAAGAT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTCAAACAAATAGAACTCTAGAAAAGTGGTGAATGTATTACAAGAT  399

seq1  TTAATATCATAGTATGAATTCTCCATTAAATGTAAAGGAATCTCTCTGGA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATCATAGTATGAATTCTCCATTAAATGTAAAGGAATCTCTCTGGA  449

seq1  ATTTTGAGATAAAATATTGAAGTAATGTGTAAGACTGACTATTGTACACT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAGATAAAATATTGAAGTAATGTGTAAGACTGACTATTGTACACT  499

seq1  CAACTAGAATGTGCTAAAATTATCTGGGATTTCATATCATATTCTGTGAT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAGAATGTGCTAAAATTATCTGGGATTTCATATCATATTCTGTGAT  549

seq1  GTACAGCTATACCTAAGTTTAATACTTTTCTGGTAATATGCAAGAAATTC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGCTATACCTAAGTTTAATACTTTTCTGGTAATATGCAAGAAATTC  599

seq1  CTTAGCAATTAGAAAGTAAAGTAGATAGTTAAACAAAACTTTAATGTTTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCAATTAGAAAGTAAAGTAGATAGTTAAACAAAACTTTAATGTTTT  649

seq1  GTGTCAAAAGGTAGAAAACCTTTTTATTTGTGCATGTGTAGGGTGTTAAA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAAAAGGTAGAAAACCTTTTTATTTGTGCATGTGTAGGGTGTTAAA  699

seq1  AGTCTAAAGTAGACATCTTCAGTCAGTAATTCTTACACGAGAAATGGATT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAAAGTAGACATCTTCAGTCAGTAATTCTTACACGAGAAATGGATT  749

seq1  TTTTATCATAAAATAACCTTCAGATGGCAGAAAAGAGATGAATTCGTAAT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCATAAAATAACCTTCAGATGGCAGAAAAGAGATGAATTCGTAAT  799

seq1  TGTAAAATACAAGGCTAAAGATGTGTGTGTGTGTGTGTGTGTGTGTGTGT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAATACAAGGCTAAAGATGTGTGTGTGTGTGTGTGTGTGTGTGTGT  849

seq1  GTGTGTGTGTGTGTGTGTGTTTATAATTGAAACTCAGTTTTCCTTCTTGT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTTTATAATTGAAACTCAGTTTTCCTTCTTGT  899

seq1  ACTACAGGGACCCAGAATTCAGTACCGAGAATTC  926
      ||||||||||||||||||||||||||||||||||
seq2  ACTACAGGGACCCAGAATTCAGTACCGAGAATTC  933

seq1: chrX_116776164_116776199
seq2: B6Ng01-069B08.g_610_645 (reverse)

seq1  TTTCTAGACAGATACCAGGTACCAAAGTTAAATCAA  36
      |||||||||||||||||  || ||||||||||||||
seq2  TTTCTAGACAGATACCACATATCAAAGTTAAATCAA  36