BAC Information

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BAC

Clone NameB6Ng01-069G02
ChromosomeX (Build37)
Map Location 3,194,733 - 3,195,505
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC385516, LOC434721, LOC668957
Downstream geneLOC100043932, OTTMUSG00000016406, LOC673743, OTTMUSG00000016405, OTTMUSG00000016411, LOC668961, LOC100042159, LOC100042168, LOC627187, LOC100042185, OTTMUSG00000016407, OTTMUSG00000016437, OTTMUSG00000016420, LOC547057, EG546327, EG668965
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069G02.bB6Ng01-069G02.g
ACCDH887707DH887708
length1,143996
definitionDH887707|Mus musculus domesticus DNA, BAC clone: B6Ng01-069G02, 5' end.DH887708|Mus musculus domesticus DNA, BAC clone: B6Ng01-069G02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaattagcaccacagcagccttataataggatgttaaaacatt
gaggtgaagaaggatgattttacattaatgtttatttttgccaaaaaaat
agctatagacacatttaataaaaataactaggatatataactaatatttg
attaccaccaattacaattgataccaatagattacagacgtttcttctac
tttctgttaaagccttttttcttcccaccagttaattggaatctcacttg
atagcacctaacaaaggcttaggttctcctgtggcaagtttaaggtgagg
tcttagccaattaacatatcctgtaagcttttggaaataaaattttgaag
taaatttgtaccaattttccagtatgattgaaaccctaattattaaaaaa
gatattgcctctgaaacttatgaagcaacaattattccccagaactttaa
acttccctttagagacattagctaataaaatacttttcacttaggaaaca
atatatactgaaagatttaaaccttttgctttttgtattgaagctgataa
taatttttttttacatattgttaagctatgttaaccatacccaggggcaa
aagcctttaatggtcaccagttcactagaagtaaactctttacaaattga
aataattaaacttttaaatctataacaattttatatgaagtaggcaagtt
attttgaaatgcctttataagttttatagcctaattgaacttttttaaac
ttttgaatttaaattttatttagaacaacatctggctaggtgtgtaataa
ggctctgagaagtgtcacacaagccgagctgaagctgctccccttttgag
ctctgcctcaacccaaatgcaaacttttttttcaatataaacactctgtc
agagtcttggctcaaagattatcccttatgttgaagtatccttaaaagac
ctgttttcttgtgttggtcatgttgtttggaaagactctaccttgagttc
caaattaagctaactttctgttacagcgaaagttgcctgcccctttagag
ccctttgtaatcgcctctcttgcaagctggtcagctgtactgtccagcac
aggtgcagcctactatcagcttgtacgtgtaataactgctttt
gaattctaactcttacatatttgtaattaagaaaaaatctggtaggtgga
gattgttgcagggtttgcaaaaggttaatgagactattgaacttgtagag
gcattaaaaactggcctgcctactccattatagaattattatggatttgt
aagatagttctttattcctttgcatcctgatgattgtaaaggttttgctt
ttagtgagcttgcttgtaattttagagaacccatgaagcgatatcattgg
aaagttttgcctcaaggaaaggctaatagccctacattatgtaaaaattt
tttgtcactgcttcaatacagtgtatattattgattatatgggtatttta
ttagctggttcctctgatggaattttactatgaggctttgcacttacaca
aagagctttaaaattttggagtagttgttgctccagaaaagattcaaagg
agaattcctttttcaatatttggaacataagttatatcctaaacaaattt
cagcacaaaaaaattcaagtacgaaaaaataatttacttactctaaatga
ttttcaatggttgttaggagatattaattgactaagacctcaccttaagc
ttactacaggagaacttaaacctctatttgatgccctcaaggggagtgca
aaatcctaattccccttgacaattaacagatgagggatgaatagcttttg
cagaaagtagaggaagctattagccaacaacagatacattatatagacta
tgatcagttgttggctgcttgcattattgctacaactcatgagtccacag
cagtcctttgggataagggaccgttaaatgtggattcatctttcttggtc
tccaaagaaagtttttattgctttcttatgaggcttgttgctgtgttaat
cagaattggaagaatagagtcacaaaaaattttggaaagacctgatgaaa
tatttctccctttattccatacagcaattaaatgggttattgccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_3194733_3195505
seq2: B6Ng01-069G02.b_430_1186

seq1  TAATTATTAAAAAAGATATTGCCTCTGAAACTTATGAAGCAACAATTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTAAAAAAGATATTGCCTCTGAAACTTATGAAGCAACAATTATT  50

seq1  CCCCAGAACTTTAAACTTCCCTTTAGAGACATTAGCTAATAAAATACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGAACTTTAAACTTCCCTTTAGAGACATTAGCTAATAAAATACTTT  100

seq1  TCACTTAGGAAACAATATATACTGAAAGATTTAAACCTTTTGCTTTTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTAGGAAACAATATATACTGAAAGATTTAAACCTTTTGCTTTTTGT  150

seq1  ATTGAAGCTGATAATAATTTTTTTTTACATATTGTTAAGCTATGTTAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGCTGATAATAATTTTTTTTTACATATTGTTAAGCTATGTTAACC  200

seq1  ATACCCAGGGGCAAAAGCCTTTAATGGTCACCAGTTCACTAGAAGTAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCAGGGGCAAAAGCCTTTAATGGTCACCAGTTCACTAGAAGTAAAC  250

seq1  TCTTTACAAATTGAAAAAATTAAACTTTTAAATCTATAACAATTTTATAT  300
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCTTTACAAATTGAAATAATTAAACTTTTAAATCTATAACAATTTTATAT  300

seq1  GAAGTAGGCAAGTTATTTTGAAATGCCTTTATAAGTTTTATAGCCTAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGGCAAGTTATTTTGAAATGCCTTTATAAGTTTTATAGCCTAATT  350

seq1  GAACTTTTTTAAACTTTTGAATTTAAATTTTATTTAGAACAACATCTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTTTTAAACTTTTGAATTTAAATTTTATTTAGAACAACATCTGGC  400

seq1  TAGGTGTGTAATAAGGCTCTGAGAAGTGTCACACAAGCCGAGCTGAAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGTGTAATAAGGCTCTGAGAAGTGTCACACAAGCCGAGCTGAAGCT  450

seq1  GCTCCCC-TTTGAGCTCTGCCTCAACCCAAATGCAAAC-TTTTTTTCAAT  498
      ||||||| |||||||||||||||||||||||||||||| |||||||||||
seq2  GCTCCCCTTTTGAGCTCTGCCTCAACCCAAATGCAAACTTTTTTTTCAAT  500

seq1  ATAAACACTCTGTCAGAGTCTTGGCTCAAAGATTATCCC-TATGTTGAAG  547
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATAAACACTCTGTCAGAGTCTTGGCTCAAAGATTATCCCTTATGTTGAAG  550

seq1  TATCCTT-AAAGACTTGTTTTCTTGTGTTTGTTCATGTTGTTTGGAAAGA  596
      ||||||| |||||| |||||||||||| ||| ||||||||||||||||||
seq2  TATCCTTAAAAGACCTGTTTTCTTGTG-TTGGTCATGTTGTTTGGAAAGA  599

seq1  CTCTAACCTTGAGTTCCCAATTTTAAGCTAACTTTCTGTTACAAGCGAAA  646
      |||| |||||||||||| ||  |||||||||||||||||||| |||||||
seq2  CTCT-ACCTTGAGTTCCAAA--TTAAGCTAACTTTCTGTTAC-AGCGAAA  645

seq1  GGTTGCCTGCTCCTTTAAGAGCTCCTTTTGTAATCGGCTCTC-TGCAAGG  695
       ||||||||| ||||| ||||  || |||||||||| ||||| |||||| 
seq2  -GTTGCCTGCCCCTTT-AGAG--CCCTTTGTAATCGCCTCTCTTGCAAG-  690

seq1  CTTGTTCAGCTGTACTTGGCTCCCAGCCACA-GTGCAGCTAACTTATCAG  744
        || |||||||||||      |||| |||| |||||||  || ||||||
seq2  -CTGGTCAGCTGTACT----GTCCAG-CACAGGTGCAGCCTAC-TATCAG  733

seq1  CTTGTACTGTGTAAATTAAAACTGCTTTT  773
      ||||||| |||||    | ||||||||||
seq2  CTTGTAC-GTGTA----ATAACTGCTTTT  757