BAC Information

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BAC

Clone NameB6Ng01-072A06
ChromosomeX (Build37)
Map Location 123,800,210 - 123,801,187
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039903, LOC665679, 4932411N23Rik, Gm381, LOC100040472, Gm382
Downstream gene4921511C20Rik, 4930412D23Rik, LOC385523, LOC100040516, Mdm4-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072A06.bB6Ng01-072A06.g
ACCDH889554DH889555
length9961,255
definitionDH889554|Mus musculus domesticus DNA, BAC clone: B6Ng01-072A06, 5' end.DH889555|Mus musculus domesticus DNA, BAC clone: B6Ng01-072A06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaaaatgttgagttgctctgctagcttgcagcctaaggcatga
tcagaacactgtgtttttagccaaactgcaatatccctgagtcatttcct
gtctaaggaaatagttggtaactatgttatgggacacgttattgcctctg
ccatgagaggaagccctagagattctacccgggaggcaacccgaccaaag
tcatgttttaaatgcagacaacttggacacttccattgtaattgtcctaa
gaagaagccacagtgtggagactgtactccagtattatgccttccttgct
attaaatgtcatcattagggaaatgagtgctgttcaagagctggtgttga
aggcaatcctctcccgcagtcaggaaacagggcacggggtccactctgga
cccttcaaaccagggtgtacaatgccatggatacccctgtgacttgctct
atccaatttgtcccacaaagaagtccttttatatccaagaccttgtccga
agtaccacaggaagcgcaggagtgaacctctgcatctcctcttgagcagt
gctgactccccaaatgggaccacaagccttagatatggatgtttatggaa
ccaaccgtccctaaaggaaatgttggcctcatattaagaaggagtagtgc
catgatgagggaaataagaattttacctggggtatagatgctgatttttc
tggagaacttaaaattatggttagtgcagaaagcagagttgttattattc
ctcaggggtatagaataccacaattgattttattacccatgtgtcttagt
cagggtttctattcctgcacaaacatcatgaccaagaagcaagttgggga
ggaaagggtttatttggcttatacttccatactgctgttcatcaccaaag
gatgtcagactggaactcaagcaggtcagaatcagagctgttgcagaggc
cataaagggatgttctttactggctgctcactggcttgctcagctg
gaattccaagcccaaggtcttgctaaggacgaactaggactgttggaaca
ctggcggacggctttagctatgtcagaattcaatcttaaaaggcacttat
gataggaaaatattgaaatagagcacgtggatccatgcactagactaacg
cgggaatggaacgcgggaatgaaaaattactgtatgggtacggaacgcta
cactccaggaggagagcttccttgaaactcttttgcctcatgagtttcat
taggtcccatttgtcaattctcgatcttacagcacaagccattgatgttc
tgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaaggagataagtatggatcgattcgca
ttcttctacatgattaccaccagttgtgccagcaccaattgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcgaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctactggtctgtctctataccagtaccatgcagtttttatcacaattgct
ctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctttt
atccttgagaagactttttgctatcctaggttttttgttattccagatga
atttgcaaattgctccttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccatccatgagcatgggagattttccatcttctg
agatcttctttaatttctttctcagagatttgaagtttttatcatataga
tctttcacttccttagttagagtcacgccaagatattttatattatttgt
gactattgagaggtgttgtttccctaatttctttctcagcctgtttattc
ttgtatgagaaaggccatttgacttgtttgagttatttattatccgccta
ccttccatccaacctgtttaccaggtttaggatttcctggtgaactaggt
acttaatacctagagatatatctgcgcattgtaattggcattcccttccc
attgatcccttggatccttccggtatgtgccatcgctcgcccctcgcgcc
caact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_123800210_123801187
seq2: B6Ng01-072A06.b_46_1020

seq1  GAATTCAAAAAATGTTGAGTTGCTCTGCTAGCTTGCAGCCTAAGGCATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAAATGTTGAGTTGCTCTGCTAGCTTGCAGCCTAAGGCATGA  50

seq1  TCAGAACACTGTGTTTTTAGCCAAACTGCAATATCCCTGAGTCATTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACACTGTGTTTTTAGCCAAACTGCAATATCCCTGAGTCATTTCCT  100

seq1  GTCTAAGGAAATAGTTGGTAACTATGTTATGGGACACGTTATTGCCTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAGGAAATAGTTGGTAACTATGTTATGGGACACGTTATTGCCTCTG  150

seq1  CCATGAGAGGAAGCCCTAGAGATTCTACCCGGGAGGCAACCCGACCAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAGAGGAAGCCCTAGAGATTCTACCCGGGAGGCAACCCGACCAAAG  200

seq1  TCATGTTTTAAATGCAGACAACTTGGACACTTCCATTGTAATTGTCCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTTTAAATGCAGACAACTTGGACACTTCCATTGTAATTGTCCTAA  250

seq1  GAAGAAGCCACAGTGTGGAGACTGTACTCCAGTATTATGCCTTCCTTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGCCACAGTGTGGAGACTGTACTCCAGTATTATGCCTTCCTTGCT  300

seq1  ATTAAATGTCATCATTAGGGAAATGAGTGCTGTTCAAGAGCTGGTGTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATGTCATCATTAGGGAAATGAGTGCTGTTCAAGAGCTGGTGTTGA  350

seq1  AGGCAATCCTCTCCCGCAGTCAGGAAACAGGGCACGGGGTCCACTCTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAATCCTCTCCCGCAGTCAGGAAACAGGGCACGGGGTCCACTCTGGA  400

seq1  CCCTTCAAACCAGGGTGTACAATGCCATGGATACCCCTGTGACTTGCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCAAACCAGGGTGTACAATGCCATGGATACCCCTGTGACTTGCTCT  450

seq1  ATCCAATTTGTCCCACAAAGAAGTCCTTTTATATCCAAGACCTTGTCCGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAATTTGTCCCACAAAGAAGTCCTTTTATATCCAAGACCTTGTCCGA  500

seq1  AGTACCACAGGAAGCGCAGGAGTGAACCTCTGCATCTCCTCTTGAGCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCACAGGAAGCGCAGGAGTGAACCTCTGCATCTCCTCTTGAGCAGT  550

seq1  GCTGACTCCCCAAATGGGACCACAAGCCTTAGATATGGATGTTTATGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTCCCCAAATGGGACCACAAGCCTTAGATATGGATGTTTATGGAA  600

seq1  CCAACCGTCCCTAAAGGAAATGTTGGCCTCATATTAAGAAGGAGTAGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCGTCCCTAAAGGAAATGTTGGCCTCATATTAAGAAGGAGTAGTGC  650

seq1  CATGATGAGGGAAATAAGAATTTTACCTGGGGTATAGATGCTGATTTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGAGGGAAATAAGAATTTTACCTGGGGTATAGATGCTGATTTTTC  700

seq1  TGGAGAACTTAAAATTATGGTTAGTGCAGAAAGCAGAGTTGTTATTATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAACTTAAAATTATGGTTAGTGCAGAAAGCAGAGTTGTTATTATTC  750

seq1  CTCAGGGGTATAGAATACCACAATTGATTTTATTACCCATGTGTCTTAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGGTATAGAATACCACAATTGATTTTATTACCCATGTGTCTTAGT  800

seq1  CAGGGTTTCTATTCCTGCACAAACATCATGACCAAGAAGCAAGTTGGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTTCTATTCCTGCACAAACATCATGACCAAGAAGCAAGTTGGGGA  850

seq1  GGAAAGGGTTTATTTGGCTTATACTTCCATACTGCTGTTCATCACCAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGGTTTATTTGGCTTATACTTCCATACTGCTGTTCATCACCAAAG  900

seq1  GATGTCAGGACTGGAACTCAAGCAGGTCAGGAATCAGGAGCTGTTGCAGA  950
      ||||||| ||||||||||||||||||||| |||||| |||||||||||||
seq2  GATGTCA-GACTGGAACTCAAGCAGGTCA-GAATCA-GAGCTGTTGCAGA  947

seq1  GGCCATAAAGGGATGTTCTTTACTGGCT  978
      ||||||||||||||||||||||||||||
seq2  GGCCATAAAGGGATGTTCTTTACTGGCT  975