BAC Information

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BAC

Clone NameB6Ng01-073D18
ChromosomeX (Build37)
Map Location 162,607,108 - 162,608,235
singlet/doubletsinglet
Overlap genenone
Upstream geneGlra2, LOC100040753
Downstream geneGemin8, Gpm6b, Ofd1, Trappc2, Rab9, LOC100040795, A630018P17Rik, Egfl6, LOC100041912, LOC641660, LOC667791, EG667794, LOC100040850, LOC627268
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073D18.bB6Ng01-073D18.g
ACCDH890426DH890427
length4491,121
definitionDH890426|Mus musculus domesticus DNA, BAC clone: B6Ng01-073D18, 5' end.DH890427|Mus musculus domesticus DNA, BAC clone: B6Ng01-073D18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
acagagactatggtggcagcatacacaagtccatggcagacagggcctca
aagatgagacaggagtagacacaagccccatctttaacctaggaactacc
ggtgtcaattgcttacaaaggaaaaatcagttttctctcatgaatatata
tcataatttgaatgaaaatgacccctatgggctcatagggagtggcccta
tttgaaatcattagggcacatgaccttgctggaatacctgtggtcttgat
ggaggaagtatgacacttggctttgaggtttaaaatactcaaacaaagct
cagtgcctctctctccctctccctctccctctccctctccctctccctct
ccctctccctttcacttacacttatacttataccgataccgatgccggcg
ctgttttgggcgttgtctatcccgacggcgttggtgatcttgaacgtga

tttgtttgggcggtcccggcagctagctattgggcactaggggatcagaa
ctgaattgcaccctcagctttcggttattattattattatttcttcttta
gcttttactttcttttcactttcttaactaaaatggaaggtgagaaattg
ttttgaaaatacagattcactcagatctgtgtcagcttgacatttatgaa
ccttaatttgtacctagtgtttctgtcattataatcgtcagcagtacatg
cccttctagagttgcacaagagtccttagtaaccaaagatgaactactag
aaggccaagtgggcttatttggcaaaatgtgccatattttgcaggaattt
attactaggaaaaccagatttggaccagatgcatggttattccaaaaagt
gaaaataggaaacaatttaaatgccaaaggctaagataattaggcaatgt
cagtagtgggacattattaccttatcattcctgtaatattggtgaatcaa
agtagtataaaagaatatttagcaaacatataccagatgtctactatatg
ctaagtatctgcagtgtcttgtagcttcaaggcacacgtgattttgaggt
acttaaatgtgagaattttcgatgtgcttaactaaattccacagtacatt
ttaaagagttaatattgaaaaaaaaatacgtgaactgtctagttgttgtt
gacactgtctcactttcagctgggtcgaaggtcatcatcttgccctggct
ggtttgaattcccagagatccaccggtctcttgactgttgggattacagg
cacgcgtatcaacaagcctgccttaactaactcacattttaagcaatctt
aacctggcagtggtgtagcttcattgatagaatgtttgtccagcatgaat
gatgcgctggatcattcctttataacatctcacatctgggcatattggcg
catctgtaatcctaagaatcctgggcatgggagcaaggtgttgtggctac
ccagtgaatctgaggtcacctggggatgcatgaagctgtttgaggaaaaa
aaaatcctcgcctttaggaagagaatttaccttaatgagaagtaatgaat
tccagtacacattttaaattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_162607108_162608235
seq2: B6Ng01-073D18.g_73_1193 (reverse)

seq1  AAATATTAAAATATGTACATGGAATTCATTTTACTCTTCATTTAAGGTAA  50
      |||| ||||||| ||||| |||||||||  |||||  ||| |||||||||
seq2  AAAT-TTAAAATGTGTAC-TGGAATTCA--TTACTTCTCA-TTAAGGTAA  45

seq1  ATTCTCCTTCCCTAAGGCAAGGATTTTTTTTTTCCTCAAACAGCTTCATG  100
      ||||| |||||  ||||| |||| ||||||||||||||||||||||||||
seq2  ATTCT-CTTCCTAAAGGCGAGGA-TTTTTTTTTCCTCAAACAGCTTCATG  93

seq1  CATCCCAGGTTGACCTCAGATTCACTGTGTAGCCACAACAACCTTGCTTC  150
      ||||||  | ||||||||||||||||| ||||||||||| |||||||| |
seq2  CATCCCCAGGTGACCTCAGATTCACTGGGTAGCCACAAC-ACCTTGCTCC  142

seq1  CATGCCCAGAATTC-TAGGATTACAGATGCGCCAATATGCCCAGATGTGA  199
      ||||||||| |||| |||||||||||||||||||||||||||||||||||
seq2  CATGCCCAGGATTCTTAGGATTACAGATGCGCCAATATGCCCAGATGTGA  192

seq1  GATGTTATAAAGGAATGATCCAGCGCATCATTCATGCTGGACAAACATTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTATAAAGGAATGATCCAGCGCATCATTCATGCTGGACAAACATTC  242

seq1  TATCAATGAAGCTACACCACTGCCAGGTTAAGATTGCTTAAAATGTGAGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATGAAGCTACACCACTGCCAGGTTAAGATTGCTTAAAATGTGAGT  292

seq1  TAGTTAAGGCAGGCTTGTTGATACGCGTGCCTGTAATCCCAACAGTCAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAAGGCAGGCTTGTTGATACGCGTGCCTGTAATCCCAACAGTCAAG  342

seq1  AGACCGGTGGATCTCTGGGAATTCAAACCAGCCAGGGCAAGATGATGACC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCGGTGGATCTCTGGGAATTCAAACCAGCCAGGGCAAGATGATGACC  392

seq1  TTCGACCCAGCTGAAAGTGAGACAGTGTCAACAACAACTAGACAGTTCAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGACCCAGCTGAAAGTGAGACAGTGTCAACAACAACTAGACAGTTCAC  442

seq1  GTATTTTTTTTTCAATATTAACTCTTTAAAATGTACTGTGGAATTTAGTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTTTTTTCAATATTAACTCTTTAAAATGTACTGTGGAATTTAGTT  492

seq1  AAGCACATCGAAAATTCTCACATTTAAGTACCTCAAAATCACGTGTGCCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACATCGAAAATTCTCACATTTAAGTACCTCAAAATCACGTGTGCCT  542

seq1  TGAAGCTACAAGACACTGCAGATACTTAGCATATAGTAGACATCTGGTAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTACAAGACACTGCAGATACTTAGCATATAGTAGACATCTGGTAT  592

seq1  ATGTTTGCTAAATATTCTTTTATACTACTTTGATTCACCAATATTACAGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGCTAAATATTCTTTTATACTACTTTGATTCACCAATATTACAGG  642

seq1  AATGATAAGGTAATAATGTCCCACTACTGACATTGCCTAATTATCTTAGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATAAGGTAATAATGTCCCACTACTGACATTGCCTAATTATCTTAGC  692

seq1  CTTTGGCATTTAAATTGTTTCCTATTTTCACTTTTTGGAATAACCATGCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGCATTTAAATTGTTTCCTATTTTCACTTTTTGGAATAACCATGCA  742

seq1  TCTGGTCCAAATCTGGTTTTCCTAGTAATAAATTCCTGCAAAATATGGCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTCCAAATCTGGTTTTCCTAGTAATAAATTCCTGCAAAATATGGCA  792

seq1  CATTTTGCCAAATAAGCCCACTTGGCCTTCTAGTAGTTCATCTTTGGTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGCCAAATAAGCCCACTTGGCCTTCTAGTAGTTCATCTTTGGTTA  842

seq1  CTAAGGACTCTTGTGCAACTCTAGAAGGGCATGTACTGCTGACGATTATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGACTCTTGTGCAACTCTAGAAGGGCATGTACTGCTGACGATTATA  892

seq1  ATGACAGAAACACTAGGTACAAATTAAGGTTCATAAATGTCAAGCTGACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGAAACACTAGGTACAAATTAAGGTTCATAAATGTCAAGCTGACA  942

seq1  CAGATCTGAGTGAATCTGTATTTTCAAAACAATTTCTCACCTTCCATTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTGAGTGAATCTGTATTTTCAAAACAATTTCTCACCTTCCATTTT  992

seq1  AGTTAAGAAAGTGAAAAGAAAGTAAAAGCTAAAGAAGAAATAATAATAAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAGAAAGTGAAAAGAAAGTAAAAGCTAAAGAAGAAATAATAATAAT  1042

seq1  AATAACCGAAAGCTGAGGGTGCAATTCAGTTCTGATCCCCTAGTGCCCAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCGAAAGCTGAGGGTGCAATTCAGTTCTGATCCCCTAGTGCCCAA  1092

seq1  TAGCTAGCTGCCGGGACCGCCCAAACAAA  1128
      |||||||||||||||||||||||||||||
seq2  TAGCTAGCTGCCGGGACCGCCCAAACAAA  1121


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